RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 MAP1AP78559 2803 aaPredicted RBP7.22□□□□□ -1.25
CSNK1D-217ENST00000581241 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
CSNK1D-217ENST00000581241 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
CSNK1D-217ENST00000581241 STAB2Q8WWQ8 2551 aa7.18□□□□□ -1.26
CSNK1D-217ENST00000581241 IGSF10Q6WRI0 2623 aa7.17□□□□□ -1.26
CSNK1D-217ENST00000581241 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
CSNK1D-217ENST00000581241 NBEAQ8NFP9 2946 aa7.13□□□□□ -1.27
CSNK1D-217ENST00000581241 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
CSNK1D-217ENST00000581241 BAHCC1Q9P281 2608 aa7.09□□□□□ -1.27
CSNK1D-217ENST00000581241 APCP25054 2843 aa7.09□□□□□ -1.27
CSNK1D-217ENST00000581241 KALRNO60229 2985 aa7.09□□□□□ -1.27
CSNK1D-217ENST00000581241 FREM2Q5SZK8 3169 aa7.09□□□□□ -1.28
CSNK1D-217ENST00000581241 NSD1Q96L73 2696 aaPredicted RBP7.06□□□□□ -1.28
CSNK1D-217ENST00000581241 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
CSNK1D-217ENST00000581241 ATMQ13315 3056 aa7.05□□□□□ -1.28
CSNK1D-217ENST00000581241 BOD1L1Q8NFC6 3051 aa7.05□□□□□ -1.28
CSNK1D-217ENST00000581241 COL6A5A8TX70 2615 aa7.05□□□□□ -1.28
CSNK1D-217ENST00000581241 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
CSNK1D-217ENST00000581241 COL6A3P12111 3177 aa7.03□□□□□ -1.28
CSNK1D-217ENST00000581241 FRYLO94915 3013 aa7.02□□□□□ -1.29
CSNK1D-217ENST00000581241 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
CSNK1D-217ENST00000581241 LRBAP50851 2863 aa7.01□□□□□ -1.29
CSNK1D-217ENST00000581241 UBR5O95071 2799 aaPredicted RBP7.01□□□□□ -1.29
CSNK1D-217ENST00000581241 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
CSNK1D-217ENST00000581241 FLNCQ14315 2725 aa6.98□□□□□ -1.29
CSNK1D-217ENST00000581241 ITPR1Q14643 2758 aa6.96□□□□□ -1.3
CSNK1D-217ENST00000581241 COL12A1Q99715 3063 aa6.96□□□□□ -1.3
CSNK1D-217ENST00000581241 DMXL2Q8TDJ6 3036 aa6.94□□□□□ -1.3
CSNK1D-217ENST00000581241 USP34Q70CQ2 3546 aa6.93□□□□□ -1.3
CSNK1D-217ENST00000581241 ZZEF1O43149 2961 aa6.93□□□□□ -1.3
CSNK1D-217ENST00000581241 SPEGQ15772 3267 aa6.92□□□□□ -1.3
CSNK1D-217ENST00000581241 TACC2O95359 2948 aa6.91□□□□□ -1.3
CSNK1D-217ENST00000581241 MYO15AQ9UKN7 3530 aa6.9□□□□□ -1.31
CSNK1D-217ENST00000581241 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
CSNK1D-217ENST00000581241 UTP20O75691 2785 aaKnown RBP6.88□□□□□ -1.31
CSNK1D-217ENST00000581241 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
CSNK1D-217ENST00000581241 EYSQ5T1H1 3165 aa6.86□□□□□ -1.31
CSNK1D-217ENST00000581241 REV3LO60673 3130 aa6.85□□□□□ -1.31
CSNK1D-217ENST00000581241 HIVEP1P15822 2718 aa6.81□□□□□ -1.32
CSNK1D-217ENST00000581241 TNRC18O15417 2968 aaPredicted RBP6.81□□□□□ -1.32
CSNK1D-217ENST00000581241 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
CSNK1D-217ENST00000581241 INE1O15225 51 aa6.78□□□□□ -1.32
CSNK1D-217ENST00000581241 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
CSNK1D-217ENST00000581241 DMXL1Q9Y485 3027 aa6.75□□□□□ -1.33
CSNK1D-217ENST00000581241 HRNRQ86YZ3 2850 aaPredicted RBP6.73□□□□□ -1.33
CSNK1D-217ENST00000581241 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
CSNK1D-217ENST00000581241 ZANQ9Y493 2812 aa6.71□□□□□ -1.33
CSNK1D-217ENST00000581241 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
CSNK1D-217ENST00000581241 TGP01266 2768 aa6.65□□□□□ -1.34
CSNK1D-217ENST00000581241 CELSR2Q9HCU4 2923 aa6.65□□□□□ -1.34
CSNK1D-217ENST00000581241 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
CSNK1D-217ENST00000581241 CRYBG3Q68DQ2 2970 aa6.59□□□□□ -1.35
CSNK1D-217ENST00000581241 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
CSNK1D-217ENST00000581241 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
CSNK1D-217ENST00000581241 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
CSNK1D-217ENST00000581241 FBN2P35556 2912 aa6.55□□□□□ -1.36
CSNK1D-217ENST00000581241 NF1P21359 2839 aa6.5□□□□□ -1.37
CSNK1D-217ENST00000581241 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
CSNK1D-217ENST00000581241 ASPMQ8IZT6 3477 aa6.48□□□□□ -1.37
CSNK1D-217ENST00000581241 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
CSNK1D-217ENST00000581241 RELNP78509 3460 aa6.44□□□□□ -1.38
CSNK1D-217ENST00000581241 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
CSNK1D-217ENST00000581241 MXRA5Q9NR99 2828 aa6.41□□□□□ -1.38
CSNK1D-217ENST00000581241 ANK3Q12955 4377 aaKnown RBP6.41□□□□□ -1.38
CSNK1D-217ENST00000581241 ZFHX4Q86UP3 3567 aa6.39□□□□□ -1.39
CSNK1D-217ENST00000581241 CELSR1Q9NYQ6 3014 aa6.38□□□□□ -1.39
CSNK1D-217ENST00000581241 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
CSNK1D-217ENST00000581241 DMDP11532 3685 aa6.36□□□□□ -1.39
CSNK1D-217ENST00000581241 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
CSNK1D-217ENST00000581241 LAMA5O15230 3695 aa6.33□□□□□ -1.4
CSNK1D-217ENST00000581241 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
CSNK1D-217ENST00000581241 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CSNK1D-217ENST00000581241 DCHS1Q96JQ0 3298 aa6.32□□□□□ -1.4
CSNK1D-217ENST00000581241 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
CSNK1D-217ENST00000581241 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
CSNK1D-217ENST00000581241 TENM3Q9P273 2699 aa6.26□□□□□ -1.41
CSNK1D-217ENST00000581241 TENM1Q9UKZ4 2725 aa6.25□□□□□ -1.41
CSNK1D-217ENST00000581241 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
CSNK1D-217ENST00000581241 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
CSNK1D-217ENST00000581241 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.41
CSNK1D-217ENST00000581241 SMG1Q96Q15 3661 aaKnown RBP6.21□□□□□ -1.42
CSNK1D-217ENST00000581241 PDZD2O15018 2839 aa6.16□□□□□ -1.42
CSNK1D-217ENST00000581241 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
CSNK1D-217ENST00000581241 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
CSNK1D-217ENST00000581241 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
CSNK1D-217ENST00000581241 SVEP1Q4LDE5 3571 aa6.05□□□□□ -1.44
CSNK1D-217ENST00000581241 VWFP04275 2813 aa6.02□□□□□ -1.45
CSNK1D-217ENST00000581241 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
CSNK1D-217ENST00000581241 OTOGQ6ZRI0 2925 aa6□□□□□ -1.45
CSNK1D-217ENST00000581241 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
CSNK1D-217ENST00000581241 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
CSNK1D-217ENST00000581241 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
CSNK1D-217ENST00000581241 SPENQ96T58 3664 aaKnown RBP5.94□□□□□ -1.46
CSNK1D-217ENST00000581241 DNAH2Q9P225 4427 aa5.93□□□□□ -1.46
CSNK1D-217ENST00000581241 BSNQ9UPA5 3926 aa5.88□□□□□ -1.47
CSNK1D-217ENST00000581241 MEGF8Q7Z7M0 2845 aa5.85□□□□□ -1.47
CSNK1D-217ENST00000581241 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
CSNK1D-217ENST00000581241 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
CSNK1D-217ENST00000581241 CSMD2Q7Z408 3487 aa5.85□□□□□ -1.47
CSNK1D-217ENST00000581241 CUBNO60494 3623 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms