RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TEP1Q99973 2627 aaKnown RBP2.18□□□□□ -2.06
VMP1-208ENST00000588617 F8VRH5 84 aa2.17□□□□□ -2.06
VMP1-208ENST00000588617 I3L3M4 83 aa2.17□□□□□ -2.06
VMP1-208ENST00000588617 IGLC3P0DOY3 106 aa2.17□□□□□ -2.06
VMP1-208ENST00000588617 PMCHL2Q9BQD1 86 aa2.17□□□□□ -2.06
VMP1-208ENST00000588617 UQCR10Q9UDW1 63 aa2.17□□□□□ -2.06
VMP1-208ENST00000588617 TRBV7-3A0A075B6L6 115 aa2.16□□□□□ -2.06
VMP1-208ENST00000588617 IGIPA6NJ69 53 aa2.16□□□□□ -2.06
VMP1-208ENST00000588617 RPL39LQ96EH5 51 aaKnown RBP2.16□□□□□ -2.06
VMP1-208ENST00000588617 F8P00451 2351 aa2.16□□□□□ -2.06
VMP1-208ENST00000588617 CMYA5Q8N3K9 4069 aa2.16□□□□□ -2.06
VMP1-208ENST00000588617 PKD1L1Q8TDX9 2849 aa2.15□□□□□ -2.06
VMP1-208ENST00000588617 JMJD1CQ15652 2540 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 COX8AP10176 69 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 HTN1P15515 57 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 SEC11AP67812 179 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 HIGD1BQ9P298 99 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 WNK1Q9H4A3 2382 aa2.15□□□□□ -2.07
VMP1-208ENST00000588617 H3BNG1 76 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 M0R143 59 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 UBE2D3P61077 147 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 UBE2D2P62837 147 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 AMELXQ99217 191 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 PRO1933Q9H354 126 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 NOP10Q9NPE3 64 aaKnown RBP2.14□□□□□ -2.07
VMP1-208ENST00000588617 PRO0255Q9UI72 69 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 UBE2D4Q9Y2X8 147 aa2.14□□□□□ -2.07
VMP1-208ENST00000588617 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 CCL18P55774 89 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 RPL39P62891 51 aaKnown RBP2.13□□□□□ -2.07
VMP1-208ENST00000588617 SPAG11BQ08648 103 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 COL5A1-AS1Q5SY13 56 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 SPAG11AQ6PDA7 123 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 COL6A5A8TX70 2615 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 NBEAL1Q6ZS30 2694 aa2.13□□□□□ -2.07
VMP1-208ENST00000588617 STAB1Q9NY15 2570 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 TRBV25-1A0A075B6N4 114 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 GVQW2A0A096LPI5 108 aaPredicted RBP2.12□□□□□ -2.07
VMP1-208ENST00000588617 TMEM262E9PQX1 116 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 DEFB135Q30KP9 77 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 SFTA2Q6UW10 78 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 SNHG12Q9BXW3 62 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 NBEAL2Q6ZNJ1 2754 aa2.12□□□□□ -2.07
VMP1-208ENST00000588617 PLECQ15149 4684 aaKnown RBP2.11□□□□□ -2.07
VMP1-208ENST00000588617 MYMXA0A1B0GTQ4 84 aa2.11□□□□□ -2.07
VMP1-208ENST00000588617 DEFB130BP0DP73 79 aa2.11□□□□□ -2.07
VMP1-208ENST00000588617 DEFB130AP0DP74 79 aa2.11□□□□□ -2.07
VMP1-208ENST00000588617 CDC42SE2Q9NRR3 84 aa2.11□□□□□ -2.07
VMP1-208ENST00000588617 DNAH9Q9NYC9 4486 aa2.11□□□□□ -2.07
VMP1-208ENST00000588617 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
VMP1-208ENST00000588617 ZNF815PA8K554 130 aa2.1□□□□□ -2.07
VMP1-208ENST00000588617 BVES-AS1Q5T3Y7 98 aa2.1□□□□□ -2.07
VMP1-208ENST00000588617 TMEM170BQ5T4T1 132 aa2.1□□□□□ -2.07
VMP1-208ENST00000588617 LELP1Q5T871 98 aa2.1□□□□□ -2.07
VMP1-208ENST00000588617 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.07
VMP1-208ENST00000588617 A0A0D9SG42 100 aa2.09□□□□□ -2.07
VMP1-208ENST00000588617 CDKN2A-AS1Q9UH64 79 aa2.09□□□□□ -2.07
VMP1-208ENST00000588617 MGAM2Q2M2H8 2515 aa2.09□□□□□ -2.08
VMP1-208ENST00000588617 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.08
VMP1-208ENST00000588617 A0A096LPF7 62 aa2.08□□□□□ -2.08
VMP1-208ENST00000588617 LINC00959A0A1B0GUT2 108 aa2.08□□□□□ -2.08
VMP1-208ENST00000588617 NDUFA1O15239 70 aa2.08□□□□□ -2.08
VMP1-208ENST00000588617 PRR15LQ9BU68 103 aa2.08□□□□□ -2.08
VMP1-208ENST00000588617 DNAH1Q9P2D7 4330 aa2.08□□□□□ -2.08
VMP1-208ENST00000588617 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
VMP1-208ENST00000588617 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
VMP1-208ENST00000588617 DEFB131BA0A096LNP1 70 aa2.07□□□□□ -2.08
VMP1-208ENST00000588617 SMIM13P0DJ93 91 aa2.07□□□□□ -2.08
VMP1-208ENST00000588617 Q8IZM0 81 aa2.07□□□□□ -2.08
VMP1-208ENST00000588617 DEFB4AO15263 64 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 COX6A2Q02221 97 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 COX17Q14061 63 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 LINC01556Q5JQF7 62 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 DEFB104AQ8WTQ1 72 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
VMP1-208ENST00000588617 COL7A1Q02388 2944 aa2.05□□□□□ -2.08
VMP1-208ENST00000588617 HTN3P15516 51 aa2.05□□□□□ -2.08
VMP1-208ENST00000588617 Q6ZRX8 168 aa2.05□□□□□ -2.08
VMP1-208ENST00000588617 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
VMP1-208ENST00000588617 PRKDCP78527 4128 aaKnown RBP2.05□□□□□ -2.08
VMP1-208ENST00000588617 STAB2Q8WWQ8 2551 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 H3BUT2 72 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 K7EP34 96 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 DEFB121Q5J5C9 76 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 ENHOQ6UWT2 76 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 LYSTQ99698 3801 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 TENM3Q9P273 2699 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 CSMD3Q7Z407 3707 aa2.04□□□□□ -2.08
VMP1-208ENST00000588617 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 COX6CP09669 75 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 WFDC10BQ8IUB3 73 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 LINC01600Q96MT4 127 aa2.03□□□□□ -2.08
VMP1-208ENST00000588617 SPCS1Q9Y6A9 102 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms