RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 XP32Q5T750 250 aa6.05□□□□□ -1.44
RPAP1-204ENST00000562303 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
RPAP1-204ENST00000562303 UBR5O95071 2799 aaPredicted RBP6.03□□□□□ -1.44
RPAP1-204ENST00000562303 PP632Q6XCG6 107 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 ITPR2Q14571 2701 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 MYO15AQ9UKN7 3530 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 KRTAP10-10P60014 251 aa6□□□□□ -1.45
RPAP1-204ENST00000562303 BOD1L1Q8NFC6 3051 aa5.99□□□□□ -1.45
RPAP1-204ENST00000562303 COL6A3P12111 3177 aa5.99□□□□□ -1.45
RPAP1-204ENST00000562303 DMXL2Q8TDJ6 3036 aa5.98□□□□□ -1.45
RPAP1-204ENST00000562303 FRYLO94915 3013 aa5.97□□□□□ -1.45
RPAP1-204ENST00000562303 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 ATMQ13315 3056 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 TACC2O95359 2948 aa5.95□□□□□ -1.46
RPAP1-204ENST00000562303 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
RPAP1-204ENST00000562303 ADGRG4Q8IZF6 3080 aa5.94□□□□□ -1.46
RPAP1-204ENST00000562303 LRBAP50851 2863 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 CFAP47Q6ZTR5 3102 aa5.93□□□□□ -1.46
RPAP1-204ENST00000562303 ASH1LQ9NR48 2969 aaKnown RBP5.91□□□□□ -1.46
RPAP1-204ENST00000562303 COL12A1Q99715 3063 aa5.88□□□□□ -1.47
RPAP1-204ENST00000562303 KMT2BQ9UMN6 2715 aaPredicted RBP5.88□□□□□ -1.47
RPAP1-204ENST00000562303 EYSQ5T1H1 3165 aa5.87□□□□□ -1.47
RPAP1-204ENST00000562303 REV3LO60673 3130 aa5.87□□□□□ -1.47
RPAP1-204ENST00000562303 ITPR1Q14643 2758 aa5.86□□□□□ -1.47
RPAP1-204ENST00000562303 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
RPAP1-204ENST00000562303 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
RPAP1-204ENST00000562303 FLNCQ14315 2725 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 H0YAA0 97 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 P0C880 135 aa5.81□□□□□ -1.48
RPAP1-204ENST00000562303 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
RPAP1-204ENST00000562303 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
RPAP1-204ENST00000562303 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
RPAP1-204ENST00000562303 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
RPAP1-204ENST00000562303 HIVEP1P15822 2718 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 WDFY3Q8IZQ1 3526 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 APCP25054 2843 aa5.77□□□□□ -1.49
RPAP1-204ENST00000562303 CRYBG3Q68DQ2 2970 aa5.73□□□□□ -1.49
RPAP1-204ENST00000562303 CELSR2Q9HCU4 2923 aa5.7□□□□□ -1.5
RPAP1-204ENST00000562303 LOC400499M0QZD8 3231 aa5.66□□□□□ -1.5
RPAP1-204ENST00000562303 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
RPAP1-204ENST00000562303 DCHS1Q96JQ0 3298 aa5.65□□□□□ -1.51
RPAP1-204ENST00000562303 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
RPAP1-204ENST00000562303 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
RPAP1-204ENST00000562303 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
RPAP1-204ENST00000562303 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
RPAP1-204ENST00000562303 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.51
RPAP1-204ENST00000562303 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
RPAP1-204ENST00000562303 FBN2P35556 2912 aa5.55□□□□□ -1.52
RPAP1-204ENST00000562303 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
RPAP1-204ENST00000562303 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
RPAP1-204ENST00000562303 TENM3Q9P273 2699 aa5.5□□□□□ -1.53
RPAP1-204ENST00000562303 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
RPAP1-204ENST00000562303 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
RPAP1-204ENST00000562303 NF1P21359 2839 aa5.48□□□□□ -1.53
RPAP1-204ENST00000562303 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
RPAP1-204ENST00000562303 CSMD1Q96PZ7 3565 aa5.46□□□□□ -1.53
RPAP1-204ENST00000562303 RELNP78509 3460 aa5.46□□□□□ -1.54
RPAP1-204ENST00000562303 LAMA5O15230 3695 aa5.42□□□□□ -1.54
RPAP1-204ENST00000562303 DMDP11532 3685 aa5.41□□□□□ -1.54
RPAP1-204ENST00000562303 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
RPAP1-204ENST00000562303 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
RPAP1-204ENST00000562303 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
RPAP1-204ENST00000562303 TGP01266 2768 aa5.36□□□□□ -1.55
RPAP1-204ENST00000562303 CELSR1Q9NYQ6 3014 aa5.34□□□□□ -1.55
RPAP1-204ENST00000562303 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
RPAP1-204ENST00000562303 CUBNO60494 3623 aa5.31□□□□□ -1.56
RPAP1-204ENST00000562303 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
RPAP1-204ENST00000562303 MUC3AQ02505 3323 aa5.28□□□□□ -1.56
RPAP1-204ENST00000562303 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
RPAP1-204ENST00000562303 SPENQ96T58 3664 aaKnown RBP5.22□□□□□ -1.57
RPAP1-204ENST00000562303 PKD1L1Q8TDX9 2849 aa5.21□□□□□ -1.57
RPAP1-204ENST00000562303 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
RPAP1-204ENST00000562303 PDZD2O15018 2839 aa5.21□□□□□ -1.58
RPAP1-204ENST00000562303 VWFP04275 2813 aa5.16□□□□□ -1.58
RPAP1-204ENST00000562303 NBPF19A0A087WUL8 3843 aa5.14□□□□□ -1.59
RPAP1-204ENST00000562303 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
RPAP1-204ENST00000562303 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
RPAP1-204ENST00000562303 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
RPAP1-204ENST00000562303 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
RPAP1-204ENST00000562303 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
RPAP1-204ENST00000562303 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
RPAP1-204ENST00000562303 INE1O15225 51 aa4.98□□□□□ -1.61
RPAP1-204ENST00000562303 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
RPAP1-204ENST00000562303 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
RPAP1-204ENST00000562303 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
RPAP1-204ENST00000562303 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
RPAP1-204ENST00000562303 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.63
RPAP1-204ENST00000562303 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
RPAP1-204ENST00000562303 TRRAPQ9Y4A5 3859 aa4.84□□□□□ -1.63
RPAP1-204ENST00000562303 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
RPAP1-204ENST00000562303 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
RPAP1-204ENST00000562303 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
RPAP1-204ENST00000562303 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
RPAP1-204ENST00000562303 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
RPAP1-204ENST00000562303 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
RPAP1-204ENST00000562303 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
RPAP1-204ENST00000562303 VPS13CQ709C8 3753 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms