RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
SMARCA4-216ENST00000591545 STAB2Q8WWQ8 2551 aa7.93□□□□□ -1.14
SMARCA4-216ENST00000591545 APCP25054 2843 aa7.92□□□□□ -1.14
SMARCA4-216ENST00000591545 SMG1Q96Q15 3661 aaKnown RBP7.91□□□□□ -1.14
SMARCA4-216ENST00000591545 A0A0A0MQY5 61 aa7.9□□□□□ -1.14
SMARCA4-216ENST00000591545 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.14
SMARCA4-216ENST00000591545 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
SMARCA4-216ENST00000591545 CRYBG3Q68DQ2 2970 aa7.89□□□□□ -1.15
SMARCA4-216ENST00000591545 DCHS2Q6V1P9 2916 aa7.88□□□□□ -1.15
SMARCA4-216ENST00000591545 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
SMARCA4-216ENST00000591545 ROMO1P60602 79 aa7.87□□□□□ -1.15
SMARCA4-216ENST00000591545 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
SMARCA4-216ENST00000591545 PANO1I0J062 215 aa7.86□□□□□ -1.15
SMARCA4-216ENST00000591545 R4GN34 69 aa7.86□□□□□ -1.15
SMARCA4-216ENST00000591545 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
SMARCA4-216ENST00000591545 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
SMARCA4-216ENST00000591545 ASH1LQ9NR48 2969 aaKnown RBP7.82□□□□□ -1.16
SMARCA4-216ENST00000591545 HIVEP1P15822 2718 aa7.82□□□□□ -1.16
SMARCA4-216ENST00000591545 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
SMARCA4-216ENST00000591545 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
SMARCA4-216ENST00000591545 Q6ZRN7 208 aaPredicted RBP7.8□□□□□ -1.16
SMARCA4-216ENST00000591545 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
SMARCA4-216ENST00000591545 TENM4Q6N022 2769 aa7.77□□□□□ -1.17
SMARCA4-216ENST00000591545 FBN2P35556 2912 aa7.76□□□□□ -1.17
SMARCA4-216ENST00000591545 A0A087X002 238 aa7.75□□□□□ -1.17
SMARCA4-216ENST00000591545 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
SMARCA4-216ENST00000591545 NF1P21359 2839 aa7.73□□□□□ -1.17
SMARCA4-216ENST00000591545 A6NN06 94 aa7.71□□□□□ -1.17
SMARCA4-216ENST00000591545 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.18
SMARCA4-216ENST00000591545 M0QZ58 72 aa7.7□□□□□ -1.18
SMARCA4-216ENST00000591545 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
SMARCA4-216ENST00000591545 BSNQ9UPA5 3926 aa7.68□□□□□ -1.18
SMARCA4-216ENST00000591545 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
SMARCA4-216ENST00000591545 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.18
SMARCA4-216ENST00000591545 CELSR1Q9NYQ6 3014 aa7.61□□□□□ -1.19
SMARCA4-216ENST00000591545 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
SMARCA4-216ENST00000591545 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.192e-8■□□□□ 11.1
SMARCA4-216ENST00000591545 KRTAP11-1Q8IUC1 163 aa7.58□□□□□ -1.2
SMARCA4-216ENST00000591545 NOTCH2NLQ7Z3S9 236 aa7.57□□□□□ -1.2
SMARCA4-216ENST00000591545 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
SMARCA4-216ENST00000591545 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
SMARCA4-216ENST00000591545 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
SMARCA4-216ENST00000591545 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
SMARCA4-216ENST00000591545 KRTAP13-1Q8IUC0 172 aa7.49□□□□□ -1.21
SMARCA4-216ENST00000591545 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.22
SMARCA4-216ENST00000591545 PDZD2O15018 2839 aa7.45□□□□□ -1.22
SMARCA4-216ENST00000591545 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
SMARCA4-216ENST00000591545 A8MU10 97 aa7.4□□□□□ -1.22
SMARCA4-216ENST00000591545 A8MUU9 505 aa7.39□□□□□ -1.23
SMARCA4-216ENST00000591545 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
SMARCA4-216ENST00000591545 CSMD2Q7Z408 3487 aa7.38□□□□□ -1.23
SMARCA4-216ENST00000591545 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
SMARCA4-216ENST00000591545 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
SMARCA4-216ENST00000591545 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
SMARCA4-216ENST00000591545 CUBNO60494 3623 aa7.27□□□□□ -1.25
SMARCA4-216ENST00000591545 OTOGQ6ZRI0 2925 aa7.26□□□□□ -1.25
SMARCA4-216ENST00000591545 VWFP04275 2813 aa7.25□□□□□ -1.25
SMARCA4-216ENST00000591545 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
SMARCA4-216ENST00000591545 VPS13CQ709C8 3753 aa7.23□□□□□ -1.25
SMARCA4-216ENST00000591545 TNP1P09430 55 aa7.22□□□□□ -1.25
SMARCA4-216ENST00000591545 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
SMARCA4-216ENST00000591545 XP32Q5T750 250 aa7.17□□□□□ -1.26
SMARCA4-216ENST00000591545 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
SMARCA4-216ENST00000591545 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
SMARCA4-216ENST00000591545 TENM2Q9NT68 2774 aa7.16□□□□□ -1.26
SMARCA4-216ENST00000591545 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
SMARCA4-216ENST00000591545 FBN1P35555 2871 aaKnown RBP7.08□□□□□ -1.28
SMARCA4-216ENST00000591545 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
SMARCA4-216ENST00000591545 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
SMARCA4-216ENST00000591545 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SMARCA4-216ENST00000591545 ZNF469Q96JG9 3925 aaPredicted RBP7.01□□□□□ -1.29
SMARCA4-216ENST00000591545 H0YAA0 97 aa6.99□□□□□ -1.29
SMARCA4-216ENST00000591545 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SMARCA4-216ENST00000591545 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
SMARCA4-216ENST00000591545 P0C880 135 aa6.95□□□□□ -1.3
SMARCA4-216ENST00000591545 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
SMARCA4-216ENST00000591545 KRTAP10-10P60014 251 aa6.94□□□□□ -1.3
SMARCA4-216ENST00000591545 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
SMARCA4-216ENST00000591545 TGP01266 2768 aa6.82□□□□□ -1.32
SMARCA4-216ENST00000591545 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
SMARCA4-216ENST00000591545 HUWE1Q7Z6Z7 4374 aaKnown RBP6.75□□□□□ -1.33
SMARCA4-216ENST00000591545 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
SMARCA4-216ENST00000591545 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
SMARCA4-216ENST00000591545 MEGF8Q7Z7M0 2845 aa6.54□□□□□ -1.36
SMARCA4-216ENST00000591545 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
SMARCA4-216ENST00000591545 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
SMARCA4-216ENST00000591545 DNAH9Q9NYC9 4486 aa6.5□□□□□ -1.37
SMARCA4-216ENST00000591545 CSMD3Q7Z407 3707 aa6.46□□□□□ -1.38
SMARCA4-216ENST00000591545 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
SMARCA4-216ENST00000591545 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
SMARCA4-216ENST00000591545 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
SMARCA4-216ENST00000591545 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
SMARCA4-216ENST00000591545 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
SMARCA4-216ENST00000591545 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
SMARCA4-216ENST00000591545 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
SMARCA4-216ENST00000591545 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
SMARCA4-216ENST00000591545 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
SMARCA4-216ENST00000591545 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
SMARCA4-216ENST00000591545 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
SMARCA4-216ENST00000591545 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms