RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 ROMO1P60602 79 aa3.86□□□□□ -1.79
ZEB1-217ENST00000559858 ATRQ13535 2644 aa3.86□□□□□ -1.79
ZEB1-217ENST00000559858 HELZ2Q9BYK8 2649 aaKnown RBP3.86□□□□□ -1.79
ZEB1-217ENST00000559858 TRRAPQ9Y4A5 3859 aa3.85□□□□□ -1.79
ZEB1-217ENST00000559858 PANO1I0J062 215 aa3.85□□□□□ -1.79
ZEB1-217ENST00000559858 INAFM1C9JVW0 142 aa3.84□□□□□ -1.79
ZEB1-217ENST00000559858 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.8
ZEB1-217ENST00000559858 A8MUU9 505 aa3.82□□□□□ -1.8
ZEB1-217ENST00000559858 FBN1P35555 2871 aaKnown RBP3.82□□□□□ -1.8
ZEB1-217ENST00000559858 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
ZEB1-217ENST00000559858 UBE2DNLQ8IWF7 75 aa3.81□□□□□ -1.8
ZEB1-217ENST00000559858 SPACA4Q8TDM5 124 aa3.81□□□□□ -1.8
ZEB1-217ENST00000559858 FLNBO75369 2602 aaKnown RBP3.81□□□□□ -1.8
ZEB1-217ENST00000559858 USP24Q9UPU5 2620 aa3.81□□□□□ -1.8
ZEB1-217ENST00000559858 ITPR2Q14571 2701 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 LY6G6CO95867 125 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 PSORS1C2Q9UIG4 136 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 IGLV5-52A0A0A0MRZ9 124 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-217ENST00000559858 LINC00304Q8N9R0 145 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-217ENST00000559858 HECTD1Q9ULT8 2610 aa3.8□□□□□ -1.8
ZEB1-217ENST00000559858 TENM4Q6N022 2769 aa3.78□□□□□ -1.8
ZEB1-217ENST00000559858 SSBP3-AS1Q7Z2R9 100 aa3.78□□□□□ -1.8
ZEB1-217ENST00000559858 DNAH10Q8IVF4 4471 aa3.78□□□□□ -1.8
ZEB1-217ENST00000559858 Q6ZSA8 131 aa3.78□□□□□ -1.8
ZEB1-217ENST00000559858 MAST4O15021 2626 aa3.77□□□□□ -1.81
ZEB1-217ENST00000559858 ANK2Q01484 3957 aa3.77□□□□□ -1.81
ZEB1-217ENST00000559858 H0YAA0 97 aa3.77□□□□□ -1.81
ZEB1-217ENST00000559858 SPINK1P00995 79 aa3.77□□□□□ -1.81
ZEB1-217ENST00000559858 KMT2BQ9UMN6 2715 aaPredicted RBP3.77□□□□□ -1.81
ZEB1-217ENST00000559858 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
ZEB1-217ENST00000559858 COL7A1Q02388 2944 aa3.76□□□□□ -1.81
ZEB1-217ENST00000559858 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
ZEB1-217ENST00000559858 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
ZEB1-217ENST00000559858 FASNP49327 2511 aaKnown RBP3.75□□□□□ -1.81
ZEB1-217ENST00000559858 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
ZEB1-217ENST00000559858 P0C880 135 aa3.74□□□□□ -1.81
ZEB1-217ENST00000559858 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
ZEB1-217ENST00000559858 A0A1B0GU33 70 aa3.73□□□□□ -1.81
ZEB1-217ENST00000559858 Q6ZRN7 208 aaPredicted RBP3.73□□□□□ -1.81
ZEB1-217ENST00000559858 NBEAL1Q6ZS30 2694 aa3.73□□□□□ -1.81
ZEB1-217ENST00000559858 LYSTQ99698 3801 aa3.73□□□□□ -1.81
ZEB1-217ENST00000559858 K7ERS5 55 aa3.72□□□□□ -1.81
ZEB1-217ENST00000559858 Q8N1X5 172 aa3.72□□□□□ -1.81
ZEB1-217ENST00000559858 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
ZEB1-217ENST00000559858 NOTCH1P46531 2555 aa3.7□□□□□ -1.82
ZEB1-217ENST00000559858 DNAH9Q9NYC9 4486 aa3.7□□□□□ -1.82
ZEB1-217ENST00000559858 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
ZEB1-217ENST00000559858 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
ZEB1-217ENST00000559858 COL6A5A8TX70 2615 aa3.7□□□□□ -1.82
ZEB1-217ENST00000559858 TYMSOSQ8TAI1 123 aa3.69□□□□□ -1.82
ZEB1-217ENST00000559858 CRIPTQ9P021 101 aa3.69□□□□□ -1.82
ZEB1-217ENST00000559858 DNAH3Q8TD57 4116 aa3.69□□□□□ -1.82
ZEB1-217ENST00000559858 A0A087WTM6 91 aa3.69□□□□□ -1.82
ZEB1-217ENST00000559858 FLG2Q5D862 2391 aaPredicted RBP3.68□□□□□ -1.82
ZEB1-217ENST00000559858 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
ZEB1-217ENST00000559858 J3QKU1 62 aa3.67□□□□□ -1.82
ZEB1-217ENST00000559858 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
ZEB1-217ENST00000559858 CMYA5Q8N3K9 4069 aa3.67□□□□□ -1.82
ZEB1-217ENST00000559858 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
ZEB1-217ENST00000559858 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
ZEB1-217ENST00000559858 KRTAP24-1Q3LI83 254 aa3.65□□□□□ -1.82
ZEB1-217ENST00000559858 NUPR2A6NF83 97 aa3.64□□□□□ -1.83
ZEB1-217ENST00000559858 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
ZEB1-217ENST00000559858 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
ZEB1-217ENST00000559858 TGP01266 2768 aa3.64□□□□□ -1.83
ZEB1-217ENST00000559858 STAB1Q9NY15 2570 aa3.63□□□□□ -1.83
ZEB1-217ENST00000559858 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
ZEB1-217ENST00000559858 STAB2Q8WWQ8 2551 aa3.62□□□□□ -1.83
ZEB1-217ENST00000559858 COX6B2Q6YFQ2 88 aa3.61□□□□□ -1.83
ZEB1-217ENST00000559858 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
ZEB1-217ENST00000559858 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
ZEB1-217ENST00000559858 KRTAP3-1Q9BYR8 98 aa3.59□□□□□ -1.83
ZEB1-217ENST00000559858 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
ZEB1-217ENST00000559858 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.84
ZEB1-217ENST00000559858 HECTD4Q9Y4D8 3996 aa3.59□□□□□ -1.84
ZEB1-217ENST00000559858 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
ZEB1-217ENST00000559858 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
ZEB1-217ENST00000559858 DNAH7Q8WXX0 4024 aa3.57□□□□□ -1.84
ZEB1-217ENST00000559858 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
ZEB1-217ENST00000559858 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
ZEB1-217ENST00000559858 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
ZEB1-217ENST00000559858 PLECQ15149 4684 aaKnown RBP3.53□□□□□ -1.84
ZEB1-217ENST00000559858 MGAM2Q2M2H8 2515 aa3.52□□□□□ -1.85
ZEB1-217ENST00000559858 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
ZEB1-217ENST00000559858 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
ZEB1-217ENST00000559858 A0A0D9SG42 100 aa3.5□□□□□ -1.85
ZEB1-217ENST00000559858 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
ZEB1-217ENST00000559858 FBN3Q75N90 2809 aa3.49□□□□□ -1.85
ZEB1-217ENST00000559858 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
ZEB1-217ENST00000559858 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
ZEB1-217ENST00000559858 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
ZEB1-217ENST00000559858 DNAH2Q9P225 4427 aa3.46□□□□□ -1.85
ZEB1-217ENST00000559858 PRKDCP78527 4128 aaKnown RBP3.46□□□□□ -1.86
ZEB1-217ENST00000559858 KRTAP10-2P60368 255 aa3.46□□□□□ -1.86
ZEB1-217ENST00000559858 S4R3F8 94 aa3.45□□□□□ -1.86
ZEB1-217ENST00000559858 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
ZEB1-217ENST00000559858 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms