RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MGAM2Q2M2H8 2515 aa-0.59□□□□□ -2.5
PPP4R1-227ENST00000583988 VPS13BQ7Z7G8 4022 aa-0.59□□□□□ -2.5
PPP4R1-227ENST00000583988 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
PPP4R1-227ENST00000583988 DNAH3Q8TD57 4116 aa-0.59□□□□□ -2.5
PPP4R1-227ENST00000583988 KALRNO60229 2985 aa-0.6□□□□□ -2.5
PPP4R1-227ENST00000583988 ANKRD36CQ5JPF3 1778 aa-0.6□□□□□ -2.5
PPP4R1-227ENST00000583988 RNF17Q9BXT8 1623 aaKnown RBP-0.6□□□□□ -2.5
PPP4R1-227ENST00000583988 NRAPQ86VF7 1730 aa-0.6□□□□□ -2.51
PPP4R1-227ENST00000583988 RRBP1Q9P2E9 1410 aaKnown RBP-0.6□□□□□ -2.51
PPP4R1-227ENST00000583988 H3BVH4 76 aa-0.6□□□□□ -2.51
PPP4R1-227ENST00000583988 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.6□□□□□ -2.51
PPP4R1-227ENST00000583988 DNHD1Q96M86 4753 aa-0.6□□□□□ -2.51
PPP4R1-227ENST00000583988 CD163L1Q9NR16 1453 aa-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 INO80Q9ULG1 1556 aaPredicted RBP-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 CCDC168Q8NDH2 2452 aa-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 LAMA2P24043 3122 aaKnown RBP-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 PKHD1L1Q86WI1 4243 aa-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 DEFB110Q30KQ9 67 aa-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 ENHOQ6UWT2 76 aa-0.61□□□□□ -2.51
PPP4R1-227ENST00000583988 BPTFQ12830 3046 aa-0.62□□□□□ -2.51
PPP4R1-227ENST00000583988 ETDCA0A1B0GVM5 59 aa-0.62□□□□□ -2.51
PPP4R1-227ENST00000583988 NHSQ6T4R5 1651 aa-0.62□□□□□ -2.51
PPP4R1-227ENST00000583988 LRRIQ1Q96JM4 1722 aa-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 PARP4Q9UKK3 1724 aaKnown RBP-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 RIF1Q5UIP0 2472 aaKnown RBP-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 CELSR3Q9NYQ7 3312 aa-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 ANK3Q12955 4377 aaKnown RBP-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 CRIP1P50238 77 aa-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 ABCA8O94911 1581 aa-0.63□□□□□ -2.51
PPP4R1-227ENST00000583988 ACACBO00763 2458 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 ITSN2Q9NZM3 1697 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 WT1-ASQ06250 92 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 MINOS1Q5TGZ0 78 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 USP9XQ93008 2570 aaPredicted RBP-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 VPS13DQ5THJ4 4388 aa-0.64□□□□□ -2.51
PPP4R1-227ENST00000583988 KIF1AQ12756 1690 aa-0.65□□□□□ -2.51
PPP4R1-227ENST00000583988 TOGARAM1Q9Y4F4 1720 aa-0.67□□□□□ -2.52
PPP4R1-227ENST00000583988 WDR87Q6ZQQ6 2873 aa-0.67□□□□□ -2.52
PPP4R1-227ENST00000583988 ATXN8Q156A1 80 aa-0.67□□□□□ -2.52
PPP4R1-227ENST00000583988 DEFB114Q30KQ6 69 aa-0.67□□□□□ -2.52
PPP4R1-227ENST00000583988 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
PPP4R1-227ENST00000583988 H3BUA1 57 aa-0.68□□□□□ -2.52
PPP4R1-227ENST00000583988 NIPBLQ6KC79 2804 aaeCLIP-0.68□□□□□ -2.52
PPP4R1-227ENST00000583988 RPS27P42677 84 aaKnown RBP-0.69□□□□□ -2.52
PPP4R1-227ENST00000583988 RPS27LQ71UM5 84 aaKnown RBP-0.69□□□□□ -2.52
PPP4R1-227ENST00000583988 MYO5CQ9NQX4 1742 aa-0.69□□□□□ -2.52
PPP4R1-227ENST00000583988 C6orf48Q9UBA6 75 aa-0.7□□□□□ -2.52
PPP4R1-227ENST00000583988 C3P01024 1663 aa-0.7□□□□□ -2.52
PPP4R1-227ENST00000583988 DNAH11Q96DT5 4516 aa-0.7□□□□□ -2.52
PPP4R1-227ENST00000583988 APOBP04114 4563 aaKnown RBP-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 MROH1Q8NDA8 1641 aa-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 MMP24-AS1A0A0U1RRL7 71 aa-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 FCER1GP30273 86 aa-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 NOP10Q9NPE3 64 aaKnown RBP-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 GNG13Q9P2W3 67 aa-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 CDC42BPGQ6DT37 1551 aa-0.71□□□□□ -2.52
PPP4R1-227ENST00000583988 ABCC6O95255 1503 aa-0.72□□□□□ -2.52
PPP4R1-227ENST00000583988 IGLV5-48A0A075B6I7 105 aa-0.72□□□□□ -2.52
PPP4R1-227ENST00000583988 DIP2AQ14689 1571 aa-0.72□□□□□ -2.52
PPP4R1-227ENST00000583988 DNMBPQ6XZF7 1577 aa-0.72□□□□□ -2.52
PPP4R1-227ENST00000583988 DNAH1Q9P2D7 4330 aa-0.72□□□□□ -2.53
PPP4R1-227ENST00000583988 TNP1P09430 55 aa-0.73□□□□□ -2.53
PPP4R1-227ENST00000583988 KRTAP19-6Q3LI70 58 aa-0.73□□□□□ -2.53
PPP4R1-227ENST00000583988 TLN2Q9Y4G6 2542 aa-0.73□□□□□ -2.53
PPP4R1-227ENST00000583988 TRIOO75962 3097 aa-0.73□□□□□ -2.53
PPP4R1-227ENST00000583988 COL12A1Q99715 3063 aa-0.73□□□□□ -2.53
PPP4R1-227ENST00000583988 DUOX2Q9NRD8 1548 aa-0.74□□□□□ -2.53
PPP4R1-227ENST00000583988 UGGT2Q9NYU1 1516 aa-0.74□□□□□ -2.53
PPP4R1-227ENST00000583988 SCRIBQ14160 1630 aa-0.74□□□□□ -2.53
PPP4R1-227ENST00000583988 A0A0C4DFX4 3053 aa-0.74□□□□□ -2.53
PPP4R1-227ENST00000583988 HILPDAQ9Y5L2 63 aa-0.74□□□□□ -2.53
PPP4R1-227ENST00000583988 IQGAP3Q86VI3 1631 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 DEFB1P60022 68 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 MT1HP80294 61 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 SMCO4Q9NRQ5 59 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 RANBP2P49792 3224 aaKnown RBP-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 SACSQ9NZJ4 4579 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 LY75O60449 1722 aa-0.75□□□□□ -2.53
PPP4R1-227ENST00000583988 PDCD5O14737 125 aa-0.76□□□□□ -2.53
PPP4R1-227ENST00000583988 CLPSL2Q6UWE3 100 aa-0.76□□□□□ -2.53
PPP4R1-227ENST00000583988 ABCA9Q8IUA7 1624 aa-0.76□□□□□ -2.53
PPP4R1-227ENST00000583988 MADDQ8WXG6 1647 aa-0.77□□□□□ -2.53
PPP4R1-227ENST00000583988 SFTA3P0C7M3 94 aa-0.77□□□□□ -2.53
PPP4R1-227ENST00000583988 TEX15Q9BXT5 2789 aa-0.78□□□□□ -2.53
PPP4R1-227ENST00000583988 NCBP2-AS2Q69YL0 99 aa-0.78□□□□□ -2.53
PPP4R1-227ENST00000583988 CLASP1Q7Z460 1538 aa-0.79□□□□□ -2.54
PPP4R1-227ENST00000583988 ASXL1Q8IXJ9 1541 aa-0.79□□□□□ -2.54
PPP4R1-227ENST00000583988 K7EMI3 77 aa-0.79□□□□□ -2.54
PPP4R1-227ENST00000583988 FRYQ5TBA9 3013 aa-0.79□□□□□ -2.54
PPP4R1-227ENST00000583988 KRTAP19-5Q3LI72 72 aa-0.8□□□□□ -2.54
PPP4R1-227ENST00000583988 DNAH2Q9P225 4427 aa-0.81□□□□□ -2.54
PPP4R1-227ENST00000583988 MYO15AQ9UKN7 3530 aa-0.81□□□□□ -2.54
PPP4R1-227ENST00000583988 DNAH8Q96JB1 4490 aa-0.81□□□□□ -2.54
PPP4R1-227ENST00000583988 CDC42BPAQ5VT25 1732 aa-0.82□□□□□ -2.54
PPP4R1-227ENST00000583988 RELNP78509 3460 aa-0.83□□□□□ -2.54
PPP4R1-227ENST00000583988 LINC01549A6NIU2 74 aa-0.83□□□□□ -2.54
PPP4R1-227ENST00000583988 SERF2P84101 59 aa-0.83□□□□□ -2.54
PPP4R1-227ENST00000583988 LAMA3Q16787 3333 aa-0.83□□□□□ -2.54
PPP4R1-227ENST00000583988 ITPR2Q14571 2701 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms