RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 A0A087WSZ3 146 aa6.77□□□□□ -1.33
VPS9D1-207ENST00000568691 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
VPS9D1-207ENST00000568691 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
VPS9D1-207ENST00000568691 MT1HP80294 61 aa6.76□□□□□ -1.33
VPS9D1-207ENST00000568691 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
VPS9D1-207ENST00000568691 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
VPS9D1-207ENST00000568691 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
VPS9D1-207ENST00000568691 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
VPS9D1-207ENST00000568691 BPY2O14599 106 aa6.74□□□□□ -1.33
VPS9D1-207ENST00000568691 IGKV3D-7A0A0C4DH55 119 aa6.73□□□□□ -1.33
VPS9D1-207ENST00000568691 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
VPS9D1-207ENST00000568691 J3KT08 172 aa6.72□□□□□ -1.33
VPS9D1-207ENST00000568691 Q5XG85 94 aa6.72□□□□□ -1.33
VPS9D1-207ENST00000568691 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
VPS9D1-207ENST00000568691 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
VPS9D1-207ENST00000568691 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
VPS9D1-207ENST00000568691 HIST1H4AP62805 103 aaKnown RBP6.69□□□□□ -1.34
VPS9D1-207ENST00000568691 LIMD2Q9BT23 127 aa6.69□□□□□ -1.34
VPS9D1-207ENST00000568691 KRTAP13-3Q3SY46 172 aa6.68□□□□□ -1.34
VPS9D1-207ENST00000568691 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
VPS9D1-207ENST00000568691 USH2AO75445 5202 aa6.68□□□□□ -1.34
VPS9D1-207ENST00000568691 SPINK1P00995 79 aa6.67□□□□□ -1.34
VPS9D1-207ENST00000568691 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
VPS9D1-207ENST00000568691 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
VPS9D1-207ENST00000568691 FAM236AA0A1B0GUQ0 79 aa6.66□□□□□ -1.34
VPS9D1-207ENST00000568691 FAM236BA0A1B0GV22 79 aa6.66□□□□□ -1.34
VPS9D1-207ENST00000568691 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
VPS9D1-207ENST00000568691 Q96NJ1 140 aa6.66□□□□□ -1.34
VPS9D1-207ENST00000568691 A8MWP4 228 aa6.65□□□□□ -1.34
VPS9D1-207ENST00000568691 DSCR10P59022 87 aa6.65□□□□□ -1.34
VPS9D1-207ENST00000568691 C4orf48Q5BLP8 95 aa6.65□□□□□ -1.34
VPS9D1-207ENST00000568691 ATOX1O00244 68 aa6.64□□□□□ -1.35
VPS9D1-207ENST00000568691 A0A087WVE0 104 aa6.63□□□□□ -1.35
VPS9D1-207ENST00000568691 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
VPS9D1-207ENST00000568691 K7EQZ3 153 aa6.62□□□□□ -1.35
VPS9D1-207ENST00000568691 NDUFB1O75438 58 aa6.62□□□□□ -1.35
VPS9D1-207ENST00000568691 PRR15Q8IV56 129 aa6.61□□□□□ -1.35
VPS9D1-207ENST00000568691 Q8N9L7 120 aa6.6□□□□□ -1.35
VPS9D1-207ENST00000568691 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
VPS9D1-207ENST00000568691 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
VPS9D1-207ENST00000568691 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
VPS9D1-207ENST00000568691 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
VPS9D1-207ENST00000568691 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
VPS9D1-207ENST00000568691 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
VPS9D1-207ENST00000568691 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
VPS9D1-207ENST00000568691 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
VPS9D1-207ENST00000568691 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
VPS9D1-207ENST00000568691 PCP4P48539 62 aa6.55□□□□□ -1.36
VPS9D1-207ENST00000568691 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
VPS9D1-207ENST00000568691 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
VPS9D1-207ENST00000568691 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
VPS9D1-207ENST00000568691 TRAV7A0A075B6U4 112 aa6.51□□□□□ -1.37
VPS9D1-207ENST00000568691 XP32Q5T750 250 aa6.51□□□□□ -1.37
VPS9D1-207ENST00000568691 CASC2Q6XLA1 102 aa6.51□□□□□ -1.37
VPS9D1-207ENST00000568691 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
VPS9D1-207ENST00000568691 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
VPS9D1-207ENST00000568691 IGHV6-1A0A0B4J1U7 121 aa6.49□□□□□ -1.37
VPS9D1-207ENST00000568691 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
VPS9D1-207ENST00000568691 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
VPS9D1-207ENST00000568691 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
VPS9D1-207ENST00000568691 UQCRQO14949 82 aa6.48□□□□□ -1.37
VPS9D1-207ENST00000568691 COX7CP15954 63 aa6.48□□□□□ -1.37
VPS9D1-207ENST00000568691 WFDC13Q8IUB5 93 aa6.47□□□□□ -1.37
VPS9D1-207ENST00000568691 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
VPS9D1-207ENST00000568691 LINC00313P59037 77 aa6.44□□□□□ -1.38
VPS9D1-207ENST00000568691 MRPL34Q9BQ48 92 aaKnown RBP6.44□□□□□ -1.38
VPS9D1-207ENST00000568691 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
VPS9D1-207ENST00000568691 M0R2T5 61 aa6.41□□□□□ -1.38
VPS9D1-207ENST00000568691 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
VPS9D1-207ENST00000568691 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.38
VPS9D1-207ENST00000568691 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
VPS9D1-207ENST00000568691 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
VPS9D1-207ENST00000568691 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
VPS9D1-207ENST00000568691 Q8N9P0 234 aaPredicted RBP6.39□□□□□ -1.39
VPS9D1-207ENST00000568691 H3BPC8 53 aa6.38□□□□□ -1.39
VPS9D1-207ENST00000568691 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
VPS9D1-207ENST00000568691 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
VPS9D1-207ENST00000568691 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
VPS9D1-207ENST00000568691 MP68P56378 58 aa6.35□□□□□ -1.39
VPS9D1-207ENST00000568691 NDUFS5O43920 106 aa6.34□□□□□ -1.39
VPS9D1-207ENST00000568691 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
VPS9D1-207ENST00000568691 NDUFC1O43677 76 aa6.33□□□□□ -1.4
VPS9D1-207ENST00000568691 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
VPS9D1-207ENST00000568691 H0Y9P7 68 aa6.32□□□□□ -1.4
VPS9D1-207ENST00000568691 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
VPS9D1-207ENST00000568691 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
VPS9D1-207ENST00000568691 A8MUU9 505 aa6.29□□□□□ -1.4
VPS9D1-207ENST00000568691 LCE2BO14633 110 aa6.29□□□□□ -1.4
VPS9D1-207ENST00000568691 Q75L30 129 aa6.27□□□□□ -1.41
VPS9D1-207ENST00000568691 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
VPS9D1-207ENST00000568691 C9orf92A6NGG3 77 aa6.26□□□□□ -1.41
VPS9D1-207ENST00000568691 TMEM258P61165 79 aa6.26□□□□□ -1.41
VPS9D1-207ENST00000568691 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
VPS9D1-207ENST00000568691 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
VPS9D1-207ENST00000568691 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
VPS9D1-207ENST00000568691 H7BZZ5 65 aa6.24□□□□□ -1.41
VPS9D1-207ENST00000568691 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
VPS9D1-207ENST00000568691 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
VPS9D1-207ENST00000568691 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
VPS9D1-207ENST00000568691 Q5W150 140 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms