RNA–Protein interactions for RNA: ENST00000560743.1

AC113146.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC113146.2, Length 1,961 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC113146.2-201ENST00000560743 ITPR1Q14643 2758 aa3.6□□□□□ -1.83
AC113146.2-201ENST00000560743 CELSR3Q9NYQ7 3312 aa3.59□□□□□ -1.83
AC113146.2-201ENST00000560743 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
AC113146.2-201ENST00000560743 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
AC113146.2-201ENST00000560743 IGSF10Q6WRI0 2623 aa3.58□□□□□ -1.84
AC113146.2-201ENST00000560743 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
AC113146.2-201ENST00000560743 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
AC113146.2-201ENST00000560743 CEP295Q9C0D2 2601 aa3.57□□□□□ -1.84
AC113146.2-201ENST00000560743 UBR5O95071 2799 aaPredicted RBP3.57□□□□□ -1.84
AC113146.2-201ENST00000560743 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
AC113146.2-201ENST00000560743 LAMA5O15230 3695 aa3.56□□□□□ -1.84
AC113146.2-201ENST00000560743 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
AC113146.2-201ENST00000560743 SPINK1P00995 79 aa3.56□□□□□ -1.84
AC113146.2-201ENST00000560743 C14orf177Q52M58 125 aa3.55□□□□□ -1.84
AC113146.2-201ENST00000560743 FBN2P35556 2912 aa3.54□□□□□ -1.84
AC113146.2-201ENST00000560743 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
AC113146.2-201ENST00000560743 ATMQ13315 3056 aa3.53□□□□□ -1.84
AC113146.2-201ENST00000560743 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
AC113146.2-201ENST00000560743 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
AC113146.2-201ENST00000560743 RELNP78509 3460 aa3.53□□□□□ -1.84
AC113146.2-201ENST00000560743 POLQO75417 2590 aa3.53□□□□□ -1.85
AC113146.2-201ENST00000560743 A0A096LNI7 61 aa3.52□□□□□ -1.85
AC113146.2-201ENST00000560743 CREBBPQ92793 2442 aa3.52□□□□□ -1.85
AC113146.2-201ENST00000560743 SPACA4Q8TDM5 124 aa3.52□□□□□ -1.85
AC113146.2-201ENST00000560743 LRBAP50851 2863 aa3.51□□□□□ -1.85
AC113146.2-201ENST00000560743 PRRC2CQ9Y520 2896 aaKnown RBP3.51□□□□□ -1.85
AC113146.2-201ENST00000560743 R4GN34 69 aa3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 H3BNG1 76 aa3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 LINC01556Q5JQF7 62 aa3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 CELSR1Q9NYQ6 3014 aa3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 NOTCH2Q04721 2471 aa3.49□□□□□ -1.85
AC113146.2-201ENST00000560743 SPG11Q96JI7 2443 aa3.48□□□□□ -1.85
AC113146.2-201ENST00000560743 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
AC113146.2-201ENST00000560743 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
AC113146.2-201ENST00000560743 CRYBG3Q68DQ2 2970 aa3.48□□□□□ -1.85
AC113146.2-201ENST00000560743 SETD2Q9BYW2 2564 aaPredicted RBP3.47□□□□□ -1.85
AC113146.2-201ENST00000560743 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
AC113146.2-201ENST00000560743 NBPF19A0A087WUL8 3843 aa3.46□□□□□ -1.86
AC113146.2-201ENST00000560743 A0A1W2PPR1 153 aa3.45□□□□□ -1.86
AC113146.2-201ENST00000560743 SPART-AS1P0CW21 52 aa3.45□□□□□ -1.86
AC113146.2-201ENST00000560743 ABCA2Q9BZC7 2435 aa3.45□□□□□ -1.86
AC113146.2-201ENST00000560743 NF1P21359 2839 aa3.44□□□□□ -1.86
AC113146.2-201ENST00000560743 J3QKU1 62 aa3.44□□□□□ -1.86
AC113146.2-201ENST00000560743 INE1O15225 51 aa3.44□□□□□ -1.86
AC113146.2-201ENST00000560743 TLN1Q9Y490 2541 aaKnown RBP3.44□□□□□ -1.86
AC113146.2-201ENST00000560743 KRTAP21-3Q3LHN1 58 aa3.43□□□□□ -1.86
AC113146.2-201ENST00000560743 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
AC113146.2-201ENST00000560743 DCHS2Q6V1P9 2916 aa3.42□□□□□ -1.86
AC113146.2-201ENST00000560743 S4R3F8 94 aa3.42□□□□□ -1.86
AC113146.2-201ENST00000560743 HTN3P15516 51 aa3.41□□□□□ -1.86
AC113146.2-201ENST00000560743 ANKHD1Q8IWZ3 2542 aaKnown RBP3.4□□□□□ -1.86
AC113146.2-201ENST00000560743 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.86
AC113146.2-201ENST00000560743 ADGRG4Q8IZF6 3080 aa3.4□□□□□ -1.86
AC113146.2-201ENST00000560743 FBN1P35555 2871 aaKnown RBP3.4□□□□□ -1.87
AC113146.2-201ENST00000560743 HRNRQ86YZ3 2850 aaPredicted RBP3.4□□□□□ -1.87
AC113146.2-201ENST00000560743 APCP25054 2843 aa3.39□□□□□ -1.87
AC113146.2-201ENST00000560743 HIVEP2P31629 2446 aa3.38□□□□□ -1.87
AC113146.2-201ENST00000560743 NBASA2RRP1 2371 aa3.38□□□□□ -1.87
AC113146.2-201ENST00000560743 HIVEP3Q5T1R4 2406 aa3.38□□□□□ -1.87
AC113146.2-201ENST00000560743 DEFB4AO15263 64 aa3.38□□□□□ -1.87
AC113146.2-201ENST00000560743 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
AC113146.2-201ENST00000560743 CSPG4Q6UVK1 2322 aa3.37□□□□□ -1.87
AC113146.2-201ENST00000560743 LRRK2Q5S007 2527 aa3.37□□□□□ -1.87
AC113146.2-201ENST00000560743 APLNQ9ULZ1 77 aa3.37□□□□□ -1.87
AC113146.2-201ENST00000560743 ITPR2Q14571 2701 aa3.36□□□□□ -1.87
AC113146.2-201ENST00000560743 DEFB135Q30KP9 77 aa3.35□□□□□ -1.87
AC113146.2-201ENST00000560743 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
AC113146.2-201ENST00000560743 VWFP04275 2813 aa3.35□□□□□ -1.87
AC113146.2-201ENST00000560743 A0A0D9SG42 100 aa3.34□□□□□ -1.87
AC113146.2-201ENST00000560743 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
AC113146.2-201ENST00000560743 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.87
AC113146.2-201ENST00000560743 F8P00451 2351 aa3.34□□□□□ -1.87
AC113146.2-201ENST00000560743 KRTAP12-2P59991 146 aa3.34□□□□□ -1.88
AC113146.2-201ENST00000560743 KRTAP10-8P60410 259 aa3.34□□□□□ -1.88
AC113146.2-201ENST00000560743 NBEAL1Q6ZS30 2694 aa3.33□□□□□ -1.88
AC113146.2-201ENST00000560743 SVEP1Q4LDE5 3571 aa3.33□□□□□ -1.88
AC113146.2-201ENST00000560743 FN1P02751 2386 aaKnown RBP3.32□□□□□ -1.88
AC113146.2-201ENST00000560743 FLNCQ14315 2725 aa3.32□□□□□ -1.88
AC113146.2-201ENST00000560743 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
AC113146.2-201ENST00000560743 VPS13CQ709C8 3753 aa3.31□□□□□ -1.88
AC113146.2-201ENST00000560743 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
AC113146.2-201ENST00000560743 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
AC113146.2-201ENST00000560743 MTORP42345 2549 aa3.29□□□□□ -1.88
AC113146.2-201ENST00000560743 ATRQ13535 2644 aa3.28□□□□□ -1.88
AC113146.2-201ENST00000560743 CENPEQ02224 2701 aa3.28□□□□□ -1.88
AC113146.2-201ENST00000560743 SRRM2Q9UQ35 2752 aaKnown RBP3.27□□□□□ -1.89
AC113146.2-201ENST00000560743 MAPK1IP1LQ8NDC0 245 aa3.27□□□□□ -1.89
AC113146.2-201ENST00000560743 TLN2Q9Y4G6 2542 aa3.27□□□□□ -1.89
AC113146.2-201ENST00000560743 CCDC168Q8NDH2 2452 aa3.27□□□□□ -1.89
AC113146.2-201ENST00000560743 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
AC113146.2-201ENST00000560743 PDZD2O15018 2839 aa3.25□□□□□ -1.89
AC113146.2-201ENST00000560743 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
AC113146.2-201ENST00000560743 CSMD3Q7Z407 3707 aa3.25□□□□□ -1.89
AC113146.2-201ENST00000560743 HIVEP1P15822 2718 aa3.25□□□□□ -1.89
AC113146.2-201ENST00000560743 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
AC113146.2-201ENST00000560743 SONP18583 2426 aaKnown RBP3.24□□□□□ -1.89
AC113146.2-201ENST00000560743 NIPBLQ6KC79 2804 aaeCLIP3.24□□□□□ -1.89
AC113146.2-201ENST00000560743 CSMD2Q7Z408 3487 aa3.24□□□□□ -1.89
AC113146.2-201ENST00000560743 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms