RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 IGF2RP11717 2491 aa0.31□□□□□ -2.36
LINC02253-201ENST00000559321 CLTCL1P53675 1640 aa0.31□□□□□ -2.36
LINC02253-201ENST00000559321 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
LINC02253-201ENST00000559321 H3BNG1 76 aa0.3□□□□□ -2.36
LINC02253-201ENST00000559321 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 USP24Q9UPU5 2620 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 SPRR2AP35326 72 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 SNRPGP62308 76 aaKnown RBP0.29□□□□□ -2.36
LINC02253-201ENST00000559321 ACANP16112 2415 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 VPS13BQ7Z7G8 4022 aa0.29□□□□□ -2.36
LINC02253-201ENST00000559321 PKD1L2Q7Z442 2459 aa0.28□□□□□ -2.36
LINC02253-201ENST00000559321 SYNE2Q8WXH0 6885 aaKnown RBP0.28□□□□□ -2.36
LINC02253-201ENST00000559321 TENM3Q9P273 2699 aa0.28□□□□□ -2.36
LINC02253-201ENST00000559321 TNP1P09430 55 aa0.28□□□□□ -2.36
LINC02253-201ENST00000559321 CREBBPQ92793 2442 aa0.28□□□□□ -2.36
LINC02253-201ENST00000559321 A0A0C4DFX4 3053 aa0.28□□□□□ -2.36
LINC02253-201ENST00000559321 CUBNO60494 3623 aa0.27□□□□□ -2.37
LINC02253-201ENST00000559321 MT1AP04731 61 aa0.27□□□□□ -2.37
LINC02253-201ENST00000559321 MAP1BP46821 2468 aaKnown RBP0.27□□□□□ -2.37
LINC02253-201ENST00000559321 NAV2Q8IVL1 2488 aa0.27□□□□□ -2.37
LINC02253-201ENST00000559321 HSPG2P98160 4391 aa0.27□□□□□ -2.37
LINC02253-201ENST00000559321 FLNBO75369 2602 aaKnown RBP0.26□□□□□ -2.37
LINC02253-201ENST00000559321 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
LINC02253-201ENST00000559321 CEP290O15078 2479 aa0.26□□□□□ -2.37
LINC02253-201ENST00000559321 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
LINC02253-201ENST00000559321 NF1P21359 2839 aa0.25□□□□□ -2.37
LINC02253-201ENST00000559321 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
LINC02253-201ENST00000559321 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
LINC02253-201ENST00000559321 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
LINC02253-201ENST00000559321 SACSQ9NZJ4 4579 aa0.25□□□□□ -2.37
LINC02253-201ENST00000559321 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
LINC02253-201ENST00000559321 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
LINC02253-201ENST00000559321 FLNCQ14315 2725 aa0.24□□□□□ -2.37
LINC02253-201ENST00000559321 POLR2KP53803 58 aaKnown RBP0.24□□□□□ -2.37
LINC02253-201ENST00000559321 CLPSL2Q6UWE3 100 aa0.24□□□□□ -2.37
LINC02253-201ENST00000559321 WNK1Q9H4A3 2382 aa0.24□□□□□ -2.37
LINC02253-201ENST00000559321 APC2O95996 2303 aa0.24□□□□□ -2.37
LINC02253-201ENST00000559321 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
LINC02253-201ENST00000559321 PDZD2O15018 2839 aa0.23□□□□□ -2.37
LINC02253-201ENST00000559321 KRTAP6-2Q3LI66 62 aa0.23□□□□□ -2.37
LINC02253-201ENST00000559321 MAST4O15021 2626 aa0.23□□□□□ -2.37
LINC02253-201ENST00000559321 SRRM2Q9UQ35 2752 aaKnown RBP0.23□□□□□ -2.37
LINC02253-201ENST00000559321 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
LINC02253-201ENST00000559321 DUOX1Q9NRD9 1551 aa0.21□□□□□ -2.38
LINC02253-201ENST00000559321 DEFB110Q30KQ9 67 aa0.21□□□□□ -2.38
LINC02253-201ENST00000559321 DNAH3Q8TD57 4116 aa0.21□□□□□ -2.38
LINC02253-201ENST00000559321 PKD1P98161 4303 aa0.21□□□□□ -2.38
LINC02253-201ENST00000559321 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
LINC02253-201ENST00000559321 COL6A3P12111 3177 aa0.2□□□□□ -2.38
LINC02253-201ENST00000559321 SPRR2EP22531 72 aa0.2□□□□□ -2.38
LINC02253-201ENST00000559321 SONP18583 2426 aaKnown RBP0.2□□□□□ -2.38
LINC02253-201ENST00000559321 NBASA2RRP1 2371 aa0.2□□□□□ -2.38
LINC02253-201ENST00000559321 MROH2BQ7Z745 1585 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
LINC02253-201ENST00000559321 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
LINC02253-201ENST00000559321 TACC2O95359 2948 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
LINC02253-201ENST00000559321 KRTAP8-1Q8IUC2 63 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 ZZEF1O43149 2961 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 PKHD1L1Q86WI1 4243 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 DMXL1Q9Y485 3027 aa0.19□□□□□ -2.38
LINC02253-201ENST00000559321 LRP1BQ9NZR2 4599 aa0.18□□□□□ -2.38
LINC02253-201ENST00000559321 SETD2Q9BYW2 2564 aaPredicted RBP0.18□□□□□ -2.38
LINC02253-201ENST00000559321 FAT3Q8TDW7 4589 aa0.18□□□□□ -2.38
LINC02253-201ENST00000559321 GCN1Q92616 2671 aaKnown RBP0.18□□□□□ -2.38
LINC02253-201ENST00000559321 DNAH9Q9NYC9 4486 aa0.17□□□□□ -2.38
LINC02253-201ENST00000559321 SPRR2FQ96RM1 72 aa0.17□□□□□ -2.38
LINC02253-201ENST00000559321 MACF1Q9UPN3 7388 aaKnown RBP0.16□□□□□ -2.38
LINC02253-201ENST00000559321 DNAH11Q96DT5 4516 aa0.16□□□□□ -2.38
LINC02253-201ENST00000559321 MTORP42345 2549 aa0.16□□□□□ -2.38
LINC02253-201ENST00000559321 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
LINC02253-201ENST00000559321 RPL39P62891 51 aaKnown RBP0.16□□□□□ -2.38
LINC02253-201ENST00000559321 PKHD1P08F94 4074 aa0.16□□□□□ -2.38
LINC02253-201ENST00000559321 APOBP04114 4563 aaKnown RBP0.15□□□□□ -2.38
LINC02253-201ENST00000559321 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
LINC02253-201ENST00000559321 RANBP2P49792 3224 aaKnown RBP0.15□□□□□ -2.39
LINC02253-201ENST00000559321 LAMA5O15230 3695 aa0.15□□□□□ -2.39
LINC02253-201ENST00000559321 HMCN2Q8NDA2 5059 aa0.15□□□□□ -2.39
LINC02253-201ENST00000559321 ZANQ9Y493 2812 aa0.14□□□□□ -2.39
LINC02253-201ENST00000559321 TENM2Q9NT68 2774 aa0.14□□□□□ -2.39
LINC02253-201ENST00000559321 SPART-AS1P0CW21 52 aa0.14□□□□□ -2.39
LINC02253-201ENST00000559321 LRP2P98164 4655 aa0.14□□□□□ -2.39
LINC02253-201ENST00000559321 NBPF19A0A087WUL8 3843 aa0.14□□□□□ -2.39
LINC02253-201ENST00000559321 NBEAQ8NFP9 2946 aa0.13□□□□□ -2.39
LINC02253-201ENST00000559321 UTP20O75691 2785 aaKnown RBP0.13□□□□□ -2.39
LINC02253-201ENST00000559321 DYNC2H1Q8NCM8 4307 aaKnown RBP0.12□□□□□ -2.39
LINC02253-201ENST00000559321 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
LINC02253-201ENST00000559321 AKAP9Q99996 3911 aa0.12□□□□□ -2.39
LINC02253-201ENST00000559321 HTTP42858 3142 aa0.12□□□□□ -2.39
LINC02253-201ENST00000559321 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
LINC02253-201ENST00000559321 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
LINC02253-201ENST00000559321 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
LINC02253-201ENST00000559321 DNAH2Q9P225 4427 aa0.11□□□□□ -2.39
LINC02253-201ENST00000559321 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
LINC02253-201ENST00000559321 RPL39LQ96EH5 51 aaKnown RBP0.11□□□□□ -2.39
LINC02253-201ENST00000559321 ACACAQ13085 2346 aa0.1□□□□□ -2.39
LINC02253-201ENST00000559321 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms