RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 MOBPQ13875 183 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 Q5XG85 94 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 IGFL1Q6UW32 110 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 IGLV9-49A0A0B4J1Y8 123 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 F8WEM9 126 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 PDE6GP18545 87 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 MTURNQ8N3F0 131 aa3.15□□□□□ -1.91
ZEB1-220ENST00000560909 A0A1B0GW54 56 aa3.14□□□□□ -1.91
ZEB1-220ENST00000560909 SPINK1P00995 79 aa3.14□□□□□ -1.91
ZEB1-220ENST00000560909 Q6ZQT0 140 aa3.14□□□□□ -1.91
ZEB1-220ENST00000560909 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
ZEB1-220ENST00000560909 A0A0G2JQZ4 141 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 TRBV7-7A0A0K0K1E9 115 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 ETDBQ3ZM63 59 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 ASB16-AS1Q495Z4 193 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 C9orf153Q5TBE3 101 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
ZEB1-220ENST00000560909 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
ZEB1-220ENST00000560909 CCKP06307 115 aa3.12□□□□□ -1.91
ZEB1-220ENST00000560909 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
ZEB1-220ENST00000560909 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
ZEB1-220ENST00000560909 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
ZEB1-220ENST00000560909 A0A087WSZ3 146 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 A0A1B0GV72 72 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 FAM240AA0A1B0GVK7 77 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 C1orf195Q5TG92 126 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 Q96NJ1 140 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 LIMD2Q9BT23 127 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 SS18L2Q9UHA2 77 aa3.08□□□□□ -1.92
ZEB1-220ENST00000560909 HRCT1Q6UXD1 115 aa3.07□□□□□ -1.92
ZEB1-220ENST00000560909 FP248Q71RG6 208 aaPredicted RBP3.07□□□□□ -1.92
ZEB1-220ENST00000560909 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
ZEB1-220ENST00000560909 ACYP1P07311 99 aa3.06□□□□□ -1.92
ZEB1-220ENST00000560909 LINC00846Q9NV44 126 aa3.06□□□□□ -1.92
ZEB1-220ENST00000560909 LRP2P98164 4655 aa3.05□□□□□ -1.92
ZEB1-220ENST00000560909 MPLKIPQ8TAP9 179 aa3.05□□□□□ -1.92
ZEB1-220ENST00000560909 VPS25Q9BRG1 176 aa3.05□□□□□ -1.92
ZEB1-220ENST00000560909 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
ZEB1-220ENST00000560909 J3KT08 172 aa3.04□□□□□ -1.92
ZEB1-220ENST00000560909 Q6ZVQ6 151 aa3.04□□□□□ -1.92
ZEB1-220ENST00000560909 J3QR89 54 aa3.03□□□□□ -1.92
ZEB1-220ENST00000560909 NREPQ16612 68 aa3.03□□□□□ -1.92
ZEB1-220ENST00000560909 LPAP08519 4548 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 IGLV7-46A0A075B6I9 117 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 DSCR10P59022 87 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 UBL5Q9BZL1 73 aa3.02□□□□□ -1.93
ZEB1-220ENST00000560909 A8MWP4 228 aa3.01□□□□□ -1.93
ZEB1-220ENST00000560909 K7ERU9 68 aa3.01□□□□□ -1.93
ZEB1-220ENST00000560909 IGKV4-1P06312 121 aa3.01□□□□□ -1.93
ZEB1-220ENST00000560909 CXCL6P80162 114 aa3.01□□□□□ -1.93
ZEB1-220ENST00000560909 IGKV3D-7A0A0C4DH55 119 aa3□□□□□ -1.93
ZEB1-220ENST00000560909 BPY2O14599 106 aa3□□□□□ -1.93
ZEB1-220ENST00000560909 LINC00643Q86TS7 51 aa3□□□□□ -1.93
ZEB1-220ENST00000560909 PRR15Q8IV56 129 aa3□□□□□ -1.93
ZEB1-220ENST00000560909 SIGMAR1Q99720 223 aa3□□□□□ -1.93
ZEB1-220ENST00000560909 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
ZEB1-220ENST00000560909 PRR4Q16378 134 aa2.99□□□□□ -1.93
ZEB1-220ENST00000560909 DEFB116Q30KQ4 102 aa2.99□□□□□ -1.93
ZEB1-220ENST00000560909 ATP5EP2Q5VTU8 51 aa2.99□□□□□ -1.93
ZEB1-220ENST00000560909 MUC17Q685J3 4493 aa2.98□□□□□ -1.93
ZEB1-220ENST00000560909 KRTAP16-1A8MUX0 517 aa2.98□□□□□ -1.93
ZEB1-220ENST00000560909 C8orf87E5RJ46 101 aa2.98□□□□□ -1.93
ZEB1-220ENST00000560909 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
ZEB1-220ENST00000560909 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
ZEB1-220ENST00000560909 NDUFB1O75438 58 aa2.97□□□□□ -1.93
ZEB1-220ENST00000560909 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 A8MUU9 505 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 K7EQZ3 153 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 LINC00313P59037 77 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
ZEB1-220ENST00000560909 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
ZEB1-220ENST00000560909 Q75L30 129 aa2.95□□□□□ -1.94
ZEB1-220ENST00000560909 IMUPQ9GZP8 106 aa2.95□□□□□ -1.94
ZEB1-220ENST00000560909 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
ZEB1-220ENST00000560909 Q8N9L7 120 aa2.94□□□□□ -1.94
ZEB1-220ENST00000560909 C9orf92A6NGG3 77 aa2.93□□□□□ -1.94
ZEB1-220ENST00000560909 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
ZEB1-220ENST00000560909 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
ZEB1-220ENST00000560909 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
ZEB1-220ENST00000560909 HCG22E2RYF7 251 aa2.92□□□□□ -1.94
ZEB1-220ENST00000560909 MT-ATP8P03928 68 aa2.92□□□□□ -1.94
ZEB1-220ENST00000560909 MRPL34Q9BQ48 92 aaKnown RBP2.92□□□□□ -1.94
ZEB1-220ENST00000560909 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
ZEB1-220ENST00000560909 CASC2Q6XLA1 102 aa2.91□□□□□ -1.94
ZEB1-220ENST00000560909 HIST1H4AP62805 103 aaKnown RBP2.9□□□□□ -1.95
ZEB1-220ENST00000560909 A0A087WVE0 104 aa2.89□□□□□ -1.95
ZEB1-220ENST00000560909 SEC61BP60468 96 aaKnown RBP2.89□□□□□ -1.95
ZEB1-220ENST00000560909 MUC2Q02817 5179 aa2.88□□□□□ -1.95
ZEB1-220ENST00000560909 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
ZEB1-220ENST00000560909 ZCCHC13Q8WW36 166 aaKnown RBP2.88□□□□□ -1.95
ZEB1-220ENST00000560909 TP53AIP1Q9HCN2 124 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms