RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 COL6A5A8TX70 2615 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 TNRC18O15417 2968 aaPredicted RBP0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 SPG11Q96JI7 2443 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 NF1P21359 2839 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 H3BNG1 76 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 ITPR3Q14573 2671 aa0.69□□□□□ -2.3
NEDD4L-212ENST00000585594 SRCAPQ6ZRS2 3230 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 ACANP16112 2415 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 CHD8Q9HCK8 2581 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 CFAP46Q8IYW2 2715 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 CHD9Q3L8U1 2897 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 NIPBLQ6KC79 2804 aaeCLIP0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 KRTAP9-6A8MVA2 160 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 TNP1P09430 55 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 HTN3P15516 51 aa0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 TLN1Q9Y490 2541 aaKnown RBP0.68□□□□□ -2.3
NEDD4L-212ENST00000585594 NBEAQ8NFP9 2946 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 DEFB135Q30KP9 77 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 KRTAP6-3Q3LI67 103 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 KRTAP1-5Q9BYS1 174 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 LRBAP50851 2863 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 FLNCQ14315 2725 aa0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 USP9XQ93008 2570 aaPredicted RBP0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 GCN1Q92616 2671 aaKnown RBP0.67□□□□□ -2.3
NEDD4L-212ENST00000585594 SPTAN1Q13813 2472 aaKnown RBP0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 MYO18BQ8IUG5 2567 aa0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 APCP25054 2843 aa0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 KRTAP12-4P60329 112 aa0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 LCE3CQ5T5A8 94 aa0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 MTORP42345 2549 aa0.66□□□□□ -2.3
NEDD4L-212ENST00000585594 TEX15Q9BXT5 2789 aa0.65□□□□□ -2.3
NEDD4L-212ENST00000585594 TEP1Q99973 2627 aaKnown RBP0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 HIVEP1P15822 2718 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 ITPR2Q14571 2701 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 DOPEY1Q5JWR5 2465 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 CEP350Q5VT06 3117 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 DNAH11Q96DT5 4516 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 PRUNE2Q8WUY3 3088 aa0.65□□□□□ -2.31
NEDD4L-212ENST00000585594 NBEAL1Q6ZS30 2694 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 TGP01266 2768 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 FRYLO94915 3013 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 HTTP42858 3142 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 J3QKU1 62 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 DEFB4AO15263 64 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP10-5P60370 271 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 U3KQA8 63 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 AKAP9Q99996 3911 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 CSMD3Q7Z407 3707 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 UNC79Q9P2D8 2635 aa0.64□□□□□ -2.31
NEDD4L-212ENST00000585594 TRIOO75962 3097 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 NOTCH2Q04721 2471 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 VPS13DQ5THJ4 4388 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 ZFHX4Q86UP3 3567 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 TLN2Q9Y4G6 2542 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 CFAP54Q96N23 3096 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 C9orf92A6NGG3 77 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 KRTAP10-12P60413 245 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 TENM4Q6N022 2769 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 SETXQ7Z333 2677 aaKnown RBP0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 ACACBO00763 2458 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 CENPEQ02224 2701 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 CEP295Q9C0D2 2601 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 COL6A3P12111 3177 aa0.63□□□□□ -2.31
NEDD4L-212ENST00000585594 NBEAL2Q6ZNJ1 2754 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 ANKRD11Q6UB99 2663 aaPredicted RBP0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 DMDP11532 3685 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 NBPF19A0A087WUL8 3843 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 M0R2T5 61 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 RPS29P62273 56 aaKnown RBP0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 NSD1Q96L73 2696 aaPredicted RBP0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 MKI67P46013 3256 aaKnown RBP0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 STAB1Q9NY15 2570 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 FLNBO75369 2602 aaKnown RBP0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 MYO9AB2RTY4 2548 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 DMXL2Q8TDJ6 3036 aa0.62□□□□□ -2.31
NEDD4L-212ENST00000585594 PDZD2O15018 2839 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 CFAP47Q6ZTR5 3102 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 C5orf42Q9H799 3197 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 LCE3EQ5T5B0 92 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 ANK2Q01484 3957 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 ZZEF1O43149 2961 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 MAST4O15021 2626 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 FRYQ5TBA9 3013 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 MGAM2Q2M2H8 2515 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
NEDD4L-212ENST00000585594 NOTCH1P46531 2555 aa0.6□□□□□ -2.31
NEDD4L-212ENST00000585594 FLNAP21333 2647 aaKnown RBP0.6□□□□□ -2.31
NEDD4L-212ENST00000585594 DCHS2Q6V1P9 2916 aa0.6□□□□□ -2.31
NEDD4L-212ENST00000585594 ATMQ13315 3056 aa0.6□□□□□ -2.31
NEDD4L-212ENST00000585594 VPS13AQ96RL7 3174 aa0.6□□□□□ -2.31
NEDD4L-212ENST00000585594 BOD1L1Q8NFC6 3051 aa0.59□□□□□ -2.31
NEDD4L-212ENST00000585594 COL12A1Q99715 3063 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms