RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 C1orf195Q5TG92 126 aa11.21□□□□□ -0.61
CLN6-205ENST00000564846 CASC2Q6XLA1 102 aa11.21□□□□□ -0.61
CLN6-205ENST00000564846 MMP24-AS1A0A0U1RRL7 71 aa11.21□□□□□ -0.62
CLN6-205ENST00000564846 OCR1Q9BZK8 76 aa11.21□□□□□ -0.62
CLN6-205ENST00000564846 IGHV6-1A0A0B4J1U7 121 aa11.2□□□□□ -0.62
CLN6-205ENST00000564846 Q8N1X5 172 aa11.19□□□□□ -0.62
CLN6-205ENST00000564846 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
CLN6-205ENST00000564846 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
CLN6-205ENST00000564846 hDV103S1A0JD37 113 aa11.16□□□□□ -0.62
CLN6-205ENST00000564846 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
CLN6-205ENST00000564846 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
CLN6-205ENST00000564846 KRTAP10-8P60410 259 aa11.08□□□□□ -0.64
CLN6-205ENST00000564846 NOTCH2NLQ7Z3S9 236 aa11.08□□□□□ -0.64
CLN6-205ENST00000564846 TMEM254Q8TBM7 123 aa11.08□□□□□ -0.64
CLN6-205ENST00000564846 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
CLN6-205ENST00000564846 MRPL34Q9BQ48 92 aaKnown RBP11.06□□□□□ -0.64
CLN6-205ENST00000564846 LINC00313P59037 77 aa11.05□□□□□ -0.64
CLN6-205ENST00000564846 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
CLN6-205ENST00000564846 KLKP1Q107X0 134 aa11.01□□□□□ -0.65
CLN6-205ENST00000564846 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
CLN6-205ENST00000564846 TNXBP22105 4242 aa10.99□□□□□ -0.65
CLN6-205ENST00000564846 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
CLN6-205ENST00000564846 NDUFS5O43920 106 aa10.97□□□□□ -0.65
CLN6-205ENST00000564846 CYSTM1Q9H1C7 97 aa10.97□□□□□ -0.65
CLN6-205ENST00000564846 SNURFQ9Y675 71 aa10.97□□□□□ -0.65
CLN6-205ENST00000564846 FAT3Q8TDW7 4589 aa10.97□□□□□ -0.65
CLN6-205ENST00000564846 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
CLN6-205ENST00000564846 MP68P56378 58 aa10.95□□□□□ -0.66
CLN6-205ENST00000564846 SVIPQ8NHG7 77 aa10.95□□□□□ -0.66
CLN6-205ENST00000564846 KRTAP16-1A8MUX0 517 aa10.91□□□□□ -0.66
CLN6-205ENST00000564846 TRAV22A0A0B4J277 110 aa10.9□□□□□ -0.66
CLN6-205ENST00000564846 H0Y9P7 68 aa10.9□□□□□ -0.66
CLN6-205ENST00000564846 NDUFC1O43677 76 aa10.9□□□□□ -0.66
CLN6-205ENST00000564846 Q8N9P0 234 aaPredicted RBP10.9□□□□□ -0.66
CLN6-205ENST00000564846 FLG2Q5D862 2391 aaPredicted RBP10.9□□□□□ -0.66
CLN6-205ENST00000564846 H3BPC8 53 aa10.89□□□□□ -0.67
CLN6-205ENST00000564846 MT1HL1P0DM35 61 aa10.89□□□□□ -0.67
CLN6-205ENST00000564846 OXTP01178 125 aa10.88□□□□□ -0.67
CLN6-205ENST00000564846 RETNLBQ9BQ08 111 aa10.88□□□□□ -0.67
CLN6-205ENST00000564846 H7BZZ5 65 aa10.87□□□□□ -0.67
CLN6-205ENST00000564846 ZCCHC13Q8WW36 166 aaKnown RBP10.87□□□□□ -0.67
CLN6-205ENST00000564846 TMEM258P61165 79 aa10.85□□□□□ -0.67
CLN6-205ENST00000564846 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
CLN6-205ENST00000564846 KRTAP4-5Q9BYR2 181 aa10.85□□□□□ -0.67
CLN6-205ENST00000564846 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
CLN6-205ENST00000564846 C1orf64Q8NEQ6 169 aa10.8□□□□□ -0.68
CLN6-205ENST00000564846 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
CLN6-205ENST00000564846 FP248Q71RG6 208 aaPredicted RBP10.8□□□□□ -0.68
CLN6-205ENST00000564846 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
CLN6-205ENST00000564846 Q5W150 140 aa10.77□□□□□ -0.69
CLN6-205ENST00000564846 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
CLN6-205ENST00000564846 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
CLN6-205ENST00000564846 FAM236DA0A1B0GTK5 79 aa10.72□□□□□ -0.69
CLN6-205ENST00000564846 FAM236CP0DP71 79 aa10.72□□□□□ -0.69
CLN6-205ENST00000564846 LOC101927531A0A1B0GV80 90 aa10.7□□□□□ -0.7
CLN6-205ENST00000564846 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
CLN6-205ENST00000564846 HERC2O95714 4834 aa10.69□□□□□ -0.7
CLN6-205ENST00000564846 A8MUU9 505 aa10.68□□□□□ -0.7
CLN6-205ENST00000564846 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
CLN6-205ENST00000564846 IGLV7-46A0A075B6I9 117 aa10.67□□□□□ -0.7
CLN6-205ENST00000564846 ABCA13Q86UQ4 5058 aa10.64□□□□□ -0.71
CLN6-205ENST00000564846 CYP4F30PQ9H0H9 118 aa10.61□□□□□ -0.71
CLN6-205ENST00000564846 Q75L30 129 aa10.6□□□□□ -0.71
CLN6-205ENST00000564846 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
CLN6-205ENST00000564846 IGKV2-30P06310 120 aa10.6□□□□□ -0.71
CLN6-205ENST00000564846 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
CLN6-205ENST00000564846 PRR4Q16378 134 aa10.58□□□□□ -0.72
CLN6-205ENST00000564846 J3QL48 77 aa10.57□□□□□ -0.72
CLN6-205ENST00000564846 RPS28P62857 69 aaKnown RBP10.54□□□□□ -0.72
CLN6-205ENST00000564846 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
CLN6-205ENST00000564846 XP32Q5T750 250 aa10.5□□□□□ -0.73
CLN6-205ENST00000564846 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
CLN6-205ENST00000564846 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
CLN6-205ENST00000564846 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
CLN6-205ENST00000564846 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
CLN6-205ENST00000564846 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
CLN6-205ENST00000564846 HRES1P13985 223 aa10.44□□□□□ -0.74
CLN6-205ENST00000564846 SPINK7P58062 85 aa10.36□□□□□ -0.75
CLN6-205ENST00000564846 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
CLN6-205ENST00000564846 ACYP2P14621 99 aa10.27□□□□□ -0.77
CLN6-205ENST00000564846 COA5Q86WW8 74 aa10.26□□□□□ -0.77
CLN6-205ENST00000564846 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
CLN6-205ENST00000564846 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
CLN6-205ENST00000564846 C4orf26Q17RF5 130 aa10.23□□□□□ -0.77
CLN6-205ENST00000564846 LPAP08519 4548 aa10.2□□□□□ -0.78
CLN6-205ENST00000564846 A8MUN3 132 aa10.2□□□□□ -0.78
CLN6-205ENST00000564846 LRP2P98164 4655 aa10.17□□□□□ -0.78
CLN6-205ENST00000564846 SEC61BP60468 96 aaKnown RBP10.12□□□□□ -0.79
CLN6-205ENST00000564846 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
CLN6-205ENST00000564846 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
CLN6-205ENST00000564846 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
CLN6-205ENST00000564846 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
CLN6-205ENST00000564846 Q1T7F1 81 aa10.03□□□□□ -0.8
CLN6-205ENST00000564846 V9GYY9 64 aa10.01□□□□□ -0.81
CLN6-205ENST00000564846 HERC1Q15751 4861 aa10.01□□□□□ -0.81
CLN6-205ENST00000564846 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.82
CLN6-205ENST00000564846 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
CLN6-205ENST00000564846 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
CLN6-205ENST00000564846 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.82
CLN6-205ENST00000564846 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms