RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ORMDL1Q9P0S3 153 aa5.81□□□□□ -1.48
GGA3-209ENST00000580646 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
GGA3-209ENST00000580646 H3BQ85 93 aa5.79□□□□□ -1.48
GGA3-209ENST00000580646 CXCL6P80162 114 aa5.79□□□□□ -1.48
GGA3-209ENST00000580646 C4orf48Q5BLP8 95 aa5.79□□□□□ -1.48
GGA3-209ENST00000580646 ST20-AS1Q8NBB2 130 aa5.79□□□□□ -1.48
GGA3-209ENST00000580646 NDUFS5O43920 106 aa5.78□□□□□ -1.48
GGA3-209ENST00000580646 Q1T7F1 81 aa5.78□□□□□ -1.48
GGA3-209ENST00000580646 PDE6GP18545 87 aa5.77□□□□□ -1.49
GGA3-209ENST00000580646 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
GGA3-209ENST00000580646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.77□□□□□ -1.49
GGA3-209ENST00000580646 SSBP3-AS1Q7Z2R9 100 aa5.77□□□□□ -1.49
GGA3-209ENST00000580646 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
GGA3-209ENST00000580646 TMEM256-PLSCR3K7ERE1 68 aa5.76□□□□□ -1.49
GGA3-209ENST00000580646 SPAG11AQ6PDA7 123 aa5.76□□□□□ -1.49
GGA3-209ENST00000580646 TRBV7-4A0A0J9YYF1 115 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 Q6ZQY7 126 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 Q8NBF4 154 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 LPAP08519 4548 aa5.75□□□□□ -1.49
GGA3-209ENST00000580646 Q8N377 158 aa5.74□□□□□ -1.49
GGA3-209ENST00000580646 MUC2Q02817 5179 aa5.74□□□□□ -1.49
GGA3-209ENST00000580646 IGLV9-49A0A0B4J1Y8 123 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 MOBPQ13875 183 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 PRR4Q16378 134 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 SMIM29Q86T20 159 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 DEFB105AQ8NG35 78 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
GGA3-209ENST00000580646 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
GGA3-209ENST00000580646 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
GGA3-209ENST00000580646 NREPQ16612 68 aa5.72□□□□□ -1.49
GGA3-209ENST00000580646 SNURFQ9Y675 71 aa5.72□□□□□ -1.49
GGA3-209ENST00000580646 SPINK1P00995 79 aa5.71□□□□□ -1.5
GGA3-209ENST00000580646 Q6ZVQ6 151 aa5.71□□□□□ -1.5
GGA3-209ENST00000580646 IGLV8-61A0A075B6I0 122 aa5.69□□□□□ -1.5
GGA3-209ENST00000580646 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
GGA3-209ENST00000580646 hDV103S1A0JD37 113 aa5.67□□□□□ -1.5
GGA3-209ENST00000580646 BPY2O14599 106 aa5.65□□□□□ -1.5
GGA3-209ENST00000580646 ATP11AUNQ6ZP68 121 aa5.64□□□□□ -1.51
GGA3-209ENST00000580646 Q6ZQT0 140 aa5.64□□□□□ -1.51
GGA3-209ENST00000580646 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
GGA3-209ENST00000580646 RETNLBQ9BQ08 111 aa5.63□□□□□ -1.51
GGA3-209ENST00000580646 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
GGA3-209ENST00000580646 IGFL1Q6UW32 110 aa5.62□□□□□ -1.51
GGA3-209ENST00000580646 NDUFB1O75438 58 aa5.61□□□□□ -1.51
GGA3-209ENST00000580646 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
GGA3-209ENST00000580646 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
GGA3-209ENST00000580646 LCA10Q71F78 164 aa5.6□□□□□ -1.51
GGA3-209ENST00000580646 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
GGA3-209ENST00000580646 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
GGA3-209ENST00000580646 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
GGA3-209ENST00000580646 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
GGA3-209ENST00000580646 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
GGA3-209ENST00000580646 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
GGA3-209ENST00000580646 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
GGA3-209ENST00000580646 C1orf64Q8NEQ6 169 aa5.55□□□□□ -1.52
GGA3-209ENST00000580646 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
GGA3-209ENST00000580646 A0A1B0GW54 56 aa5.54□□□□□ -1.52
GGA3-209ENST00000580646 C8orf87E5RJ46 101 aa5.54□□□□□ -1.52
GGA3-209ENST00000580646 PSPHP1O15172 72 aa5.54□□□□□ -1.52
GGA3-209ENST00000580646 A6NN06 94 aa5.53□□□□□ -1.52
GGA3-209ENST00000580646 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
GGA3-209ENST00000580646 H3BS24 57 aa5.52□□□□□ -1.53
GGA3-209ENST00000580646 Q75L30 129 aa5.52□□□□□ -1.53
GGA3-209ENST00000580646 CHKB-CPT1BH3BT56 60 aa5.51□□□□□ -1.53
GGA3-209ENST00000580646 Q5VV11 94 aa5.51□□□□□ -1.53
GGA3-209ENST00000580646 A8MUN3 132 aa5.5□□□□□ -1.53
GGA3-209ENST00000580646 IGKV4-1P06312 121 aa5.5□□□□□ -1.53
GGA3-209ENST00000580646 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
GGA3-209ENST00000580646 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
GGA3-209ENST00000580646 A0A087WSZ3 146 aa5.49□□□□□ -1.53
GGA3-209ENST00000580646 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
GGA3-209ENST00000580646 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
GGA3-209ENST00000580646 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
GGA3-209ENST00000580646 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
GGA3-209ENST00000580646 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
GGA3-209ENST00000580646 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
GGA3-209ENST00000580646 A6NED7 52 aa5.46□□□□□ -1.54
GGA3-209ENST00000580646 H3BPC8 53 aa5.46□□□□□ -1.54
GGA3-209ENST00000580646 Q96NJ1 140 aa5.45□□□□□ -1.54
GGA3-209ENST00000580646 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
GGA3-209ENST00000580646 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
GGA3-209ENST00000580646 MP68P56378 58 aa5.43□□□□□ -1.54
GGA3-209ENST00000580646 XP32Q5T750 250 aa5.42□□□□□ -1.54
GGA3-209ENST00000580646 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
GGA3-209ENST00000580646 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
GGA3-209ENST00000580646 CASC2Q6XLA1 102 aa5.41□□□□□ -1.54
GGA3-209ENST00000580646 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.54
GGA3-209ENST00000580646 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
GGA3-209ENST00000580646 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
GGA3-209ENST00000580646 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
GGA3-209ENST00000580646 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
GGA3-209ENST00000580646 RPL37P61927 97 aaKnown RBP5.33□□□□□ -1.56
GGA3-209ENST00000580646 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
GGA3-209ENST00000580646 Q8N9L7 120 aa5.33□□□□□ -1.56
GGA3-209ENST00000580646 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
GGA3-209ENST00000580646 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
GGA3-209ENST00000580646 A8MWP4 228 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms