RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 MMP24-AS1A0A0U1RRL7 71 aa10.47□□□□□ -0.73
NEIL1-221ENST00000569035 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
NEIL1-221ENST00000569035 RYR1P21817 5038 aa10.47□□□□□ -0.73
NEIL1-221ENST00000569035 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.73
NEIL1-221ENST00000569035 A0A1B0GVX0 72 aa10.46□□□□□ -0.74
NEIL1-221ENST00000569035 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.74
NEIL1-221ENST00000569035 HRCT1Q6UXD1 115 aa10.45□□□□□ -0.74
NEIL1-221ENST00000569035 Q5XG85 94 aa10.44□□□□□ -0.74
NEIL1-221ENST00000569035 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
NEIL1-221ENST00000569035 C8orf17Q9NRJ1 99 aa10.43□□□□□ -0.74
NEIL1-221ENST00000569035 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
NEIL1-221ENST00000569035 H0Y9P7 68 aa10.37□□□□□ -0.75
NEIL1-221ENST00000569035 LIMD2Q9BT23 127 aa10.37□□□□□ -0.75
NEIL1-221ENST00000569035 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
NEIL1-221ENST00000569035 IGHV6-1A0A0B4J1U7 121 aa10.35□□□□□ -0.75
NEIL1-221ENST00000569035 MRPL34Q9BQ48 92 aaKnown RBP10.35□□□□□ -0.75
NEIL1-221ENST00000569035 SPINK6Q6UWN8 80 aa10.34□□□□□ -0.75
NEIL1-221ENST00000569035 LINC00208Q96KT6 92 aa10.33□□□□□ -0.76
NEIL1-221ENST00000569035 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
NEIL1-221ENST00000569035 SPANXA2-OT1Q8N9U9 137 aa10.31□□□□□ -0.76
NEIL1-221ENST00000569035 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
NEIL1-221ENST00000569035 KRTAP17-1Q9BYP8 105 aa10.29□□□□□ -0.76
NEIL1-221ENST00000569035 A0A087X002 238 aa10.29□□□□□ -0.76
NEIL1-221ENST00000569035 KRTAP10-4P60372 401 aaPredicted RBP10.29□□□□□ -0.76
NEIL1-221ENST00000569035 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
NEIL1-221ENST00000569035 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
NEIL1-221ENST00000569035 C1orf64Q8NEQ6 169 aa10.29□□□□□ -0.76
NEIL1-221ENST00000569035 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
NEIL1-221ENST00000569035 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
NEIL1-221ENST00000569035 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
NEIL1-221ENST00000569035 OXTP01178 125 aa10.26□□□□□ -0.77
NEIL1-221ENST00000569035 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
NEIL1-221ENST00000569035 SPINK1P00995 79 aa10.25□□□□□ -0.77
NEIL1-221ENST00000569035 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
NEIL1-221ENST00000569035 RPS29P62273 56 aaKnown RBP10.25□□□□□ -0.77
NEIL1-221ENST00000569035 NDUFS5O43920 106 aa10.24□□□□□ -0.77
NEIL1-221ENST00000569035 Q5VSD8 79 aa10.24□□□□□ -0.77
NEIL1-221ENST00000569035 SPAG11AQ6PDA7 123 aa10.23□□□□□ -0.77
NEIL1-221ENST00000569035 TYMSOSQ8TAI1 123 aa10.23□□□□□ -0.77
NEIL1-221ENST00000569035 KRTAP4-5Q9BYR2 181 aa10.22□□□□□ -0.77
NEIL1-221ENST00000569035 LINC00313P59037 77 aa10.2□□□□□ -0.78
NEIL1-221ENST00000569035 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
NEIL1-221ENST00000569035 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
NEIL1-221ENST00000569035 Q8N1X5 172 aa10.18□□□□□ -0.78
NEIL1-221ENST00000569035 LOC101927531A0A1B0GV80 90 aa10.17□□□□□ -0.78
NEIL1-221ENST00000569035 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
NEIL1-221ENST00000569035 NOTCH2NLQ7Z3S9 236 aa10.12□□□□□ -0.79
NEIL1-221ENST00000569035 Q8N9P0 234 aaPredicted RBP10.11□□□□□ -0.79
NEIL1-221ENST00000569035 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
NEIL1-221ENST00000569035 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
NEIL1-221ENST00000569035 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
NEIL1-221ENST00000569035 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
NEIL1-221ENST00000569035 V9GYY9 64 aa10.06□□□□□ -0.8
NEIL1-221ENST00000569035 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
NEIL1-221ENST00000569035 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
NEIL1-221ENST00000569035 KRTAP13-3Q3SY46 172 aa10.03□□□□□ -0.8
NEIL1-221ENST00000569035 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
NEIL1-221ENST00000569035 TNXBP22105 4242 aa10□□□□□ -0.81
NEIL1-221ENST00000569035 PRR4Q16378 134 aa10□□□□□ -0.81
NEIL1-221ENST00000569035 Q1T7F1 81 aa10□□□□□ -0.81
NEIL1-221ENST00000569035 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
NEIL1-221ENST00000569035 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
NEIL1-221ENST00000569035 KRTAP16-1A8MUX0 517 aa9.98□□□□□ -0.81
NEIL1-221ENST00000569035 Q5W150 140 aa9.97□□□□□ -0.81
NEIL1-221ENST00000569035 MPLKIPQ8TAP9 179 aa9.91□□□□□ -0.82
NEIL1-221ENST00000569035 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
NEIL1-221ENST00000569035 COA5Q86WW8 74 aa9.91□□□□□ -0.82
NEIL1-221ENST00000569035 KRTAP10-8P60410 259 aa9.88□□□□□ -0.83
NEIL1-221ENST00000569035 ACYP2P14621 99 aa9.86□□□□□ -0.83
NEIL1-221ENST00000569035 HERC1Q15751 4861 aa9.81□□□□□ -0.84
NEIL1-221ENST00000569035 MT1HL1P0DM35 61 aa9.8□□□□□ -0.84
NEIL1-221ENST00000569035 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
NEIL1-221ENST00000569035 HRES1P13985 223 aa9.8□□□□□ -0.84
NEIL1-221ENST00000569035 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
NEIL1-221ENST00000569035 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.84
NEIL1-221ENST00000569035 C7orf65Q6ZTY9 151 aa9.76□□□□□ -0.85
NEIL1-221ENST00000569035 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
NEIL1-221ENST00000569035 A8MUU9 505 aa9.74□□□□□ -0.85
NEIL1-221ENST00000569035 RETNLBQ9BQ08 111 aa9.73□□□□□ -0.85
NEIL1-221ENST00000569035 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.85
NEIL1-221ENST00000569035 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
NEIL1-221ENST00000569035 J3QL48 77 aa9.7□□□□□ -0.86
NEIL1-221ENST00000569035 A8MUN3 132 aa9.69□□□□□ -0.86
NEIL1-221ENST00000569035 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
NEIL1-221ENST00000569035 PSPHP1O15172 72 aa9.66□□□□□ -0.86
NEIL1-221ENST00000569035 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
NEIL1-221ENST00000569035 Q75L30 129 aa9.63□□□□□ -0.87
NEIL1-221ENST00000569035 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
NEIL1-221ENST00000569035 C9orf92A6NGG3 77 aa9.61□□□□□ -0.87
NEIL1-221ENST00000569035 Q5VV11 94 aa9.61□□□□□ -0.87
NEIL1-221ENST00000569035 SPTSSBQ8NFR3 76 aa9.53□□□□□ -0.88
NEIL1-221ENST00000569035 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
NEIL1-221ENST00000569035 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
NEIL1-221ENST00000569035 A6NED7 52 aa9.46□□□□□ -0.9
NEIL1-221ENST00000569035 SPINK7P58062 85 aa9.46□□□□□ -0.9
NEIL1-221ENST00000569035 A0A1B0GU69 56 aa9.42□□□□□ -0.9
NEIL1-221ENST00000569035 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
NEIL1-221ENST00000569035 LPAP08519 4548 aa9.4□□□□□ -0.91
NEIL1-221ENST00000569035 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.91
NEIL1-221ENST00000569035 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms