RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 KRTAP13-1Q8IUC0 172 aa1.37□□□□□ -2.19
FOXN3-217ENST00000557572 MUC2Q02817 5179 aa1.37□□□□□ -2.19
FOXN3-217ENST00000557572 LCE6AA0A183 80 aa1.36□□□□□ -2.19
FOXN3-217ENST00000557572 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
FOXN3-217ENST00000557572 WFDC9Q8NEX5 89 aa1.36□□□□□ -2.19
FOXN3-217ENST00000557572 LINC01549A6NIU2 74 aa1.35□□□□□ -2.19
FOXN3-217ENST00000557572 GAFA1Q96PS6 74 aa1.35□□□□□ -2.19
FOXN3-217ENST00000557572 HERC1Q15751 4861 aa1.35□□□□□ -2.19
FOXN3-217ENST00000557572 KNL1Q8NG31 2342 aa1.35□□□□□ -2.19
FOXN3-217ENST00000557572 PKDREJQ9NTG1 2253 aa1.35□□□□□ -2.19
FOXN3-217ENST00000557572 HERC2O95714 4834 aa1.34□□□□□ -2.19
FOXN3-217ENST00000557572 NDUFB1O75438 58 aa1.34□□□□□ -2.19
FOXN3-217ENST00000557572 ANKRD36CQ5JPF3 1778 aa1.34□□□□□ -2.2
FOXN3-217ENST00000557572 AKAP6Q13023 2319 aa1.33□□□□□ -2.2
FOXN3-217ENST00000557572 CNTRLQ7Z7A1 2325 aa1.33□□□□□ -2.2
FOXN3-217ENST00000557572 SPINK13Q1W4C9 94 aa1.33□□□□□ -2.2
FOXN3-217ENST00000557572 SSBP3-AS1Q7Z2R9 100 aa1.33□□□□□ -2.2
FOXN3-217ENST00000557572 PRKDCP78527 4128 aaKnown RBP1.33□□□□□ -2.2
FOXN3-217ENST00000557572 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
FOXN3-217ENST00000557572 COX6B1P14854 86 aa1.32□□□□□ -2.2
FOXN3-217ENST00000557572 FXYD6Q9H0Q3 95 aa1.32□□□□□ -2.2
FOXN3-217ENST00000557572 ENHOQ6UWT2 76 aa1.31□□□□□ -2.2
FOXN3-217ENST00000557572 SMR3AQ99954 134 aa1.31□□□□□ -2.2
FOXN3-217ENST00000557572 ABCA13Q86UQ4 5058 aa1.31□□□□□ -2.2
FOXN3-217ENST00000557572 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
FOXN3-217ENST00000557572 PIN1P1O15428 100 aa1.3□□□□□ -2.2
FOXN3-217ENST00000557572 COX7BP24311 80 aa1.3□□□□□ -2.2
FOXN3-217ENST00000557572 Q9Y3F1 56 aa1.3□□□□□ -2.2
FOXN3-217ENST00000557572 K7EIL1 84 aa1.29□□□□□ -2.2
FOXN3-217ENST00000557572 K7EMI3 77 aa1.29□□□□□ -2.2
FOXN3-217ENST00000557572 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
FOXN3-217ENST00000557572 CSMD3Q7Z407 3707 aa1.29□□□□□ -2.2
FOXN3-217ENST00000557572 RNF213Q63HN8 5207 aa1.28□□□□□ -2.2
FOXN3-217ENST00000557572 HECTD4Q9Y4D8 3996 aa1.28□□□□□ -2.2
FOXN3-217ENST00000557572 NDUFA4O00483 81 aa1.28□□□□□ -2.2
FOXN3-217ENST00000557572 LYSTQ99698 3801 aa1.28□□□□□ -2.21
FOXN3-217ENST00000557572 SNRPGP15A8MWD9 76 aa1.27□□□□□ -2.21
FOXN3-217ENST00000557572 UBE2DNLQ8IWF7 75 aa1.27□□□□□ -2.21
FOXN3-217ENST00000557572 CRIPTQ9P021 101 aa1.27□□□□□ -2.21
FOXN3-217ENST00000557572 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
FOXN3-217ENST00000557572 A0A0D9SFI3 127 aa1.26□□□□□ -2.21
FOXN3-217ENST00000557572 LYNX1P0DP58 116 aa1.26□□□□□ -2.21
FOXN3-217ENST00000557572 CMYA5Q8N3K9 4069 aa1.25□□□□□ -2.21
FOXN3-217ENST00000557572 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
FOXN3-217ENST00000557572 NCBP2-AS2Q69YL0 99 aa1.25□□□□□ -2.21
FOXN3-217ENST00000557572 CPSF4LA6NMK7 179 aaKnown RBP1.24□□□□□ -2.21
FOXN3-217ENST00000557572 I3L2K1 104 aa1.24□□□□□ -2.21
FOXN3-217ENST00000557572 FCER1GP30273 86 aa1.24□□□□□ -2.21
FOXN3-217ENST00000557572 UBL5Q9BZL1 73 aa1.24□□□□□ -2.21
FOXN3-217ENST00000557572 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
FOXN3-217ENST00000557572 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
FOXN3-217ENST00000557572 DEFB119Q8N690 84 aa1.23□□□□□ -2.21
FOXN3-217ENST00000557572 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
FOXN3-217ENST00000557572 ROS1P08922 2347 aa1.23□□□□□ -2.21
FOXN3-217ENST00000557572 PLCE1Q9P212 2302 aa1.23□□□□□ -2.21
FOXN3-217ENST00000557572 FAT4Q6V0I7 4981 aa1.23□□□□□ -2.21
FOXN3-217ENST00000557572 KMT2AQ03164 3969 aa1.21□□□□□ -2.22
FOXN3-217ENST00000557572 TNCP24821 2201 aa1.21□□□□□ -2.22
FOXN3-217ENST00000557572 SORL1Q92673 2214 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 HRNRQ86YZ3 2850 aaPredicted RBP1.2□□□□□ -2.22
FOXN3-217ENST00000557572 SPTY2D1-AS1A0A0U1RR47 76 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 ANGP03950 147 aaKnown RBP1.2□□□□□ -2.22
FOXN3-217ENST00000557572 CD52P31358 61 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 DEFB109BQ30KR1 87 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 KCNQ1DNQ9H478 68 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
FOXN3-217ENST00000557572 M0R1W7 72 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 ARL14EPLP0DKL9 152 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 WNK2Q9Y3S1 2297 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 NEBP20929 6669 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 DNAH1Q9P2D7 4330 aa1.19□□□□□ -2.22
FOXN3-217ENST00000557572 USF3Q68DE3 2245 aa1.18□□□□□ -2.22
FOXN3-217ENST00000557572 K7EQZ3 153 aa1.18□□□□□ -2.22
FOXN3-217ENST00000557572 PKHD1P08F94 4074 aa1.18□□□□□ -2.22
FOXN3-217ENST00000557572 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
FOXN3-217ENST00000557572 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
FOXN3-217ENST00000557572 IGIPA6NJ69 53 aa1.17□□□□□ -2.22
FOXN3-217ENST00000557572 RPL38P63173 70 aaKnown RBP1.17□□□□□ -2.22
FOXN3-217ENST00000557572 DNAH7Q8WXX0 4024 aa1.17□□□□□ -2.22
FOXN3-217ENST00000557572 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
FOXN3-217ENST00000557572 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
FOXN3-217ENST00000557572 FXYD6P3P58550 94 aa1.16□□□□□ -2.22
FOXN3-217ENST00000557572 DEFB114Q30KQ6 69 aa1.16□□□□□ -2.22
FOXN3-217ENST00000557572 I3L3M4 83 aa1.15□□□□□ -2.23
FOXN3-217ENST00000557572 CRIP1P50238 77 aa1.15□□□□□ -2.23
FOXN3-217ENST00000557572 Q6ZSA8 131 aa1.15□□□□□ -2.23
FOXN3-217ENST00000557572 ANK3Q12955 4377 aaKnown RBP1.15□□□□□ -2.23
FOXN3-217ENST00000557572 A0A0D9SG42 100 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 PRH1P02810 166 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 COX6A2Q02221 97 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 LELP1Q5T871 98 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
FOXN3-217ENST00000557572 CNFNQ9BYD5 112 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 NMES1Q9C002 83 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 CMC2Q9NRP2 79 aa1.14□□□□□ -2.23
FOXN3-217ENST00000557572 DEFB131BA0A096LNP1 70 aa1.13□□□□□ -2.23
FOXN3-217ENST00000557572 KRTAP10-4P60372 401 aaPredicted RBP1.13□□□□□ -2.23
FOXN3-217ENST00000557572 PIGYQ3MUY2 71 aa1.13□□□□□ -2.23
FOXN3-217ENST00000557572 SPINK9Q5DT21 86 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms