RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 NBPF19A0A087WUL8 3843 aa2.11□□□□□ -2.07
HMGN2P47-201ENST00000559378 RANBP2P49792 3224 aaKnown RBP2.11□□□□□ -2.07
HMGN2P47-201ENST00000559378 HTN3P15516 51 aa2.11□□□□□ -2.07
HMGN2P47-201ENST00000559378 AKAP9Q99996 3911 aa2.1□□□□□ -2.07
HMGN2P47-201ENST00000559378 USP9YO00507 2555 aaPredicted RBP2.1□□□□□ -2.07
HMGN2P47-201ENST00000559378 U3KQA8 63 aa2.1□□□□□ -2.07
HMGN2P47-201ENST00000559378 FRYLO94915 3013 aa2.09□□□□□ -2.07
HMGN2P47-201ENST00000559378 J3QKU1 62 aa2.09□□□□□ -2.07
HMGN2P47-201ENST00000559378 EPG5Q9HCE0 2579 aa2.09□□□□□ -2.07
HMGN2P47-201ENST00000559378 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
HMGN2P47-201ENST00000559378 ATRQ13535 2644 aa2.08□□□□□ -2.08
HMGN2P47-201ENST00000559378 SRCAPQ6ZRS2 3230 aa2.08□□□□□ -2.08
HMGN2P47-201ENST00000559378 USP24Q9UPU5 2620 aa2.07□□□□□ -2.08
HMGN2P47-201ENST00000559378 RPS29P62273 56 aaKnown RBP2.07□□□□□ -2.08
HMGN2P47-201ENST00000559378 BDP1A6H8Y1 2624 aa2.06□□□□□ -2.08
HMGN2P47-201ENST00000559378 ZFHX4Q86UP3 3567 aa2.06□□□□□ -2.08
HMGN2P47-201ENST00000559378 HTTP42858 3142 aa2.06□□□□□ -2.08
HMGN2P47-201ENST00000559378 HELZ2Q9BYK8 2649 aaKnown RBP2.06□□□□□ -2.08
HMGN2P47-201ENST00000559378 CFAP54Q96N23 3096 aa2.06□□□□□ -2.08
HMGN2P47-201ENST00000559378 CACNA1AO00555 2505 aa2.05□□□□□ -2.08
HMGN2P47-201ENST00000559378 M0R2T5 61 aa2.05□□□□□ -2.08
HMGN2P47-201ENST00000559378 ZZEF1O43149 2961 aa2.04□□□□□ -2.08
HMGN2P47-201ENST00000559378 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
HMGN2P47-201ENST00000559378 ITPR3Q14573 2671 aa2.04□□□□□ -2.08
HMGN2P47-201ENST00000559378 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
HMGN2P47-201ENST00000559378 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
HMGN2P47-201ENST00000559378 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
HMGN2P47-201ENST00000559378 BOD1L1Q8NFC6 3051 aa2.02□□□□□ -2.09
HMGN2P47-201ENST00000559378 CHD9Q3L8U1 2897 aa2.02□□□□□ -2.09
HMGN2P47-201ENST00000559378 VPS13AQ96RL7 3174 aa2.01□□□□□ -2.09
HMGN2P47-201ENST00000559378 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
HMGN2P47-201ENST00000559378 C5orf42Q9H799 3197 aa2.01□□□□□ -2.09
HMGN2P47-201ENST00000559378 TRIOO75962 3097 aa2.01□□□□□ -2.09
HMGN2P47-201ENST00000559378 MYCBP2O75592 4640 aa2□□□□□ -2.09
HMGN2P47-201ENST00000559378 ACANP16112 2415 aa2□□□□□ -2.09
HMGN2P47-201ENST00000559378 KRTAP12-3P60328 96 aa2□□□□□ -2.09
HMGN2P47-201ENST00000559378 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
HMGN2P47-201ENST00000559378 SZT2Q5T011 3432 aa2□□□□□ -2.09
HMGN2P47-201ENST00000559378 SETXQ7Z333 2677 aaKnown RBP1.99□□□□□ -2.09
HMGN2P47-201ENST00000559378 NF1P21359 2839 aa1.99□□□□□ -2.09
HMGN2P47-201ENST00000559378 DEFB4AO15263 64 aa1.99□□□□□ -2.09
HMGN2P47-201ENST00000559378 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
HMGN2P47-201ENST00000559378 LRBAP50851 2863 aa1.98□□□□□ -2.09
HMGN2P47-201ENST00000559378 RELNP78509 3460 aa1.97□□□□□ -2.09
HMGN2P47-201ENST00000559378 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
HMGN2P47-201ENST00000559378 DOPEY1Q5JWR5 2465 aa1.97□□□□□ -2.09
HMGN2P47-201ENST00000559378 GOLGB1Q14789 3259 aaKnown RBP1.97□□□□□ -2.09
HMGN2P47-201ENST00000559378 CHD8Q9HCK8 2581 aa1.97□□□□□ -2.09
HMGN2P47-201ENST00000559378 CFAP47Q6ZTR5 3102 aa1.96□□□□□ -2.1
HMGN2P47-201ENST00000559378 COL7A1Q02388 2944 aa1.96□□□□□ -2.1
HMGN2P47-201ENST00000559378 CFAP46Q8IYW2 2715 aa1.96□□□□□ -2.1
HMGN2P47-201ENST00000559378 FRYQ5TBA9 3013 aa1.96□□□□□ -2.1
HMGN2P47-201ENST00000559378 TLN1Q9Y490 2541 aaKnown RBP1.95□□□□□ -2.1
HMGN2P47-201ENST00000559378 CSMD3Q7Z407 3707 aa1.95□□□□□ -2.1
HMGN2P47-201ENST00000559378 FLNCQ14315 2725 aa1.95□□□□□ -2.1
HMGN2P47-201ENST00000559378 CENPEQ02224 2701 aa1.94□□□□□ -2.1
HMGN2P47-201ENST00000559378 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
HMGN2P47-201ENST00000559378 SMR3AQ99954 134 aa1.94□□□□□ -2.1
HMGN2P47-201ENST00000559378 TENM4Q6N022 2769 aa1.94□□□□□ -2.1
HMGN2P47-201ENST00000559378 DCHS2Q6V1P9 2916 aa1.94□□□□□ -2.1
HMGN2P47-201ENST00000559378 SACSQ9NZJ4 4579 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 PDZD2O15018 2839 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 USP9XQ93008 2570 aaPredicted RBP1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 MKI67P46013 3256 aaKnown RBP1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 DMXL1Q9Y485 3027 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 GCN1Q92616 2671 aaKnown RBP1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 TGP01266 2768 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 ATMQ13315 3056 aa1.93□□□□□ -2.1
HMGN2P47-201ENST00000559378 SPTAN1Q13813 2472 aaKnown RBP1.92□□□□□ -2.1
HMGN2P47-201ENST00000559378 MTORP42345 2549 aa1.92□□□□□ -2.1
HMGN2P47-201ENST00000559378 UTP20O75691 2785 aaKnown RBP1.92□□□□□ -2.1
HMGN2P47-201ENST00000559378 NIPBLQ6KC79 2804 aaeCLIP1.91□□□□□ -2.1
HMGN2P47-201ENST00000559378 COL12A1Q99715 3063 aa1.91□□□□□ -2.1
HMGN2P47-201ENST00000559378 SPEGQ15772 3267 aa1.9□□□□□ -2.11
HMGN2P47-201ENST00000559378 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.11
HMGN2P47-201ENST00000559378 LYSTQ99698 3801 aa1.89□□□□□ -2.11
HMGN2P47-201ENST00000559378 KMT2AQ03164 3969 aa1.89□□□□□ -2.11
HMGN2P47-201ENST00000559378 DMDP11532 3685 aa1.88□□□□□ -2.11
HMGN2P47-201ENST00000559378 KALRNO60229 2985 aa1.88□□□□□ -2.11
HMGN2P47-201ENST00000559378 NOTCH2Q04721 2471 aa1.88□□□□□ -2.11
HMGN2P47-201ENST00000559378 APCP25054 2843 aa1.87□□□□□ -2.11
HMGN2P47-201ENST00000559378 DYNC2H1Q8NCM8 4307 aaKnown RBP1.87□□□□□ -2.11
HMGN2P47-201ENST00000559378 DNAH12Q6ZR08 3092 aa1.87□□□□□ -2.11
HMGN2P47-201ENST00000559378 UTRNP46939 3433 aa1.87□□□□□ -2.11
HMGN2P47-201ENST00000559378 DNAH3Q8TD57 4116 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 CELSR3Q9NYQ7 3312 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 STAB1Q9NY15 2570 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 WDFY4Q6ZS81 3184 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 DMXL2Q8TDJ6 3036 aa1.86□□□□□ -2.11
HMGN2P47-201ENST00000559378 ZNF469Q96JG9 3925 aaPredicted RBP1.85□□□□□ -2.11
HMGN2P47-201ENST00000559378 FREM2Q5SZK8 3169 aa1.85□□□□□ -2.11
HMGN2P47-201ENST00000559378 NOTCH1P46531 2555 aa1.85□□□□□ -2.11
HMGN2P47-201ENST00000559378 BSNQ9UPA5 3926 aa1.84□□□□□ -2.11
HMGN2P47-201ENST00000559378 SPTBN5Q9NRC6 3674 aaKnown RBP1.84□□□□□ -2.12
HMGN2P47-201ENST00000559378 TEX15Q9BXT5 2789 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms