RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 J3QKU1 62 aa4.61□□□□□ -1.67
NEDD4L-229ENST00000590506 CHTF8P0CG12 524 aa4.6□□□□□ -1.67
NEDD4L-229ENST00000590506 TENM3Q9P273 2699 aa4.59□□□□□ -1.67
NEDD4L-229ENST00000590506 ZNF861PO60384 105 aa4.59□□□□□ -1.67
NEDD4L-229ENST00000590506 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
NEDD4L-229ENST00000590506 KRTAP10-11P60412 298 aa4.58□□□□□ -1.68
NEDD4L-229ENST00000590506 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
NEDD4L-229ENST00000590506 FBN1P35555 2871 aaKnown RBP4.58□□□□□ -1.68
NEDD4L-229ENST00000590506 INAFM1C9JVW0 142 aa4.57□□□□□ -1.68
NEDD4L-229ENST00000590506 NBEAL1Q6ZS30 2694 aa4.57□□□□□ -1.68
NEDD4L-229ENST00000590506 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
NEDD4L-229ENST00000590506 SPINK6Q6UWN8 80 aa4.55□□□□□ -1.68
NEDD4L-229ENST00000590506 FBN3Q75N90 2809 aa4.55□□□□□ -1.68
NEDD4L-229ENST00000590506 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
NEDD4L-229ENST00000590506 ROMO1P60602 79 aa4.53□□□□□ -1.68
NEDD4L-229ENST00000590506 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
NEDD4L-229ENST00000590506 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
NEDD4L-229ENST00000590506 KRTAP13-1Q8IUC0 172 aa4.52□□□□□ -1.69
NEDD4L-229ENST00000590506 ANAPC11Q9NYG5 84 aa4.51□□□□□ -1.69
NEDD4L-229ENST00000590506 ANK2Q01484 3957 aa4.5□□□□□ -1.69
NEDD4L-229ENST00000590506 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
NEDD4L-229ENST00000590506 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
NEDD4L-229ENST00000590506 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
NEDD4L-229ENST00000590506 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
NEDD4L-229ENST00000590506 PANO1I0J062 215 aa4.48□□□□□ -1.69
NEDD4L-229ENST00000590506 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
NEDD4L-229ENST00000590506 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
NEDD4L-229ENST00000590506 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
NEDD4L-229ENST00000590506 LINC00483Q53H64 154 aa4.46□□□□□ -1.69
NEDD4L-229ENST00000590506 IGLV5-52A0A0A0MRZ9 124 aa4.46□□□□□ -1.7
NEDD4L-229ENST00000590506 A8MUU9 505 aa4.45□□□□□ -1.7
NEDD4L-229ENST00000590506 SPINK1P00995 79 aa4.45□□□□□ -1.7
NEDD4L-229ENST00000590506 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
NEDD4L-229ENST00000590506 P0C880 135 aa4.45□□□□□ -1.7
NEDD4L-229ENST00000590506 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
NEDD4L-229ENST00000590506 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
NEDD4L-229ENST00000590506 NOTCH1P46531 2555 aa4.43□□□□□ -1.7
NEDD4L-229ENST00000590506 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
NEDD4L-229ENST00000590506 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
NEDD4L-229ENST00000590506 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
NEDD4L-229ENST00000590506 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
NEDD4L-229ENST00000590506 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
NEDD4L-229ENST00000590506 H0YAA0 97 aa4.42□□□□□ -1.7
NEDD4L-229ENST00000590506 CIRBP-AS1Q8TBR5 109 aa4.41□□□□□ -1.7
NEDD4L-229ENST00000590506 LYSTQ99698 3801 aa4.41□□□□□ -1.7
NEDD4L-229ENST00000590506 Q6ZSA8 131 aa4.4□□□□□ -1.7
NEDD4L-229ENST00000590506 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
NEDD4L-229ENST00000590506 DNAH9Q9NYC9 4486 aa4.38□□□□□ -1.71
NEDD4L-229ENST00000590506 LY6G6CO95867 125 aa4.38□□□□□ -1.71
NEDD4L-229ENST00000590506 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
NEDD4L-229ENST00000590506 Q8N1X5 172 aa4.37□□□□□ -1.71
NEDD4L-229ENST00000590506 SPACA4Q8TDM5 124 aa4.36□□□□□ -1.71
NEDD4L-229ENST00000590506 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
NEDD4L-229ENST00000590506 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
NEDD4L-229ENST00000590506 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
NEDD4L-229ENST00000590506 CMYA5Q8N3K9 4069 aa4.35□□□□□ -1.71
NEDD4L-229ENST00000590506 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
NEDD4L-229ENST00000590506 KRTAP24-1Q3LI83 254 aa4.34□□□□□ -1.72
NEDD4L-229ENST00000590506 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.72
NEDD4L-229ENST00000590506 APLNQ9ULZ1 77 aa4.33□□□□□ -1.72
NEDD4L-229ENST00000590506 A0A1B0GU33 70 aa4.33□□□□□ -1.72
NEDD4L-229ENST00000590506 DNAH3Q8TD57 4116 aa4.32□□□□□ -1.72
NEDD4L-229ENST00000590506 STAB2Q8WWQ8 2551 aa4.32□□□□□ -1.72
NEDD4L-229ENST00000590506 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
NEDD4L-229ENST00000590506 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
NEDD4L-229ENST00000590506 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
NEDD4L-229ENST00000590506 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
NEDD4L-229ENST00000590506 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
NEDD4L-229ENST00000590506 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
NEDD4L-229ENST00000590506 TGP01266 2768 aa4.29□□□□□ -1.72
NEDD4L-229ENST00000590506 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
NEDD4L-229ENST00000590506 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
NEDD4L-229ENST00000590506 K7ERS5 55 aa4.26□□□□□ -1.73
NEDD4L-229ENST00000590506 A0A087WTM6 91 aa4.26□□□□□ -1.73
NEDD4L-229ENST00000590506 NUPR2A6NF83 97 aa4.23□□□□□ -1.73
NEDD4L-229ENST00000590506 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
NEDD4L-229ENST00000590506 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
NEDD4L-229ENST00000590506 MGAM2Q2M2H8 2515 aa4.23□□□□□ -1.73
NEDD4L-229ENST00000590506 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
NEDD4L-229ENST00000590506 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
NEDD4L-229ENST00000590506 PLECQ15149 4684 aaKnown RBP4.21□□□□□ -1.74
NEDD4L-229ENST00000590506 DNAH17Q9UFH2 4485 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
NEDD4L-229ENST00000590506 HECTD4Q9Y4D8 3996 aa4.19□□□□□ -1.74
NEDD4L-229ENST00000590506 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
NEDD4L-229ENST00000590506 DYNC2H1Q8NCM8 4307 aaKnown RBP4.17□□□□□ -1.74
NEDD4L-229ENST00000590506 A0A0D9SG42 100 aa4.14□□□□□ -1.75
NEDD4L-229ENST00000590506 VPS13DQ5THJ4 4388 aa4.14□□□□□ -1.75
NEDD4L-229ENST00000590506 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
NEDD4L-229ENST00000590506 DMBT1Q9UGM3 2413 aaPredicted RBP4.11□□□□□ -1.75
NEDD4L-229ENST00000590506 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
NEDD4L-229ENST00000590506 KMT2AQ03164 3969 aa4.1□□□□□ -1.75
NEDD4L-229ENST00000590506 DNAH2Q9P225 4427 aa4.1□□□□□ -1.75
NEDD4L-229ENST00000590506 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
NEDD4L-229ENST00000590506 RYR3Q15413 4870 aa4.09□□□□□ -1.76
NEDD4L-229ENST00000590506 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms