RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
CDK5RAP3-218ENST00000580391 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
CDK5RAP3-218ENST00000580391 A0A1B0GVX0 72 aa8.5□□□□□ -1.05
CDK5RAP3-218ENST00000580391 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
CDK5RAP3-218ENST00000580391 OCR1Q9BZK8 76 aa8.5□□□□□ -1.05
CDK5RAP3-218ENST00000580391 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
CDK5RAP3-218ENST00000580391 IGHV6-1A0A0B4J1U7 121 aa8.49□□□□□ -1.05
CDK5RAP3-218ENST00000580391 C1orf195Q5TG92 126 aa8.49□□□□□ -1.05
CDK5RAP3-218ENST00000580391 SPINK1P00995 79 aa8.48□□□□□ -1.05
CDK5RAP3-218ENST00000580391 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
CDK5RAP3-218ENST00000580391 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
CDK5RAP3-218ENST00000580391 TNXBP22105 4242 aa8.46□□□□□ -1.05
CDK5RAP3-218ENST00000580391 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
CDK5RAP3-218ENST00000580391 hDV103S1A0JD37 113 aa8.44□□□□□ -1.06
CDK5RAP3-218ENST00000580391 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
CDK5RAP3-218ENST00000580391 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-218ENST00000580391 Q8N1X5 172 aa8.42□□□□□ -1.06
CDK5RAP3-218ENST00000580391 C20orf197Q8N268 126 aa8.42□□□□□ -1.06
CDK5RAP3-218ENST00000580391 CYSTM1Q9H1C7 97 aa8.42□□□□□ -1.06
CDK5RAP3-218ENST00000580391 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
CDK5RAP3-218ENST00000580391 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
CDK5RAP3-218ENST00000580391 TMEM258P61165 79 aa8.4□□□□□ -1.06
CDK5RAP3-218ENST00000580391 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
CDK5RAP3-218ENST00000580391 SNURFQ9Y675 71 aa8.37□□□□□ -1.07
CDK5RAP3-218ENST00000580391 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
CDK5RAP3-218ENST00000580391 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
CDK5RAP3-218ENST00000580391 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
CDK5RAP3-218ENST00000580391 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-218ENST00000580391 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
CDK5RAP3-218ENST00000580391 SEC61GP60059 68 aa8.33□□□□□ -1.08
CDK5RAP3-218ENST00000580391 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
CDK5RAP3-218ENST00000580391 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
CDK5RAP3-218ENST00000580391 LINC00313P59037 77 aa8.32□□□□□ -1.08
CDK5RAP3-218ENST00000580391 NDUFS5O43920 106 aa8.31□□□□□ -1.08
CDK5RAP3-218ENST00000580391 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
CDK5RAP3-218ENST00000580391 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
CDK5RAP3-218ENST00000580391 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
CDK5RAP3-218ENST00000580391 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
CDK5RAP3-218ENST00000580391 H0Y9P7 68 aa8.27□□□□□ -1.09
CDK5RAP3-218ENST00000580391 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
CDK5RAP3-218ENST00000580391 V9GYY9 64 aa8.26□□□□□ -1.09
CDK5RAP3-218ENST00000580391 H7BZZ5 65 aa8.26□□□□□ -1.09
CDK5RAP3-218ENST00000580391 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
CDK5RAP3-218ENST00000580391 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CDK5RAP3-218ENST00000580391 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-218ENST00000580391 MP68P56378 58 aa8.24□□□□□ -1.09
CDK5RAP3-218ENST00000580391 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-218ENST00000580391 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
CDK5RAP3-218ENST00000580391 HERC2O95714 4834 aa8.23□□□□□ -1.09
CDK5RAP3-218ENST00000580391 OXTP01178 125 aa8.23□□□□□ -1.09
CDK5RAP3-218ENST00000580391 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-218ENST00000580391 LINC00208Q96KT6 92 aa8.22□□□□□ -1.09
CDK5RAP3-218ENST00000580391 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CDK5RAP3-218ENST00000580391 Q5W150 140 aa8.19□□□□□ -1.1
CDK5RAP3-218ENST00000580391 NDUFC1O43677 76 aa8.19□□□□□ -1.1
CDK5RAP3-218ENST00000580391 H3BPC8 53 aa8.17□□□□□ -1.1
CDK5RAP3-218ENST00000580391 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
CDK5RAP3-218ENST00000580391 C1orf64Q8NEQ6 169 aa8.17□□□□□ -1.1
CDK5RAP3-218ENST00000580391 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
CDK5RAP3-218ENST00000580391 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
CDK5RAP3-218ENST00000580391 SERP1Q9Y6X1 66 aa8.15□□□□□ -1.1
CDK5RAP3-218ENST00000580391 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-218ENST00000580391 C20orf166-AS1Q96NR2 134 aa8.08□□□□□ -1.12
CDK5RAP3-218ENST00000580391 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
CDK5RAP3-218ENST00000580391 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
CDK5RAP3-218ENST00000580391 A8MUU9 505 aa8.06□□□□□ -1.12
CDK5RAP3-218ENST00000580391 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
CDK5RAP3-218ENST00000580391 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
CDK5RAP3-218ENST00000580391 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
CDK5RAP3-218ENST00000580391 PRR4Q16378 134 aa8.03□□□□□ -1.12
CDK5RAP3-218ENST00000580391 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
CDK5RAP3-218ENST00000580391 CYP4F30PQ9H0H9 118 aa8.02□□□□□ -1.13
CDK5RAP3-218ENST00000580391 PCLOQ9Y6V0 5065 aa7.99□□□□□ -1.13
CDK5RAP3-218ENST00000580391 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
CDK5RAP3-218ENST00000580391 BRK1Q8WUW1 75 aa7.99□□□□□ -1.13
CDK5RAP3-218ENST00000580391 Q75L30 129 aa7.98□□□□□ -1.13
CDK5RAP3-218ENST00000580391 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
CDK5RAP3-218ENST00000580391 J3QL48 77 aa7.95□□□□□ -1.14
CDK5RAP3-218ENST00000580391 XP32Q5T750 250 aa7.95□□□□□ -1.14
CDK5RAP3-218ENST00000580391 LPAP08519 4548 aa7.92□□□□□ -1.14
CDK5RAP3-218ENST00000580391 PMAIP1Q13794 54 aa7.92□□□□□ -1.14
CDK5RAP3-218ENST00000580391 HRES1P13985 223 aa7.91□□□□□ -1.14
CDK5RAP3-218ENST00000580391 C7orf65Q6ZTY9 151 aa7.91□□□□□ -1.14
CDK5RAP3-218ENST00000580391 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-218ENST00000580391 LRP2P98164 4655 aa7.89□□□□□ -1.15
CDK5RAP3-218ENST00000580391 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
CDK5RAP3-218ENST00000580391 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
CDK5RAP3-218ENST00000580391 SPINK7P58062 85 aa7.82□□□□□ -1.16
CDK5RAP3-218ENST00000580391 COA5Q86WW8 74 aa7.79□□□□□ -1.16
CDK5RAP3-218ENST00000580391 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
CDK5RAP3-218ENST00000580391 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
CDK5RAP3-218ENST00000580391 HERC1Q15751 4861 aa7.76□□□□□ -1.17
CDK5RAP3-218ENST00000580391 ACYP2P14621 99 aa7.72□□□□□ -1.17
CDK5RAP3-218ENST00000580391 Q1T7F1 81 aa7.69□□□□□ -1.18
CDK5RAP3-218ENST00000580391 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
CDK5RAP3-218ENST00000580391 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
CDK5RAP3-218ENST00000580391 A8MUN3 132 aa7.64□□□□□ -1.19
CDK5RAP3-218ENST00000580391 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
CDK5RAP3-218ENST00000580391 CHKB-CPT1BH3BT56 60 aa7.62□□□□□ -1.19
CDK5RAP3-218ENST00000580391 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms