RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
RNU4ATAC-201ENST00000580972 SPAG11AQ6PDA7 123 aa3.44□□□□□ -1.86
RNU4ATAC-201ENST00000580972 IMUPQ9GZP8 106 aa3.44□□□□□ -1.86
RNU4ATAC-201ENST00000580972 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
RNU4ATAC-201ENST00000580972 J3KT08 172 aa3.43□□□□□ -1.86
RNU4ATAC-201ENST00000580972 OXTP01178 125 aa3.43□□□□□ -1.86
RNU4ATAC-201ENST00000580972 KRTAP29-1A8MX34 341 aaPredicted RBP3.42□□□□□ -1.86
RNU4ATAC-201ENST00000580972 HCG22E2RYF7 251 aa3.42□□□□□ -1.86
RNU4ATAC-201ENST00000580972 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
RNU4ATAC-201ENST00000580972 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
RNU4ATAC-201ENST00000580972 NDUFB1O75438 58 aa3.41□□□□□ -1.86
RNU4ATAC-201ENST00000580972 CASC2Q6XLA1 102 aa3.41□□□□□ -1.86
RNU4ATAC-201ENST00000580972 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
RNU4ATAC-201ENST00000580972 SCGB1A1P11684 91 aa3.4□□□□□ -1.87
RNU4ATAC-201ENST00000580972 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
RNU4ATAC-201ENST00000580972 hDV103S1A0JD37 113 aa3.39□□□□□ -1.87
RNU4ATAC-201ENST00000580972 J3QL48 77 aa3.39□□□□□ -1.87
RNU4ATAC-201ENST00000580972 LINC00313P59037 77 aa3.38□□□□□ -1.87
RNU4ATAC-201ENST00000580972 ANAPC13Q9BS18 74 aa3.38□□□□□ -1.87
RNU4ATAC-201ENST00000580972 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 PRR4Q16378 134 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 TMEM254Q8TBM7 123 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 OCR1Q9BZK8 76 aa3.37□□□□□ -1.87
RNU4ATAC-201ENST00000580972 ATOX1O00244 68 aa3.36□□□□□ -1.87
RNU4ATAC-201ENST00000580972 NDUFS5O43920 106 aa3.36□□□□□ -1.87
RNU4ATAC-201ENST00000580972 PCP4P48539 62 aa3.36□□□□□ -1.87
RNU4ATAC-201ENST00000580972 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
RNU4ATAC-201ENST00000580972 Q5W150 140 aa3.35□□□□□ -1.87
RNU4ATAC-201ENST00000580972 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
RNU4ATAC-201ENST00000580972 TRAV7A0A075B6U4 112 aa3.34□□□□□ -1.87
RNU4ATAC-201ENST00000580972 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
RNU4ATAC-201ENST00000580972 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
RNU4ATAC-201ENST00000580972 DMBT1Q9UGM3 2413 aaPredicted RBP3.34□□□□□ -1.87
RNU4ATAC-201ENST00000580972 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
RNU4ATAC-201ENST00000580972 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
RNU4ATAC-201ENST00000580972 COX7CP15954 63 aa3.32□□□□□ -1.88
RNU4ATAC-201ENST00000580972 XP32Q5T750 250 aa3.32□□□□□ -1.88
RNU4ATAC-201ENST00000580972 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC-201ENST00000580972 A8MUU9 505 aa3.31□□□□□ -1.88
RNU4ATAC-201ENST00000580972 H0Y9P7 68 aa3.31□□□□□ -1.88
RNU4ATAC-201ENST00000580972 UQCRQO14949 82 aa3.31□□□□□ -1.88
RNU4ATAC-201ENST00000580972 C20orf197Q8N268 126 aa3.31□□□□□ -1.88
RNU4ATAC-201ENST00000580972 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
RNU4ATAC-201ENST00000580972 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
RNU4ATAC-201ENST00000580972 SMIM20Q8N5G0 67 aa3.29□□□□□ -1.88
RNU4ATAC-201ENST00000580972 TRAV22A0A0B4J277 110 aa3.28□□□□□ -1.88
RNU4ATAC-201ENST00000580972 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC-201ENST00000580972 LINC00208Q96KT6 92 aa3.28□□□□□ -1.88
RNU4ATAC-201ENST00000580972 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
RNU4ATAC-201ENST00000580972 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
RNU4ATAC-201ENST00000580972 Q75L30 129 aa3.27□□□□□ -1.89
RNU4ATAC-201ENST00000580972 TP53AIP1Q9HCN2 124 aa3.27□□□□□ -1.89
RNU4ATAC-201ENST00000580972 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
RNU4ATAC-201ENST00000580972 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
RNU4ATAC-201ENST00000580972 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
RNU4ATAC-201ENST00000580972 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
RNU4ATAC-201ENST00000580972 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
RNU4ATAC-201ENST00000580972 LPAP08519 4548 aa3.25□□□□□ -1.89
RNU4ATAC-201ENST00000580972 MP68P56378 58 aa3.25□□□□□ -1.89
RNU4ATAC-201ENST00000580972 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
RNU4ATAC-201ENST00000580972 HERC1Q15751 4861 aa3.24□□□□□ -1.89
RNU4ATAC-201ENST00000580972 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
RNU4ATAC-201ENST00000580972 H7BZZ5 65 aa3.23□□□□□ -1.89
RNU4ATAC-201ENST00000580972 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
RNU4ATAC-201ENST00000580972 CYP4F30PQ9H0H9 118 aa3.22□□□□□ -1.89
RNU4ATAC-201ENST00000580972 LOC101927531A0A1B0GV80 90 aa3.21□□□□□ -1.9
RNU4ATAC-201ENST00000580972 ATP11AUNQ6ZP68 121 aa3.21□□□□□ -1.9
RNU4ATAC-201ENST00000580972 H3BPC8 53 aa3.2□□□□□ -1.9
RNU4ATAC-201ENST00000580972 SPINK7P58062 85 aa3.2□□□□□ -1.9
RNU4ATAC-201ENST00000580972 LRP2P98164 4655 aa3.19□□□□□ -1.9
RNU4ATAC-201ENST00000580972 HRES1P13985 223 aa3.19□□□□□ -1.9
RNU4ATAC-201ENST00000580972 C7orf65Q6ZTY9 151 aa3.19□□□□□ -1.9
RNU4ATAC-201ENST00000580972 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
RNU4ATAC-201ENST00000580972 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
RNU4ATAC-201ENST00000580972 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
RNU4ATAC-201ENST00000580972 C4orf26Q17RF5 130 aa3.17□□□□□ -1.9
RNU4ATAC-201ENST00000580972 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
RNU4ATAC-201ENST00000580972 NDUFC1O43677 76 aa3.15□□□□□ -1.91
RNU4ATAC-201ENST00000580972 TMEM258P61165 79 aa3.15□□□□□ -1.91
RNU4ATAC-201ENST00000580972 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
RNU4ATAC-201ENST00000580972 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
RNU4ATAC-201ENST00000580972 MPLKIPQ8TAP9 179 aa3.11□□□□□ -1.91
RNU4ATAC-201ENST00000580972 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
RNU4ATAC-201ENST00000580972 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
RNU4ATAC-201ENST00000580972 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
RNU4ATAC-201ENST00000580972 COA5Q86WW8 74 aa3.1□□□□□ -1.91
RNU4ATAC-201ENST00000580972 UBR4Q5T4S7 5183 aa3.1□□□□□ -1.91
RNU4ATAC-201ENST00000580972 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
RNU4ATAC-201ENST00000580972 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
RNU4ATAC-201ENST00000580972 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
RNU4ATAC-201ENST00000580972 ACYP2P14621 99 aa3.05□□□□□ -1.92
RNU4ATAC-201ENST00000580972 LCE2CQ5TA81 110 aa3.04□□□□□ -1.92
RNU4ATAC-201ENST00000580972 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
RNU4ATAC-201ENST00000580972 A8MUN3 132 aa3.03□□□□□ -1.92
RNU4ATAC-201ENST00000580972 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
RNU4ATAC-201ENST00000580972 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
RNU4ATAC-201ENST00000580972 LCA10Q71F78 164 aa3.03□□□□□ -1.92
RNU4ATAC-201ENST00000580972 RBM12B-AS1Q9P1G2 102 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms