RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
HERC2-208ENST00000566635 NDUFC1O43677 76 aa10.22□□□□□ -0.77
HERC2-208ENST00000566635 Q8N9L7 120 aa10.22□□□□□ -0.77
HERC2-208ENST00000566635 Q96NJ1 140 aa10.22□□□□□ -0.77
HERC2-208ENST00000566635 SMIM26A0A096LP01 95 aa10.21□□□□□ -0.77
HERC2-208ENST00000566635 LINC00304Q8N9R0 145 aa10.21□□□□□ -0.78
HERC2-208ENST00000566635 MYCBP2O75592 4640 aa10.2□□□□□ -0.78
HERC2-208ENST00000566635 TNXBP22105 4242 aa10.2□□□□□ -0.78
HERC2-208ENST00000566635 ATP5EP56381 51 aaPredicted RBP10.19□□□□□ -0.78
HERC2-208ENST00000566635 DSCR10P59022 87 aa10.19□□□□□ -0.78
HERC2-208ENST00000566635 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
HERC2-208ENST00000566635 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
HERC2-208ENST00000566635 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
HERC2-208ENST00000566635 FP248Q71RG6 208 aaPredicted RBP10.16□□□□□ -0.78
HERC2-208ENST00000566635 IGKV4-1P06312 121 aa10.15□□□□□ -0.78
HERC2-208ENST00000566635 K7EQZ3 153 aa10.15□□□□□ -0.79
HERC2-208ENST00000566635 HERC2O95714 4834 aa10.14□□□□□ -0.79
HERC2-208ENST00000566635 SPINK1P00995 79 aa10.14□□□□□ -0.79
HERC2-208ENST00000566635 LIMD2Q9BT23 127 aa10.13□□□□□ -0.79
HERC2-208ENST00000566635 SNURFQ9Y675 71 aa10.13□□□□□ -0.79
HERC2-208ENST00000566635 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
HERC2-208ENST00000566635 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
HERC2-208ENST00000566635 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
HERC2-208ENST00000566635 A8MWP4 228 aa10.09□□□□□ -0.79
HERC2-208ENST00000566635 C1orf195Q5TG92 126 aa10.09□□□□□ -0.79
HERC2-208ENST00000566635 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
HERC2-208ENST00000566635 ABCA13Q86UQ4 5058 aa10.07□□□□□ -0.8
HERC2-208ENST00000566635 PRR15Q8IV56 129 aa10.05□□□□□ -0.8
HERC2-208ENST00000566635 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
HERC2-208ENST00000566635 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
HERC2-208ENST00000566635 NDUFB1O75438 58 aa10.01□□□□□ -0.81
HERC2-208ENST00000566635 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
HERC2-208ENST00000566635 A0A1B0GVX0 72 aa10□□□□□ -0.81
HERC2-208ENST00000566635 A0A0U1RQV1 116 aa10□□□□□ -0.81
HERC2-208ENST00000566635 OCR1Q9BZK8 76 aa10□□□□□ -0.81
HERC2-208ENST00000566635 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
HERC2-208ENST00000566635 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
HERC2-208ENST00000566635 RETNLBQ9BQ08 111 aa9.97□□□□□ -0.81
HERC2-208ENST00000566635 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.82
HERC2-208ENST00000566635 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
HERC2-208ENST00000566635 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
HERC2-208ENST00000566635 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
HERC2-208ENST00000566635 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
HERC2-208ENST00000566635 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
HERC2-208ENST00000566635 BRK1Q8WUW1 75 aa9.9□□□□□ -0.82
HERC2-208ENST00000566635 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
HERC2-208ENST00000566635 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
HERC2-208ENST00000566635 LINC00313P59037 77 aa9.84□□□□□ -0.83
HERC2-208ENST00000566635 MPLKIPQ8TAP9 179 aa9.83□□□□□ -0.84
HERC2-208ENST00000566635 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
HERC2-208ENST00000566635 Q1T7F1 81 aa9.8□□□□□ -0.84
HERC2-208ENST00000566635 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
HERC2-208ENST00000566635 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
HERC2-208ENST00000566635 V9GYY9 64 aa9.79□□□□□ -0.84
HERC2-208ENST00000566635 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
HERC2-208ENST00000566635 J3QL48 77 aa9.77□□□□□ -0.84
HERC2-208ENST00000566635 NDUFS5O43920 106 aa9.75□□□□□ -0.85
HERC2-208ENST00000566635 CYP4F30PQ9H0H9 118 aa9.73□□□□□ -0.85
HERC2-208ENST00000566635 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
HERC2-208ENST00000566635 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
HERC2-208ENST00000566635 IGLV7-46A0A075B6I9 117 aa9.71□□□□□ -0.86
HERC2-208ENST00000566635 SEC61GP60059 68 aa9.7□□□□□ -0.86
HERC2-208ENST00000566635 PRR4Q16378 134 aa9.7□□□□□ -0.86
HERC2-208ENST00000566635 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
HERC2-208ENST00000566635 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.86
HERC2-208ENST00000566635 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
HERC2-208ENST00000566635 TRAV22A0A0B4J277 110 aa9.62□□□□□ -0.87
HERC2-208ENST00000566635 PMAIP1Q13794 54 aa9.62□□□□□ -0.87
HERC2-208ENST00000566635 H0Y9P7 68 aa9.61□□□□□ -0.87
HERC2-208ENST00000566635 Q5W150 140 aa9.61□□□□□ -0.87
HERC2-208ENST00000566635 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
HERC2-208ENST00000566635 A8MUU9 505 aa9.59□□□□□ -0.87
HERC2-208ENST00000566635 LPAP08519 4548 aa9.58□□□□□ -0.88
HERC2-208ENST00000566635 MP68P56378 58 aa9.56□□□□□ -0.88
HERC2-208ENST00000566635 XP32Q5T750 250 aa9.55□□□□□ -0.88
HERC2-208ENST00000566635 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
HERC2-208ENST00000566635 PSPHP1O15172 72 aa9.54□□□□□ -0.88
HERC2-208ENST00000566635 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
HERC2-208ENST00000566635 SPANXA2-OT1Q8N9U9 137 aa9.53□□□□□ -0.88
HERC2-208ENST00000566635 HERC1Q15751 4861 aa9.53□□□□□ -0.88
HERC2-208ENST00000566635 Q75L30 129 aa9.52□□□□□ -0.89
HERC2-208ENST00000566635 H3BPC8 53 aa9.51□□□□□ -0.89
HERC2-208ENST00000566635 A8MUN3 132 aa9.49□□□□□ -0.89
HERC2-208ENST00000566635 Q5VV11 94 aa9.49□□□□□ -0.89
HERC2-208ENST00000566635 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
HERC2-208ENST00000566635 LRP2P98164 4655 aa9.47□□□□□ -0.89
HERC2-208ENST00000566635 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
HERC2-208ENST00000566635 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
HERC2-208ENST00000566635 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.91
HERC2-208ENST00000566635 PCOTHQ58A44 107 aa9.39□□□□□ -0.91
HERC2-208ENST00000566635 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
HERC2-208ENST00000566635 HMCN2Q8NDA2 5059 aa9.38□□□□□ -0.91
HERC2-208ENST00000566635 A8MU10 97 aa9.35□□□□□ -0.91
HERC2-208ENST00000566635 CHKB-CPT1BH3BT56 60 aa9.35□□□□□ -0.91
HERC2-208ENST00000566635 KTN1-AS1Q86SY8 53 aa9.32□□□□□ -0.92
HERC2-208ENST00000566635 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
HERC2-208ENST00000566635 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
HERC2-208ENST00000566635 LCA10Q71F78 164 aa9.29□□□□□ -0.92
HERC2-208ENST00000566635 SPINK7P58062 85 aa9.28□□□□□ -0.92
HERC2-208ENST00000566635 COA5Q86WW8 74 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms