RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 LRP1BQ9NZR2 4599 aa7.36□□□□□ -1.23
AC055717.2-201ENST00000561864 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
AC055717.2-201ENST00000561864 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
AC055717.2-201ENST00000561864 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
AC055717.2-201ENST00000561864 H0Y9P7 68 aa7.33□□□□□ -1.24
AC055717.2-201ENST00000561864 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
AC055717.2-201ENST00000561864 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
AC055717.2-201ENST00000561864 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
AC055717.2-201ENST00000561864 SERP1Q9Y6X1 66 aa7.31□□□□□ -1.24
AC055717.2-201ENST00000561864 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
AC055717.2-201ENST00000561864 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
AC055717.2-201ENST00000561864 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
AC055717.2-201ENST00000561864 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
AC055717.2-201ENST00000561864 SPINK1P00995 79 aa7.28□□□□□ -1.24
AC055717.2-201ENST00000561864 LINC00208Q96KT6 92 aa7.28□□□□□ -1.24
AC055717.2-201ENST00000561864 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
AC055717.2-201ENST00000561864 KRTAP10-4P60372 401 aaPredicted RBP7.27□□□□□ -1.25
AC055717.2-201ENST00000561864 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
AC055717.2-201ENST00000561864 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
AC055717.2-201ENST00000561864 NDUFS5O43920 106 aa7.25□□□□□ -1.25
AC055717.2-201ENST00000561864 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
AC055717.2-201ENST00000561864 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
AC055717.2-201ENST00000561864 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
AC055717.2-201ENST00000561864 OXTP01178 125 aa7.23□□□□□ -1.25
AC055717.2-201ENST00000561864 PRR26Q8N8Z3 221 aa7.23□□□□□ -1.25
AC055717.2-201ENST00000561864 LINC00313P59037 77 aa7.21□□□□□ -1.26
AC055717.2-201ENST00000561864 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.26
AC055717.2-201ENST00000561864 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
AC055717.2-201ENST00000561864 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
AC055717.2-201ENST00000561864 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
AC055717.2-201ENST00000561864 APOBP04114 4563 aaKnown RBP7.19□□□□□ -1.26
AC055717.2-201ENST00000561864 VPS13BQ7Z7G8 4022 aa7.17□□□□□ -1.26
AC055717.2-201ENST00000561864 FAM229AH3BQW9 127 aa7.16□□□□□ -1.26
AC055717.2-201ENST00000561864 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
AC055717.2-201ENST00000561864 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
AC055717.2-201ENST00000561864 LOC101927531A0A1B0GV80 90 aa7.15□□□□□ -1.26
AC055717.2-201ENST00000561864 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.26
AC055717.2-201ENST00000561864 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
AC055717.2-201ENST00000561864 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
AC055717.2-201ENST00000561864 Q5W150 140 aa7.1□□□□□ -1.27
AC055717.2-201ENST00000561864 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
AC055717.2-201ENST00000561864 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
AC055717.2-201ENST00000561864 PRR4Q16378 134 aa7.08□□□□□ -1.28
AC055717.2-201ENST00000561864 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
AC055717.2-201ENST00000561864 RYR1P21817 5038 aa7.07□□□□□ -1.28
AC055717.2-201ENST00000561864 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
AC055717.2-201ENST00000561864 Q5VSD8 79 aa7.07□□□□□ -1.28
AC055717.2-201ENST00000561864 Q8N1X5 172 aa7.05□□□□□ -1.28
AC055717.2-201ENST00000561864 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
AC055717.2-201ENST00000561864 FAT1Q14517 4588 aa7.03□□□□□ -1.28
AC055717.2-201ENST00000561864 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
AC055717.2-201ENST00000561864 HERC2O95714 4834 aa7.01□□□□□ -1.29
AC055717.2-201ENST00000561864 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
AC055717.2-201ENST00000561864 HSPG2P98160 4391 aa7□□□□□ -1.29
AC055717.2-201ENST00000561864 KRTAP10-8P60410 259 aa7□□□□□ -1.29
AC055717.2-201ENST00000561864 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
AC055717.2-201ENST00000561864 COA5Q86WW8 74 aa6.97□□□□□ -1.29
AC055717.2-201ENST00000561864 A8MUU9 505 aa6.96□□□□□ -1.3
AC055717.2-201ENST00000561864 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
AC055717.2-201ENST00000561864 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
AC055717.2-201ENST00000561864 HRES1P13985 223 aa6.94□□□□□ -1.3
AC055717.2-201ENST00000561864 Q1T7F1 81 aa6.94□□□□□ -1.3
AC055717.2-201ENST00000561864 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
AC055717.2-201ENST00000561864 V9GYY9 64 aa6.93□□□□□ -1.3
AC055717.2-201ENST00000561864 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
AC055717.2-201ENST00000561864 IGKV2D-30A0A075B6S6 120 aa6.91□□□□□ -1.3
AC055717.2-201ENST00000561864 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
AC055717.2-201ENST00000561864 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
AC055717.2-201ENST00000561864 ACYP2P14621 99 aa6.89□□□□□ -1.31
AC055717.2-201ENST00000561864 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
AC055717.2-201ENST00000561864 Q75L30 129 aa6.87□□□□□ -1.31
AC055717.2-201ENST00000561864 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
AC055717.2-201ENST00000561864 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.31
AC055717.2-201ENST00000561864 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
AC055717.2-201ENST00000561864 TNXBP22105 4242 aa6.8□□□□□ -1.32
AC055717.2-201ENST00000561864 A8MUN3 132 aa6.8□□□□□ -1.32
AC055717.2-201ENST00000561864 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
AC055717.2-201ENST00000561864 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
AC055717.2-201ENST00000561864 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
AC055717.2-201ENST00000561864 PSPHP1O15172 72 aa6.76□□□□□ -1.33
AC055717.2-201ENST00000561864 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
AC055717.2-201ENST00000561864 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
AC055717.2-201ENST00000561864 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
AC055717.2-201ENST00000561864 SPINK7P58062 85 aa6.73□□□□□ -1.33
AC055717.2-201ENST00000561864 Q5VV11 94 aa6.73□□□□□ -1.33
AC055717.2-201ENST00000561864 ATP11AUNQ6ZP68 121 aa6.73□□□□□ -1.33
AC055717.2-201ENST00000561864 XP32Q5T750 250 aa6.71□□□□□ -1.34
AC055717.2-201ENST00000561864 MYCBP2O75592 4640 aa6.71□□□□□ -1.34
AC055717.2-201ENST00000561864 J3QL48 77 aa6.7□□□□□ -1.34
AC055717.2-201ENST00000561864 SVIPQ8NHG7 77 aa6.68□□□□□ -1.34
AC055717.2-201ENST00000561864 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
AC055717.2-201ENST00000561864 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
AC055717.2-201ENST00000561864 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
AC055717.2-201ENST00000561864 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
AC055717.2-201ENST00000561864 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
AC055717.2-201ENST00000561864 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
AC055717.2-201ENST00000561864 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
AC055717.2-201ENST00000561864 A6NED7 52 aa6.59□□□□□ -1.35
AC055717.2-201ENST00000561864 A0A1B0GU69 56 aa6.58□□□□□ -1.36
AC055717.2-201ENST00000561864 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms