RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 Q6ZR54 194 aa5.58□□□□□ -1.52
CLUHP3-206ENST00000562354 HRES1P13985 223 aa5.56□□□□□ -1.52
CLUHP3-206ENST00000562354 PSORS1C2Q9UIG4 136 aa5.56□□□□□ -1.52
CLUHP3-206ENST00000562354 SPINK1P00995 79 aa5.55□□□□□ -1.52
CLUHP3-206ENST00000562354 TGP01266 2768 aa5.54□□□□□ -1.52
CLUHP3-206ENST00000562354 ASB16-AS1Q495Z4 193 aa5.54□□□□□ -1.52
CLUHP3-206ENST00000562354 IGLV7-43P04211 117 aa5.54□□□□□ -1.52
CLUHP3-206ENST00000562354 SPACA4Q8TDM5 124 aa5.53□□□□□ -1.52
CLUHP3-206ENST00000562354 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
CLUHP3-206ENST00000562354 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
CLUHP3-206ENST00000562354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
CLUHP3-206ENST00000562354 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
CLUHP3-206ENST00000562354 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
CLUHP3-206ENST00000562354 SPINK7P58062 85 aa5.48□□□□□ -1.53
CLUHP3-206ENST00000562354 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
CLUHP3-206ENST00000562354 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
CLUHP3-206ENST00000562354 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
CLUHP3-206ENST00000562354 A6NN06 94 aa5.46□□□□□ -1.53
CLUHP3-206ENST00000562354 Q96NJ1 140 aa5.46□□□□□ -1.54
CLUHP3-206ENST00000562354 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
CLUHP3-206ENST00000562354 ANAPC11Q9NYG5 84 aa5.45□□□□□ -1.54
CLUHP3-206ENST00000562354 PANO1I0J062 215 aa5.44□□□□□ -1.54
CLUHP3-206ENST00000562354 A8MU10 97 aa5.44□□□□□ -1.54
CLUHP3-206ENST00000562354 Q5W150 140 aa5.43□□□□□ -1.54
CLUHP3-206ENST00000562354 A0A087X002 238 aa5.42□□□□□ -1.54
CLUHP3-206ENST00000562354 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
CLUHP3-206ENST00000562354 PLA2G1BP04054 148 aaKnown RBP5.39□□□□□ -1.55
CLUHP3-206ENST00000562354 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
CLUHP3-206ENST00000562354 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
CLUHP3-206ENST00000562354 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
CLUHP3-206ENST00000562354 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
CLUHP3-206ENST00000562354 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
CLUHP3-206ENST00000562354 DMBT1Q9UGM3 2413 aaPredicted RBP5.33□□□□□ -1.56
CLUHP3-206ENST00000562354 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
CLUHP3-206ENST00000562354 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
CLUHP3-206ENST00000562354 A0A1B0GU33 70 aa5.31□□□□□ -1.56
CLUHP3-206ENST00000562354 Q8N1X5 172 aa5.31□□□□□ -1.56
CLUHP3-206ENST00000562354 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
CLUHP3-206ENST00000562354 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
CLUHP3-206ENST00000562354 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
CLUHP3-206ENST00000562354 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
CLUHP3-206ENST00000562354 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
CLUHP3-206ENST00000562354 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
CLUHP3-206ENST00000562354 DNAH9Q9NYC9 4486 aa5.22□□□□□ -1.57
CLUHP3-206ENST00000562354 J3QL48 77 aa5.22□□□□□ -1.57
CLUHP3-206ENST00000562354 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
CLUHP3-206ENST00000562354 ANK2Q01484 3957 aa5.21□□□□□ -1.58
CLUHP3-206ENST00000562354 MEGF8Q7Z7M0 2845 aa5.2□□□□□ -1.58
CLUHP3-206ENST00000562354 C9orf92A6NGG3 77 aa5.2□□□□□ -1.58
CLUHP3-206ENST00000562354 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
CLUHP3-206ENST00000562354 Q6ZSA8 131 aa5.19□□□□□ -1.58
CLUHP3-206ENST00000562354 DNAH3Q8TD57 4116 aa5.18□□□□□ -1.58
CLUHP3-206ENST00000562354 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
CLUHP3-206ENST00000562354 COL7A1Q02388 2944 aa5.17□□□□□ -1.58
CLUHP3-206ENST00000562354 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
CLUHP3-206ENST00000562354 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
CLUHP3-206ENST00000562354 FLG2Q5D862 2391 aaPredicted RBP5.14□□□□□ -1.59
CLUHP3-206ENST00000562354 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
CLUHP3-206ENST00000562354 ROMO1P60602 79 aa5.12□□□□□ -1.59
CLUHP3-206ENST00000562354 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
CLUHP3-206ENST00000562354 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
CLUHP3-206ENST00000562354 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
CLUHP3-206ENST00000562354 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
CLUHP3-206ENST00000562354 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
CLUHP3-206ENST00000562354 PLECQ15149 4684 aaKnown RBP5.09□□□□□ -1.6
CLUHP3-206ENST00000562354 A0A0D9SG42 100 aa5.07□□□□□ -1.6
CLUHP3-206ENST00000562354 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
CLUHP3-206ENST00000562354 KRTAP1-4P0C5Y4 121 aa5.04□□□□□ -1.6
CLUHP3-206ENST00000562354 PRKDCP78527 4128 aaKnown RBP5.04□□□□□ -1.6
CLUHP3-206ENST00000562354 Q5VSD8 79 aa5.04□□□□□ -1.6
CLUHP3-206ENST00000562354 S4R3F8 94 aa5.03□□□□□ -1.6
CLUHP3-206ENST00000562354 STARD9Q9P2P6 4700 aa5.02□□□□□ -1.61
CLUHP3-206ENST00000562354 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
CLUHP3-206ENST00000562354 VPS13DQ5THJ4 4388 aa5.01□□□□□ -1.61
CLUHP3-206ENST00000562354 A8MUU9 505 aa5.01□□□□□ -1.61
CLUHP3-206ENST00000562354 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
CLUHP3-206ENST00000562354 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
CLUHP3-206ENST00000562354 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
CLUHP3-206ENST00000562354 DNAH1Q9P2D7 4330 aa4.97□□□□□ -1.61
CLUHP3-206ENST00000562354 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
CLUHP3-206ENST00000562354 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
CLUHP3-206ENST00000562354 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
CLUHP3-206ENST00000562354 H0YAA0 97 aa4.93□□□□□ -1.62
CLUHP3-206ENST00000562354 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.63
CLUHP3-206ENST00000562354 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
CLUHP3-206ENST00000562354 LYSTQ99698 3801 aa4.88□□□□□ -1.63
CLUHP3-206ENST00000562354 M0QZ58 72 aa4.86□□□□□ -1.63
CLUHP3-206ENST00000562354 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
CLUHP3-206ENST00000562354 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
CLUHP3-206ENST00000562354 KMT2AQ03164 3969 aa4.85□□□□□ -1.63
CLUHP3-206ENST00000562354 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
CLUHP3-206ENST00000562354 R4GN34 69 aa4.81□□□□□ -1.64
CLUHP3-206ENST00000562354 P0C880 135 aa4.8□□□□□ -1.64
CLUHP3-206ENST00000562354 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
CLUHP3-206ENST00000562354 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
CLUHP3-206ENST00000562354 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
CLUHP3-206ENST00000562354 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
CLUHP3-206ENST00000562354 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
CLUHP3-206ENST00000562354 RYR3Q15413 4870 aa4.75□□□□□ -1.65
CLUHP3-206ENST00000562354 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms