RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NCBP2-AS2Q69YL0 99 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 DEFB106AQ8N104 65 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 CNTRLQ7Z7A1 2325 aa0.8□□□□□ -2.28
RTF1-207ENST00000561076 FLG2Q5D862 2391 aaPredicted RBP0.79□□□□□ -2.28
RTF1-207ENST00000561076 FXYD6Q9H0Q3 95 aa0.79□□□□□ -2.28
RTF1-207ENST00000561076 WNK1Q9H4A3 2382 aa0.79□□□□□ -2.28
RTF1-207ENST00000561076 HYDINQ4G0P3 5121 aa0.79□□□□□ -2.28
RTF1-207ENST00000561076 ZANQ9Y493 2812 aa0.79□□□□□ -2.28
RTF1-207ENST00000561076 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
RTF1-207ENST00000561076 ANKRD36A6QL64 1941 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 EPPK1P58107 5090 aaKnown RBP0.78□□□□□ -2.28
RTF1-207ENST00000561076 TACC2O95359 2948 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 KRTAP12-4P60329 112 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 DEFB110Q30KQ9 67 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 KRTAP6-3Q3LI67 103 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 KRTAP5-3Q6L8H2 238 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 COX14Q96I36 57 aa0.78□□□□□ -2.28
RTF1-207ENST00000561076 KMT2CQ8NEZ4 4911 aaKnown RBP0.77□□□□□ -2.29
RTF1-207ENST00000561076 RYR2Q92736 4967 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
RTF1-207ENST00000561076 NSD1Q96L73 2696 aaPredicted RBP0.77□□□□□ -2.29
RTF1-207ENST00000561076 PRRC2CQ9Y520 2896 aaKnown RBP0.77□□□□□ -2.29
RTF1-207ENST00000561076 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 LCE6AA0A183 80 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 ETDCA0A1B0GVM5 59 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 DEFB108AA8MXU0 73 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 K7EQZ3 153 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 MRPL34Q9BQ48 92 aaKnown RBP0.77□□□□□ -2.29
RTF1-207ENST00000561076 CRCT1Q9UGL9 99 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 AKAP6Q13023 2319 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 MXRA5Q9NR99 2828 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 ANK2Q01484 3957 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 HERC2O95714 4834 aa0.77□□□□□ -2.29
RTF1-207ENST00000561076 CACNA1CQ13936 2221 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 KRTAP9-6A8MVA2 160 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 H0YGG7 62 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 I3L2K1 104 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 K7EMI3 77 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 COX6B2Q6YFQ2 88 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 CDKN2A-AS1Q9UH64 79 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 CUBNO60494 3623 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 MEGF8Q7Z7M0 2845 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 SORL1Q92673 2214 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 HERC1Q15751 4861 aa0.76□□□□□ -2.29
RTF1-207ENST00000561076 MUC2Q02817 5179 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 USF3Q68DE3 2245 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 DEFB131BA0A096LNP1 70 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 SNRPGP15A8MWD9 76 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 SPINK4O60575 86 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 PRH1P02810 166 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 DEFB114Q30KQ6 69 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 APLNQ9ULZ1 77 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 MAP1AP78559 2803 aaPredicted RBP0.75□□□□□ -2.29
RTF1-207ENST00000561076 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 VPS13CQ709C8 3753 aa0.75□□□□□ -2.29
RTF1-207ENST00000561076 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
RTF1-207ENST00000561076 A0A0D9SG42 100 aa0.74□□□□□ -2.29
RTF1-207ENST00000561076 KCNQ1DNQ9H478 68 aa0.74□□□□□ -2.29
RTF1-207ENST00000561076 ABCA13Q86UQ4 5058 aa0.74□□□□□ -2.29
RTF1-207ENST00000561076 TRRAPQ9Y4A5 3859 aa0.74□□□□□ -2.29
RTF1-207ENST00000561076 M0R1W7 72 aa0.73□□□□□ -2.29
RTF1-207ENST00000561076 PLNP26678 52 aa0.73□□□□□ -2.29
RTF1-207ENST00000561076 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
RTF1-207ENST00000561076 ROS1P08922 2347 aa0.73□□□□□ -2.29
RTF1-207ENST00000561076 SVEP1Q4LDE5 3571 aa0.72□□□□□ -2.29
RTF1-207ENST00000561076 LYNX1G3V0Z9 82 aa0.72□□□□□ -2.29
RTF1-207ENST00000561076 Q5VSD8 79 aa0.72□□□□□ -2.29
RTF1-207ENST00000561076 CMC2Q9NRP2 79 aa0.72□□□□□ -2.29
RTF1-207ENST00000561076 ANK3Q12955 4377 aaKnown RBP0.72□□□□□ -2.29
RTF1-207ENST00000561076 PRKDCP78527 4128 aaKnown RBP0.71□□□□□ -2.3
RTF1-207ENST00000561076 H0YGX0 51 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 NDUFA3O95167 84 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 LINC00158P58513 81 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 KRTAP20-1Q3LI63 56 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 LCE3AQ5TA76 89 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 DEFB108BQ8NET1 73 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 PLCE1Q9P212 2302 aa0.71□□□□□ -2.3
RTF1-207ENST00000561076 H3BUX3 64 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 SPRR1BP22528 89 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 TOMM5Q8N4H5 51 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 TMEM167BQ9NRX6 74 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 TNCP24821 2201 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 FSIP2Q5CZC0 6907 aa0.7□□□□□ -2.3
RTF1-207ENST00000561076 H3BSH0 61 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 SPRR1AP35321 89 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 MINOS1Q5TGZ0 78 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 WFDC13Q8IUB5 93 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 WNK2Q9Y3S1 2297 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
RTF1-207ENST00000561076 DMBT1Q9UGM3 2413 aaPredicted RBP0.68□□□□□ -2.3
RTF1-207ENST00000561076 CRIP1P50238 77 aa0.68□□□□□ -2.3
RTF1-207ENST00000561076 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
RTF1-207ENST00000561076 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
RTF1-207ENST00000561076 TIMM8BQ9Y5J9 83 aaPredicted RBP0.68□□□□□ -2.3
RTF1-207ENST00000561076 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
RTF1-207ENST00000561076 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
RTF1-207ENST00000561076 CMYA5Q8N3K9 4069 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms