RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 LIMD2Q9BT23 127 aa11.13□□□□□ -0.63
HMBOX1-215ENST00000560599 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
HMBOX1-215ENST00000560599 MRPL34Q9BQ48 92 aaKnown RBP11.1□□□□□ -0.63
HMBOX1-215ENST00000560599 LRP1BQ9NZR2 4599 aa11.1□□□□□ -0.63
HMBOX1-215ENST00000560599 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
HMBOX1-215ENST00000560599 LINC00208Q96KT6 92 aa11.08□□□□□ -0.64
HMBOX1-215ENST00000560599 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
HMBOX1-215ENST00000560599 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
HMBOX1-215ENST00000560599 OXTP01178 125 aa11.05□□□□□ -0.64
HMBOX1-215ENST00000560599 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
HMBOX1-215ENST00000560599 NDUFS5O43920 106 aa11.02□□□□□ -0.64
HMBOX1-215ENST00000560599 DYNC1H1Q14204 4646 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-215ENST00000560599 C1orf195Q5TG92 126 aa11.01□□□□□ -0.65
HMBOX1-215ENST00000560599 C1orf64Q8NEQ6 169 aa11.01□□□□□ -0.65
HMBOX1-215ENST00000560599 SPINK1P00995 79 aa11□□□□□ -0.65
HMBOX1-215ENST00000560599 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
HMBOX1-215ENST00000560599 SMR3BP02814 79 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-215ENST00000560599 RPS29P62273 56 aaKnown RBP10.96□□□□□ -0.65
HMBOX1-215ENST00000560599 CYP4F30PQ9H0H9 118 aa10.96□□□□□ -0.65
HMBOX1-215ENST00000560599 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
HMBOX1-215ENST00000560599 SPANXA2-OT1Q8N9U9 137 aa10.95□□□□□ -0.66
HMBOX1-215ENST00000560599 LINC00313P59037 77 aa10.94□□□□□ -0.66
HMBOX1-215ENST00000560599 RYR2Q92736 4967 aa10.94□□□□□ -0.66
HMBOX1-215ENST00000560599 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
HMBOX1-215ENST00000560599 SMIM26A0A096LP01 95 aa10.92□□□□□ -0.66
HMBOX1-215ENST00000560599 KRTAP10-4P60372 401 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-215ENST00000560599 PRR26Q8N8Z3 221 aa10.92□□□□□ -0.66
HMBOX1-215ENST00000560599 VPS13BQ7Z7G8 4022 aa10.91□□□□□ -0.66
HMBOX1-215ENST00000560599 PKHD1P08F94 4074 aa10.87□□□□□ -0.67
HMBOX1-215ENST00000560599 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
HMBOX1-215ENST00000560599 APOBP04114 4563 aaKnown RBP10.86□□□□□ -0.67
HMBOX1-215ENST00000560599 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
HMBOX1-215ENST00000560599 FAM229AH3BQW9 127 aa10.83□□□□□ -0.68
HMBOX1-215ENST00000560599 KRTAP13-3Q3SY46 172 aa10.83□□□□□ -0.68
HMBOX1-215ENST00000560599 PRR4Q16378 134 aa10.82□□□□□ -0.68
HMBOX1-215ENST00000560599 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
HMBOX1-215ENST00000560599 IGLV7-46A0A075B6I9 117 aa10.79□□□□□ -0.68
HMBOX1-215ENST00000560599 PCOTHQ58A44 107 aa10.79□□□□□ -0.68
HMBOX1-215ENST00000560599 Q5W150 140 aa10.77□□□□□ -0.68
HMBOX1-215ENST00000560599 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
HMBOX1-215ENST00000560599 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
HMBOX1-215ENST00000560599 C4orf26Q17RF5 130 aa10.67□□□□□ -0.7
HMBOX1-215ENST00000560599 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
HMBOX1-215ENST00000560599 KMT2CQ8NEZ4 4911 aaKnown RBP10.65□□□□□ -0.7
HMBOX1-215ENST00000560599 Q5VSD8 79 aa10.65□□□□□ -0.7
HMBOX1-215ENST00000560599 COA5Q86WW8 74 aa10.62□□□□□ -0.71
HMBOX1-215ENST00000560599 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
HMBOX1-215ENST00000560599 FAT1Q14517 4588 aa10.62□□□□□ -0.71
HMBOX1-215ENST00000560599 MPLKIPQ8TAP9 179 aa10.61□□□□□ -0.71
HMBOX1-215ENST00000560599 Q1T7F1 81 aa10.59□□□□□ -0.71
HMBOX1-215ENST00000560599 V9GYY9 64 aa10.58□□□□□ -0.72
HMBOX1-215ENST00000560599 HRES1P13985 223 aa10.54□□□□□ -0.72
HMBOX1-215ENST00000560599 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
HMBOX1-215ENST00000560599 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
HMBOX1-215ENST00000560599 IGKV2D-30A0A075B6S6 120 aa10.5□□□□□ -0.73
HMBOX1-215ENST00000560599 A8MUU9 505 aa10.5□□□□□ -0.73
HMBOX1-215ENST00000560599 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
HMBOX1-215ENST00000560599 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
HMBOX1-215ENST00000560599 ACYP2P14621 99 aa10.48□□□□□ -0.73
HMBOX1-215ENST00000560599 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
HMBOX1-215ENST00000560599 Q8N1X5 172 aa10.47□□□□□ -0.73
HMBOX1-215ENST00000560599 HSPG2P98160 4391 aa10.45□□□□□ -0.74
HMBOX1-215ENST00000560599 RYR3Q15413 4870 aa10.42□□□□□ -0.74
HMBOX1-215ENST00000560599 RYR1P21817 5038 aa10.41□□□□□ -0.74
HMBOX1-215ENST00000560599 Q75L30 129 aa10.37□□□□□ -0.75
HMBOX1-215ENST00000560599 CHKB-CPT1BH3BT56 60 aa10.36□□□□□ -0.75
HMBOX1-215ENST00000560599 PSPHP1O15172 72 aa10.34□□□□□ -0.75
HMBOX1-215ENST00000560599 FLG2Q5D862 2391 aaPredicted RBP10.33□□□□□ -0.76
HMBOX1-215ENST00000560599 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
HMBOX1-215ENST00000560599 A8MUN3 132 aa10.32□□□□□ -0.76
HMBOX1-215ENST00000560599 SVIPQ8NHG7 77 aa10.32□□□□□ -0.76
HMBOX1-215ENST00000560599 PRR15LQ9BU68 103 aa10.32□□□□□ -0.76
HMBOX1-215ENST00000560599 TNXBP22105 4242 aa10.3□□□□□ -0.76
HMBOX1-215ENST00000560599 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
HMBOX1-215ENST00000560599 Q5VV11 94 aa10.28□□□□□ -0.76
HMBOX1-215ENST00000560599 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
HMBOX1-215ENST00000560599 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
HMBOX1-215ENST00000560599 BRK1Q8WUW1 75 aa10.25□□□□□ -0.77
HMBOX1-215ENST00000560599 PRO0628Q9UI54 55 aa10.24□□□□□ -0.77
HMBOX1-215ENST00000560599 SPINK7P58062 85 aa10.19□□□□□ -0.78
HMBOX1-215ENST00000560599 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-215ENST00000560599 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-215ENST00000560599 ATP11AUNQ6ZP68 121 aa10.17□□□□□ -0.78
HMBOX1-215ENST00000560599 XP32Q5T750 250 aa10.14□□□□□ -0.79
HMBOX1-215ENST00000560599 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
HMBOX1-215ENST00000560599 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
HMBOX1-215ENST00000560599 A6NED7 52 aa10.07□□□□□ -0.8
HMBOX1-215ENST00000560599 A0A1B0GU69 56 aa10.04□□□□□ -0.8
HMBOX1-215ENST00000560599 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
HMBOX1-215ENST00000560599 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
HMBOX1-215ENST00000560599 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
HMBOX1-215ENST00000560599 KRTAP3-1Q9BYR8 98 aa9.99□□□□□ -0.81
HMBOX1-215ENST00000560599 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
HMBOX1-215ENST00000560599 KRTAP4-5Q9BYR2 181 aa9.94□□□□□ -0.82
HMBOX1-215ENST00000560599 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
HMBOX1-215ENST00000560599 MYCBP2O75592 4640 aa9.9□□□□□ -0.82
HMBOX1-215ENST00000560599 SEC61GP60059 68 aa9.9□□□□□ -0.83
HMBOX1-215ENST00000560599 LCA10Q71F78 164 aa9.9□□□□□ -0.83
HMBOX1-215ENST00000560599 A8MU10 97 aa9.82□□□□□ -0.84
HMBOX1-215ENST00000560599 J3QL48 77 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms