RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 A0A1B0GVX0 72 aa6.5□□□□□ -1.37
SMAD4-205ENST00000588745 HCG22E2RYF7 251 aa6.5□□□□□ -1.37
SMAD4-205ENST00000588745 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
SMAD4-205ENST00000588745 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
SMAD4-205ENST00000588745 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
SMAD4-205ENST00000588745 PCP4P48539 62 aa6.49□□□□□ -1.37
SMAD4-205ENST00000588745 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
SMAD4-205ENST00000588745 MMP24-AS1A0A0U1RRL7 71 aa6.47□□□□□ -1.37
SMAD4-205ENST00000588745 WFDC13Q8IUB5 93 aa6.47□□□□□ -1.37
SMAD4-205ENST00000588745 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.37
SMAD4-205ENST00000588745 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.37
SMAD4-205ENST00000588745 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-205ENST00000588745 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-205ENST00000588745 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
SMAD4-205ENST00000588745 C8orf87E5RJ46 101 aa6.44□□□□□ -1.38
SMAD4-205ENST00000588745 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
SMAD4-205ENST00000588745 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
SMAD4-205ENST00000588745 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
SMAD4-205ENST00000588745 OXTP01178 125 aa6.43□□□□□ -1.38
SMAD4-205ENST00000588745 NOTCH2NLQ7Z3S9 236 aa6.42□□□□□ -1.38
SMAD4-205ENST00000588745 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
SMAD4-205ENST00000588745 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
SMAD4-205ENST00000588745 TMEM254Q8TBM7 123 aa6.41□□□□□ -1.38
SMAD4-205ENST00000588745 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
SMAD4-205ENST00000588745 COX7CP15954 63 aa6.39□□□□□ -1.39
SMAD4-205ENST00000588745 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
SMAD4-205ENST00000588745 LINC00313P59037 77 aa6.38□□□□□ -1.39
SMAD4-205ENST00000588745 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SMAD4-205ENST00000588745 UQCRQO14949 82 aa6.37□□□□□ -1.39
SMAD4-205ENST00000588745 CCDC179H3BU77 68 aa6.35□□□□□ -1.39
SMAD4-205ENST00000588745 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
SMAD4-205ENST00000588745 NDUFS5O43920 106 aa6.32□□□□□ -1.4
SMAD4-205ENST00000588745 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-205ENST00000588745 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
SMAD4-205ENST00000588745 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-205ENST00000588745 J3QL48 77 aa6.31□□□□□ -1.4
SMAD4-205ENST00000588745 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
SMAD4-205ENST00000588745 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
SMAD4-205ENST00000588745 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
SMAD4-205ENST00000588745 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
SMAD4-205ENST00000588745 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
SMAD4-205ENST00000588745 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
SMAD4-205ENST00000588745 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
SMAD4-205ENST00000588745 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
SMAD4-205ENST00000588745 H0Y9P7 68 aa6.26□□□□□ -1.41
SMAD4-205ENST00000588745 MP68P56378 58 aa6.26□□□□□ -1.41
SMAD4-205ENST00000588745 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
SMAD4-205ENST00000588745 SNURFQ9Y675 71 aa6.25□□□□□ -1.41
SMAD4-205ENST00000588745 H3BPC8 53 aa6.23□□□□□ -1.41
SMAD4-205ENST00000588745 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
SMAD4-205ENST00000588745 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
SMAD4-205ENST00000588745 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
SMAD4-205ENST00000588745 ZCCHC13Q8WW36 166 aaKnown RBP6.22□□□□□ -1.41
SMAD4-205ENST00000588745 A8MUU9 505 aa6.21□□□□□ -1.41
SMAD4-205ENST00000588745 PRR4Q16378 134 aa6.21□□□□□ -1.41
SMAD4-205ENST00000588745 Q5W150 140 aa6.21□□□□□ -1.41
SMAD4-205ENST00000588745 LINC00208Q96KT6 92 aa6.21□□□□□ -1.41
SMAD4-205ENST00000588745 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
SMAD4-205ENST00000588745 NDUFC1O43677 76 aa6.18□□□□□ -1.42
SMAD4-205ENST00000588745 Q75L30 129 aa6.18□□□□□ -1.42
SMAD4-205ENST00000588745 H7BZZ5 65 aa6.17□□□□□ -1.42
SMAD4-205ENST00000588745 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
SMAD4-205ENST00000588745 LOC101927531A0A1B0GV80 90 aa6.16□□□□□ -1.42
SMAD4-205ENST00000588745 XP32Q5T750 250 aa6.16□□□□□ -1.42
SMAD4-205ENST00000588745 TMEM258P61165 79 aa6.13□□□□□ -1.43
SMAD4-205ENST00000588745 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
SMAD4-205ENST00000588745 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
SMAD4-205ENST00000588745 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
SMAD4-205ENST00000588745 LPAP08519 4548 aa6.09□□□□□ -1.43
SMAD4-205ENST00000588745 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
SMAD4-205ENST00000588745 FAM236DA0A1B0GTK5 79 aa6.08□□□□□ -1.44
SMAD4-205ENST00000588745 FAM236CP0DP71 79 aa6.08□□□□□ -1.44
SMAD4-205ENST00000588745 PCOTHQ58A44 107 aa6.08□□□□□ -1.44
SMAD4-205ENST00000588745 HERC1Q15751 4861 aa6.08□□□□□ -1.44
SMAD4-205ENST00000588745 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
SMAD4-205ENST00000588745 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
SMAD4-205ENST00000588745 LRP2P98164 4655 aa6.07□□□□□ -1.44
SMAD4-205ENST00000588745 C7orf65Q6ZTY9 151 aa6.06□□□□□ -1.44
SMAD4-205ENST00000588745 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-205ENST00000588745 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
SMAD4-205ENST00000588745 HRES1P13985 223 aa6.01□□□□□ -1.45
SMAD4-205ENST00000588745 SPINK7P58062 85 aa6□□□□□ -1.45
SMAD4-205ENST00000588745 MUC17Q685J3 4493 aa6□□□□□ -1.45
SMAD4-205ENST00000588745 LCE2BO14633 110 aa5.94□□□□□ -1.46
SMAD4-205ENST00000588745 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
SMAD4-205ENST00000588745 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
SMAD4-205ENST00000588745 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
SMAD4-205ENST00000588745 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
SMAD4-205ENST00000588745 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
SMAD4-205ENST00000588745 A8MUN3 132 aa5.87□□□□□ -1.47
SMAD4-205ENST00000588745 ACYP2P14621 99 aa5.87□□□□□ -1.47
SMAD4-205ENST00000588745 COA5Q86WW8 74 aa5.87□□□□□ -1.47
SMAD4-205ENST00000588745 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
SMAD4-205ENST00000588745 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
SMAD4-205ENST00000588745 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
SMAD4-205ENST00000588745 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
SMAD4-205ENST00000588745 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
SMAD4-205ENST00000588745 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
SMAD4-205ENST00000588745 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
SMAD4-205ENST00000588745 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms