RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 KRTAP1-4P0C5Y4 121 aa12.43□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 C1orf64Q8NEQ6 169 aa12.43□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 SMIM26A0A096LP01 95 aa12.41□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 C8orf87E5RJ46 101 aa12.4□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 NDUFS5O43920 106 aa12.4□□□□□ -0.42
VPS9D1-AS1-202ENST00000562866 LRP1BQ9NZR2 4599 aa12.38□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 LIMD2Q9BT23 127 aa12.38□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 PLA2G1BP04054 148 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
VPS9D1-AS1-202ENST00000562866 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
VPS9D1-AS1-202ENST00000562866 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
VPS9D1-AS1-202ENST00000562866 C4orf48Q5BLP8 95 aa12.32□□□□□ -0.44
VPS9D1-AS1-202ENST00000562866 C1orf195Q5TG92 126 aa12.32□□□□□ -0.44
VPS9D1-AS1-202ENST00000562866 TYMSOSQ8TAI1 123 aa12.31□□□□□ -0.44
VPS9D1-AS1-202ENST00000562866 KMT2CQ8NEZ4 4911 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 LINC00313P59037 77 aa12.26□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 SPINK1P00995 79 aa12.25□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 PRR4Q16378 134 aa12.25□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 C4orf26Q17RF5 130 aa12.23□□□□□ -0.45
VPS9D1-AS1-202ENST00000562866 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 VPS13BQ7Z7G8 4022 aa12.19□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 RPS29P62273 56 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 SPAG11AQ6PDA7 123 aa12.18□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 PCOTHQ58A44 107 aa12.15□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 LINC00304Q8N9R0 145 aa12.15□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 RYR2Q92736 4967 aa12.15□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 Q8N9P0 234 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-AS1-202ENST00000562866 KRTAP13-3Q3SY46 172 aa12.14□□□□□ -0.47
VPS9D1-AS1-202ENST00000562866 Q5W150 140 aa12.13□□□□□ -0.47
VPS9D1-AS1-202ENST00000562866 FAM229AH3BQW9 127 aa12.12□□□□□ -0.47
VPS9D1-AS1-202ENST00000562866 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
VPS9D1-AS1-202ENST00000562866 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
VPS9D1-AS1-202ENST00000562866 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
VPS9D1-AS1-202ENST00000562866 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
VPS9D1-AS1-202ENST00000562866 MPLKIPQ8TAP9 179 aa12.08□□□□□ -0.48
VPS9D1-AS1-202ENST00000562866 RYR3Q15413 4870 aa12.05□□□□□ -0.48
VPS9D1-AS1-202ENST00000562866 Q1T7F1 81 aa12.03□□□□□ -0.48
VPS9D1-AS1-202ENST00000562866 COA5Q86WW8 74 aa11.99□□□□□ -0.49
VPS9D1-AS1-202ENST00000562866 SVIPQ8NHG7 77 aa11.99□□□□□ -0.49
VPS9D1-AS1-202ENST00000562866 V9GYY9 64 aa11.99□□□□□ -0.49
VPS9D1-AS1-202ENST00000562866 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-AS1-202ENST00000562866 IGKV2-30P06310 120 aa11.93□□□□□ -0.5
VPS9D1-AS1-202ENST00000562866 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
VPS9D1-AS1-202ENST00000562866 HRES1P13985 223 aa11.86□□□□□ -0.51
VPS9D1-AS1-202ENST00000562866 ACYP2P14621 99 aa11.82□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 FAT1Q14517 4588 aa11.81□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 DMAC1Q96GE9 116 aa11.79□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 IGKV2D-30A0A075B6S6 120 aa11.78□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 PSPHP1O15172 72 aa11.77□□□□□ -0.52
VPS9D1-AS1-202ENST00000562866 Q5VSD8 79 aa11.74□□□□□ -0.53
VPS9D1-AS1-202ENST00000562866 A8MUN3 132 aa11.73□□□□□ -0.53
VPS9D1-AS1-202ENST00000562866 PRO0628Q9UI54 55 aa11.73□□□□□ -0.53
VPS9D1-AS1-202ENST00000562866 C20orf166-AS1Q96NR2 134 aa11.72□□□□□ -0.53
VPS9D1-AS1-202ENST00000562866 A8MUU9 505 aa11.71□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 BRK1Q8WUW1 75 aa11.71□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 PRR15LQ9BU68 103 aa11.69□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 LINC01558Q9Y6Z2 57 aa11.67□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 CHKB-CPT1BH3BT56 60 aa11.67□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 Q5VV11 94 aa11.66□□□□□ -0.54
VPS9D1-AS1-202ENST00000562866 Q8N1X5 172 aa11.64□□□□□ -0.55
VPS9D1-AS1-202ENST00000562866 EPPK1P58107 5090 aaKnown RBP11.62□□□□□ -0.55
VPS9D1-AS1-202ENST00000562866 Q75L30 129 aa11.59□□□□□ -0.55
VPS9D1-AS1-202ENST00000562866 HSPG2P98160 4391 aa11.54□□□□□ -0.56
VPS9D1-AS1-202ENST00000562866 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-AS1-202ENST00000562866 A6NED7 52 aa11.44□□□□□ -0.58
VPS9D1-AS1-202ENST00000562866 TNXBP22105 4242 aa11.43□□□□□ -0.58
VPS9D1-AS1-202ENST00000562866 SPINK7P58062 85 aa11.42□□□□□ -0.58
VPS9D1-AS1-202ENST00000562866 RYR1P21817 5038 aa11.42□□□□□ -0.58
VPS9D1-AS1-202ENST00000562866 KRTAP17-1Q9BYP8 105 aa11.4□□□□□ -0.58
VPS9D1-AS1-202ENST00000562866 FAT3Q8TDW7 4589 aa11.39□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 A0A1B0GU69 56 aa11.34□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
VPS9D1-AS1-202ENST00000562866 SPTSSBQ8NFR3 76 aa11.33□□□□□ -0.6
VPS9D1-AS1-202ENST00000562866 RPL37P61927 97 aaKnown RBP11.31□□□□□ -0.6
VPS9D1-AS1-202ENST00000562866 CDC42SE1Q9NRR8 79 aa11.31□□□□□ -0.6
VPS9D1-AS1-202ENST00000562866 BIRC6Q9NR09 4857 aa11.3□□□□□ -0.6
VPS9D1-AS1-202ENST00000562866 LCA10Q71F78 164 aa11.28□□□□□ -0.6
VPS9D1-AS1-202ENST00000562866 XP32Q5T750 250 aa11.26□□□□□ -0.61
VPS9D1-AS1-202ENST00000562866 KRTAP3-1Q9BYR8 98 aa11.23□□□□□ -0.61
VPS9D1-AS1-202ENST00000562866 A8MU10 97 aa11.23□□□□□ -0.61
VPS9D1-AS1-202ENST00000562866 COX6B2Q6YFQ2 88 aa11.23□□□□□ -0.61
VPS9D1-AS1-202ENST00000562866 SEC61GP60059 68 aa11.16□□□□□ -0.62
VPS9D1-AS1-202ENST00000562866 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
VPS9D1-AS1-202ENST00000562866 UQCR11O14957 56 aa11.1□□□□□ -0.63
VPS9D1-AS1-202ENST00000562866 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
VPS9D1-AS1-202ENST00000562866 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
VPS9D1-AS1-202ENST00000562866 HERC2O95714 4834 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms