RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 LCA10Q71F78 164 aa4.34□□□□□ -1.71
MARK3-212ENST00000558223 STAB2Q8WWQ8 2551 aa4.33□□□□□ -1.72
MARK3-212ENST00000558223 A0A087WSZ3 146 aa4.33□□□□□ -1.72
MARK3-212ENST00000558223 A8MWP4 228 aa4.33□□□□□ -1.72
MARK3-212ENST00000558223 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
MARK3-212ENST00000558223 HRCT1Q6UXD1 115 aa4.33□□□□□ -1.72
MARK3-212ENST00000558223 H3BPC8 53 aa4.32□□□□□ -1.72
MARK3-212ENST00000558223 LY6G6CO95867 125 aa4.32□□□□□ -1.72
MARK3-212ENST00000558223 DSCR10P59022 87 aa4.32□□□□□ -1.72
MARK3-212ENST00000558223 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
MARK3-212ENST00000558223 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
MARK3-212ENST00000558223 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
MARK3-212ENST00000558223 ANK2Q01484 3957 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 LCE6AA0A183 80 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 ADM2Q7Z4H4 148 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 KRTAP11-1Q8IUC1 163 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
MARK3-212ENST00000558223 CMYA5Q8N3K9 4069 aa4.29□□□□□ -1.72
MARK3-212ENST00000558223 H7BZZ5 65 aa4.29□□□□□ -1.72
MARK3-212ENST00000558223 PANO1I0J062 215 aa4.29□□□□□ -1.72
MARK3-212ENST00000558223 LINC00472Q9H8W2 130 aa4.29□□□□□ -1.72
MARK3-212ENST00000558223 K7EQZ3 153 aa4.28□□□□□ -1.72
MARK3-212ENST00000558223 IGLV7-43P04211 117 aa4.28□□□□□ -1.72
MARK3-212ENST00000558223 Q8N9L7 120 aa4.28□□□□□ -1.72
MARK3-212ENST00000558223 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
MARK3-212ENST00000558223 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
MARK3-212ENST00000558223 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
MARK3-212ENST00000558223 MOBPQ13875 183 aa4.26□□□□□ -1.73
MARK3-212ENST00000558223 CASC2Q6XLA1 102 aa4.26□□□□□ -1.73
MARK3-212ENST00000558223 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
MARK3-212ENST00000558223 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
MARK3-212ENST00000558223 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
MARK3-212ENST00000558223 Q5W150 140 aa4.24□□□□□ -1.73
MARK3-212ENST00000558223 Q6ZSA8 131 aa4.24□□□□□ -1.73
MARK3-212ENST00000558223 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
MARK3-212ENST00000558223 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
MARK3-212ENST00000558223 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
MARK3-212ENST00000558223 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
MARK3-212ENST00000558223 Q5XG85 94 aa4.22□□□□□ -1.73
MARK3-212ENST00000558223 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
MARK3-212ENST00000558223 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
MARK3-212ENST00000558223 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
MARK3-212ENST00000558223 DNAH1Q9P2D7 4330 aa4.2□□□□□ -1.74
MARK3-212ENST00000558223 A0A0G2JQZ4 141 aa4.2□□□□□ -1.74
MARK3-212ENST00000558223 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
MARK3-212ENST00000558223 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 A8MUU9 505 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 Q96NJ1 140 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
MARK3-212ENST00000558223 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
MARK3-212ENST00000558223 H0Y9P7 68 aa4.18□□□□□ -1.74
MARK3-212ENST00000558223 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
MARK3-212ENST00000558223 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
MARK3-212ENST00000558223 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
MARK3-212ENST00000558223 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
MARK3-212ENST00000558223 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.75
MARK3-212ENST00000558223 SPAG11AQ6PDA7 123 aa4.15□□□□□ -1.75
MARK3-212ENST00000558223 C1orf64Q8NEQ6 169 aa4.15□□□□□ -1.75
MARK3-212ENST00000558223 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
MARK3-212ENST00000558223 SPINK1P00995 79 aa4.14□□□□□ -1.75
MARK3-212ENST00000558223 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
MARK3-212ENST00000558223 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
MARK3-212ENST00000558223 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
MARK3-212ENST00000558223 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
MARK3-212ENST00000558223 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
MARK3-212ENST00000558223 MEGF8Q7Z7M0 2845 aa4.12□□□□□ -1.75
MARK3-212ENST00000558223 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
MARK3-212ENST00000558223 PLECQ15149 4684 aaKnown RBP4.09□□□□□ -1.75
MARK3-212ENST00000558223 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
MARK3-212ENST00000558223 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
MARK3-212ENST00000558223 FBN3Q75N90 2809 aa4.07□□□□□ -1.76
MARK3-212ENST00000558223 Q1T7F1 81 aa4.07□□□□□ -1.76
MARK3-212ENST00000558223 DNAH7Q8WXX0 4024 aa4.06□□□□□ -1.76
MARK3-212ENST00000558223 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
MARK3-212ENST00000558223 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
MARK3-212ENST00000558223 FP248Q71RG6 208 aaPredicted RBP4.05□□□□□ -1.76
MARK3-212ENST00000558223 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
MARK3-212ENST00000558223 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
MARK3-212ENST00000558223 DNAH6Q9C0G6 4158 aa4.03□□□□□ -1.76
MARK3-212ENST00000558223 TGP01266 2768 aa4.03□□□□□ -1.76
MARK3-212ENST00000558223 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
MARK3-212ENST00000558223 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
MARK3-212ENST00000558223 A0A1B0GVY2 172 aa4.03□□□□□ -1.76
MARK3-212ENST00000558223 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
MARK3-212ENST00000558223 DNAH17Q9UFH2 4485 aa4.02□□□□□ -1.77
MARK3-212ENST00000558223 A0A1B0GU33 70 aa4.02□□□□□ -1.77
MARK3-212ENST00000558223 ACYP2P14621 99 aa4.02□□□□□ -1.77
MARK3-212ENST00000558223 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
MARK3-212ENST00000558223 ALMS1Q8TCU4 4167 aa4.01□□□□□ -1.77
MARK3-212ENST00000558223 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
MARK3-212ENST00000558223 PCOTHQ58A44 107 aa4□□□□□ -1.77
MARK3-212ENST00000558223 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
MARK3-212ENST00000558223 MT3P25713 68 aa3.99□□□□□ -1.77
MARK3-212ENST00000558223 COA5Q86WW8 74 aa3.99□□□□□ -1.77
MARK3-212ENST00000558223 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
MARK3-212ENST00000558223 SRRM2Q9UQ35 2752 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms