RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
SKA2-205ENST00000580541 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
SKA2-205ENST00000580541 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
SKA2-205ENST00000580541 FAM240AA0A1B0GVK7 77 aa7.98□□□□□ -1.13
SKA2-205ENST00000580541 NDUFB1O75438 58 aa7.98□□□□□ -1.13
SKA2-205ENST00000580541 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
SKA2-205ENST00000580541 Q96NJ1 140 aa7.98□□□□□ -1.13
SKA2-205ENST00000580541 SIGMAR1Q99720 223 aa7.98□□□□□ -1.13
SKA2-205ENST00000580541 Q6ZVQ6 151 aa7.96□□□□□ -1.14
SKA2-205ENST00000580541 LINC00846Q9NV44 126 aa7.96□□□□□ -1.14
SKA2-205ENST00000580541 HERC1Q15751 4861 aa7.95□□□□□ -1.14
SKA2-205ENST00000580541 BPY2O14599 106 aa7.95□□□□□ -1.14
SKA2-205ENST00000580541 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
SKA2-205ENST00000580541 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
SKA2-205ENST00000580541 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
SKA2-205ENST00000580541 A8MWP4 228 aa7.91□□□□□ -1.14
SKA2-205ENST00000580541 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
SKA2-205ENST00000580541 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
SKA2-205ENST00000580541 LINC00313P59037 77 aa7.89□□□□□ -1.15
SKA2-205ENST00000580541 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
SKA2-205ENST00000580541 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
SKA2-205ENST00000580541 K7ERU9 68 aa7.88□□□□□ -1.15
SKA2-205ENST00000580541 CXCL6P80162 114 aa7.86□□□□□ -1.15
SKA2-205ENST00000580541 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
SKA2-205ENST00000580541 PRR15Q8IV56 129 aa7.86□□□□□ -1.15
SKA2-205ENST00000580541 KRTAP4-7Q9BYR0 210 aa7.86□□□□□ -1.15
SKA2-205ENST00000580541 DSCR10P59022 87 aa7.84□□□□□ -1.15
SKA2-205ENST00000580541 ATP5EP2Q5VTU8 51 aa7.84□□□□□ -1.15
SKA2-205ENST00000580541 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
SKA2-205ENST00000580541 LINC00643Q86TS7 51 aa7.83□□□□□ -1.16
SKA2-205ENST00000580541 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
SKA2-205ENST00000580541 K7EQZ3 153 aa7.79□□□□□ -1.16
SKA2-205ENST00000580541 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
SKA2-205ENST00000580541 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
SKA2-205ENST00000580541 Q75L30 129 aa7.76□□□□□ -1.17
SKA2-205ENST00000580541 hDV103S1A0JD37 113 aa7.75□□□□□ -1.17
SKA2-205ENST00000580541 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
SKA2-205ENST00000580541 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
SKA2-205ENST00000580541 Q8N9L7 120 aa7.74□□□□□ -1.17
SKA2-205ENST00000580541 C20orf166-AS1Q96NR2 134 aa7.74□□□□□ -1.17
SKA2-205ENST00000580541 LPAP08519 4548 aa7.73□□□□□ -1.17
SKA2-205ENST00000580541 RPL37P61927 97 aaKnown RBP7.73□□□□□ -1.17
SKA2-205ENST00000580541 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
SKA2-205ENST00000580541 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
SKA2-205ENST00000580541 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
SKA2-205ENST00000580541 A8MUU9 505 aa7.72□□□□□ -1.17
SKA2-205ENST00000580541 HIST1H4AP62805 103 aaKnown RBP7.72□□□□□ -1.17
SKA2-205ENST00000580541 CASC2Q6XLA1 102 aa7.72□□□□□ -1.17
SKA2-205ENST00000580541 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
SKA2-205ENST00000580541 HCG22E2RYF7 251 aa7.71□□□□□ -1.18
SKA2-205ENST00000580541 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
SKA2-205ENST00000580541 LRP2P98164 4655 aa7.69□□□□□ -1.18
SKA2-205ENST00000580541 Q8N9P0 234 aaPredicted RBP7.69□□□□□ -1.18
SKA2-205ENST00000580541 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
SKA2-205ENST00000580541 NDUFS5O43920 106 aa7.66□□□□□ -1.18
SKA2-205ENST00000580541 PCOTHQ58A44 107 aa7.64□□□□□ -1.19
SKA2-205ENST00000580541 IMUPQ9GZP8 106 aa7.64□□□□□ -1.19
SKA2-205ENST00000580541 TP53AIP1Q9HCN2 124 aa7.61□□□□□ -1.19
SKA2-205ENST00000580541 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
SKA2-205ENST00000580541 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
SKA2-205ENST00000580541 A0A087WVE0 104 aa7.55□□□□□ -1.2
SKA2-205ENST00000580541 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
SKA2-205ENST00000580541 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
SKA2-205ENST00000580541 KRTAP4-2Q9BYR5 136 aa7.51□□□□□ -1.21
SKA2-205ENST00000580541 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
SKA2-205ENST00000580541 UQCRQO14949 82 aa7.49□□□□□ -1.21
SKA2-205ENST00000580541 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
SKA2-205ENST00000580541 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
SKA2-205ENST00000580541 Q5W150 140 aa7.45□□□□□ -1.22
SKA2-205ENST00000580541 SMIM20Q8N5G0 67 aa7.45□□□□□ -1.22
SKA2-205ENST00000580541 SPINK7P58062 85 aa7.44□□□□□ -1.22
SKA2-205ENST00000580541 TRAV22A0A0B4J277 110 aa7.43□□□□□ -1.22
SKA2-205ENST00000580541 ATOX1O00244 68 aa7.43□□□□□ -1.22
SKA2-205ENST00000580541 FAM236AA0A1B0GUQ0 79 aa7.42□□□□□ -1.22
SKA2-205ENST00000580541 FAM236BA0A1B0GV22 79 aa7.42□□□□□ -1.22
SKA2-205ENST00000580541 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
SKA2-205ENST00000580541 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
SKA2-205ENST00000580541 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
SKA2-205ENST00000580541 OCR1Q9BZK8 76 aa7.41□□□□□ -1.22
SKA2-205ENST00000580541 MP68P56378 58 aa7.4□□□□□ -1.22
SKA2-205ENST00000580541 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
SKA2-205ENST00000580541 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
SKA2-205ENST00000580541 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
SKA2-205ENST00000580541 H0Y9P7 68 aa7.37□□□□□ -1.23
SKA2-205ENST00000580541 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
SKA2-205ENST00000580541 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
SKA2-205ENST00000580541 H3BPC8 53 aa7.35□□□□□ -1.23
SKA2-205ENST00000580541 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
SKA2-205ENST00000580541 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
SKA2-205ENST00000580541 MUC2Q02817 5179 aa7.32□□□□□ -1.24
SKA2-205ENST00000580541 H3BS24 57 aa7.32□□□□□ -1.24
SKA2-205ENST00000580541 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
SKA2-205ENST00000580541 HRES1P13985 223 aa7.31□□□□□ -1.24
SKA2-205ENST00000580541 FAM236DA0A1B0GTK5 79 aa7.3□□□□□ -1.24
SKA2-205ENST00000580541 FAM236CP0DP71 79 aa7.3□□□□□ -1.24
SKA2-205ENST00000580541 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
SKA2-205ENST00000580541 CYP4F30PQ9H0H9 118 aa7.3□□□□□ -1.24
SKA2-205ENST00000580541 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
SKA2-205ENST00000580541 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
SKA2-205ENST00000580541 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms