RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 DEFB131BA0A096LNP1 70 aa-3.25□□□□□ -2.93
CASC4-211ENST00000561305 NDUFB1O75438 58 aa-3.25□□□□□ -2.93
CASC4-211ENST00000561305 ERVK-7P63135 1459 aa-3.25□□□□□ -2.93
CASC4-211ENST00000561305 RPL13AP3Q6NVV1 102 aa-3.26□□□□□ -2.93
CASC4-211ENST00000561305 ROCK2O75116 1388 aaKnown RBP-3.26□□□□□ -2.93
CASC4-211ENST00000561305 CLTCQ00610 1675 aaKnown RBP-3.27□□□□□ -2.93
CASC4-211ENST00000561305 EPRSP07814 1512 aaKnown RBP-3.27□□□□□ -2.93
CASC4-211ENST00000561305 UQCRHLA0A096LP55 91 aa-3.27□□□□□ -2.93
CASC4-211ENST00000561305 ATOX1O00244 68 aa-3.27□□□□□ -2.93
CASC4-211ENST00000561305 CCDC88BA6NC98 1476 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 PZPP20742 1482 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 HMGN2P05204 90 aaKnown RBP-3.28□□□□□ -2.93
CASC4-211ENST00000561305 PPP3R1P63098 170 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 ACBD7Q8N6N7 88 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 PMCHL2Q9BQD1 86 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 CEP350Q5VT06 3117 aa-3.28□□□□□ -2.93
CASC4-211ENST00000561305 NDUFA4O00483 81 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 IFI27P40305 119 aaPredicted RBP-3.29□□□□□ -2.94
CASC4-211ENST00000561305 GNG4P50150 75 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 MINOS1Q5TGZ0 78 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 LEAP2Q969E1 77 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 NCOA2Q15596 1464 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 CD163L1Q9NR16 1453 aa-3.29□□□□□ -2.94
CASC4-211ENST00000561305 MRPL33O75394 65 aaKnown RBP-3.3□□□□□ -2.94
CASC4-211ENST00000561305 FANCAO15360 1455 aa-3.3□□□□□ -2.94
CASC4-211ENST00000561305 PCNTO95613 3336 aa-3.31□□□□□ -2.94
CASC4-211ENST00000561305 MED14O60244 1454 aa-3.31□□□□□ -2.94
CASC4-211ENST00000561305 NALCNQ8IZF0 1738 aa-3.31□□□□□ -2.94
CASC4-211ENST00000561305 ARFGEF2Q9Y6D5 1785 aa-3.31□□□□□ -2.94
CASC4-211ENST00000561305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.32□□□□□ -2.94
CASC4-211ENST00000561305 NCBP2-AS2Q69YL0 99 aa-3.33□□□□□ -2.94
CASC4-211ENST00000561305 C20orf78Q9BR46 151 aa-3.33□□□□□ -2.94
CASC4-211ENST00000561305 FRYLO94915 3013 aa-3.34□□□□□ -2.94
CASC4-211ENST00000561305 NDUFA2O43678 99 aa-3.35□□□□□ -2.95
CASC4-211ENST00000561305 SFTA3P0C7M3 94 aa-3.35□□□□□ -2.95
CASC4-211ENST00000561305 COL5A1-AS1Q5SY13 56 aa-3.35□□□□□ -2.95
CASC4-211ENST00000561305 NRAPQ86VF7 1730 aa-3.36□□□□□ -2.95
CASC4-211ENST00000561305 UBR1Q8IWV7 1749 aa-3.36□□□□□ -2.95
CASC4-211ENST00000561305 RNF17Q9BXT8 1623 aaKnown RBP-3.36□□□□□ -2.95
CASC4-211ENST00000561305 INO80Q9ULG1 1556 aaPredicted RBP-3.36□□□□□ -2.95
CASC4-211ENST00000561305 UMAD1C9J7I0 102 aa-3.36□□□□□ -2.95
CASC4-211ENST00000561305 C6orf48Q9UBA6 75 aa-3.36□□□□□ -2.95
CASC4-211ENST00000561305 NEXMIFQ5QGS0 1516 aa-3.36□□□□□ -2.95
CASC4-211ENST00000561305 URB2Q14146 1524 aaKnown RBP-3.37□□□□□ -2.95
CASC4-211ENST00000561305 LINC00032P0C843 101 aa-3.37□□□□□ -2.95
CASC4-211ENST00000561305 FCER1GP30273 86 aa-3.37□□□□□ -2.95
CASC4-211ENST00000561305 CRIP1P50238 77 aa-3.37□□□□□ -2.95
CASC4-211ENST00000561305 MRPS10P82664 201 aaKnown RBP-3.37□□□□□ -2.95
CASC4-211ENST00000561305 MAP3K4Q9Y6R4 1608 aa-3.37□□□□□ -2.95
CASC4-211ENST00000561305 TJP1Q07157 1748 aa-3.38□□□□□ -2.95
CASC4-211ENST00000561305 CORTO00230 105 aa-3.39□□□□□ -2.95
CASC4-211ENST00000561305 FAUP35544 74 aaKnown RBP-3.39□□□□□ -2.95
CASC4-211ENST00000561305 SMIM11AP58511 58 aa-3.39□□□□□ -2.95
CASC4-211ENST00000561305 SARNPP82979 210 aaKnown RBP-3.39□□□□□ -2.95
CASC4-211ENST00000561305 SZT2Q5T011 3432 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 PIK3C2BO00750 1634 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 KIF21BO75037 1637 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 MYO3AQ8NEV4 1616 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 MYMXA0A1B0GTQ4 84 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 PEA15Q15121 130 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 GTF2H5Q6ZYL4 71 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 DPY30Q9C005 99 aa-3.4□□□□□ -2.95
CASC4-211ENST00000561305 HFM1A2PYH4 1435 aa-3.41□□□□□ -2.96
CASC4-211ENST00000561305 KCNQ1DNQ9H478 68 aa-3.41□□□□□ -2.96
CASC4-211ENST00000561305 CROCC2H7BZ55 1655 aa-3.41□□□□□ -2.96
CASC4-211ENST00000561305 ARHGAP35Q9NRY4 1499 aa-3.41□□□□□ -2.96
CASC4-211ENST00000561305 S100A1P23297 94 aa-3.42□□□□□ -2.96
CASC4-211ENST00000561305 TMEM203Q969S6 136 aa-3.42□□□□□ -2.96
CASC4-211ENST00000561305 TSC22D3Q99576 134 aa-3.43□□□□□ -2.96
CASC4-211ENST00000561305 PPLO60437 1756 aa-3.43□□□□□ -2.96
CASC4-211ENST00000561305 DLEU1O43261 78 aa-3.44□□□□□ -2.96
CASC4-211ENST00000561305 HMGA1P17096 107 aaKnown RBP-3.44□□□□□ -2.96
CASC4-211ENST00000561305 UBL5Q9BZL1 73 aa-3.44□□□□□ -2.96
CASC4-211ENST00000561305 RICTORQ6R327 1708 aa-3.44□□□□□ -2.96
CASC4-211ENST00000561305 NREPQ16612 68 aa-3.45□□□□□ -2.96
CASC4-211ENST00000561305 CEBPZOSA8MTT3 80 aa-3.46□□□□□ -2.96
CASC4-211ENST00000561305 RABAC1Q9UI14 185 aa-3.46□□□□□ -2.96
CASC4-211ENST00000561305 EP400Q96L91 3159 aa-3.47□□□□□ -2.96
CASC4-211ENST00000561305 KIF14Q15058 1648 aa-3.47□□□□□ -2.96
CASC4-211ENST00000561305 WDFY4Q6ZS81 3184 aa-3.47□□□□□ -2.96
CASC4-211ENST00000561305 ZFYVE16Q7Z3T8 1539 aa-3.47□□□□□ -2.96
CASC4-211ENST00000561305 LOC105371267A0A1B0GV96 52 aa-3.48□□□□□ -2.97
CASC4-211ENST00000561305 MUC3AQ02505 3323 aa-3.48□□□□□ -2.97
CASC4-211ENST00000561305 PREX2Q70Z35 1606 aa-3.48□□□□□ -2.97
CASC4-211ENST00000561305 CFAP43Q8NDM7 1665 aa-3.49□□□□□ -2.97
CASC4-211ENST00000561305 MYO5CQ9NQX4 1742 aa-3.5□□□□□ -2.97
CASC4-211ENST00000561305 RALGAPBQ86X10 1494 aa-3.5□□□□□ -2.97
CASC4-211ENST00000561305 ASXL1Q8IXJ9 1541 aa-3.5□□□□□ -2.97
CASC4-211ENST00000561305 A0A1B0GV90 55 aa-3.51□□□□□ -2.97
CASC4-211ENST00000561305 NHSQ6T4R5 1651 aa-3.53□□□□□ -2.97
CASC4-211ENST00000561305 CEP162Q5TB80 1403 aa-3.53□□□□□ -2.98
CASC4-211ENST00000561305 RBP2P50120 134 aa-3.54□□□□□ -2.98
CASC4-211ENST00000561305 CLASP1Q7Z460 1538 aa-3.54□□□□□ -2.98
CASC4-211ENST00000561305 UNC13AQ9UPW8 1703 aa-3.55□□□□□ -2.98
CASC4-211ENST00000561305 CEP250Q9BV73 2442 aa-3.55□□□□□ -2.98
CASC4-211ENST00000561305 ETDCA0A1B0GVM5 59 aa-3.55□□□□□ -2.98
CASC4-211ENST00000561305 GNG8Q9UK08 70 aa-3.55□□□□□ -2.98
CASC4-211ENST00000561305 LINC00643Q86TS7 51 aa-3.56□□□□□ -2.98
CASC4-211ENST00000561305 FAM208AQ9UK61 1670 aaKnown RBP-3.56□□□□□ -2.98
CASC4-211ENST00000561305 PVALEFA0A1B0GWK0 134 aa-3.57□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms