RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
ARHGEF40-208ENST00000557498 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
ARHGEF40-208ENST00000557498 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
ARHGEF40-208ENST00000557498 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
ARHGEF40-208ENST00000557498 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
ARHGEF40-208ENST00000557498 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
ARHGEF40-208ENST00000557498 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
ARHGEF40-208ENST00000557498 C8orf17Q9NRJ1 99 aa8.12□□□□□ -1.11
ARHGEF40-208ENST00000557498 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
ARHGEF40-208ENST00000557498 J3QL48 77 aa8.1□□□□□ -1.11
ARHGEF40-208ENST00000557498 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
ARHGEF40-208ENST00000557498 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
ARHGEF40-208ENST00000557498 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
ARHGEF40-208ENST00000557498 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
ARHGEF40-208ENST00000557498 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
ARHGEF40-208ENST00000557498 LINC00313P59037 77 aa8.05□□□□□ -1.12
ARHGEF40-208ENST00000557498 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
ARHGEF40-208ENST00000557498 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
ARHGEF40-208ENST00000557498 ATOX1O00244 68 aa8.03□□□□□ -1.12
ARHGEF40-208ENST00000557498 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.12
ARHGEF40-208ENST00000557498 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
ARHGEF40-208ENST00000557498 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
ARHGEF40-208ENST00000557498 DMBT1Q9UGM3 2413 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF40-208ENST00000557498 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
ARHGEF40-208ENST00000557498 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
ARHGEF40-208ENST00000557498 PRR4Q16378 134 aa7.97□□□□□ -1.13
ARHGEF40-208ENST00000557498 SMIM20Q8N5G0 67 aa7.96□□□□□ -1.14
ARHGEF40-208ENST00000557498 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
ARHGEF40-208ENST00000557498 ANAPC13Q9BS18 74 aa7.95□□□□□ -1.14
ARHGEF40-208ENST00000557498 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
ARHGEF40-208ENST00000557498 NDUFS5O43920 106 aa7.94□□□□□ -1.14
ARHGEF40-208ENST00000557498 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
ARHGEF40-208ENST00000557498 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
ARHGEF40-208ENST00000557498 SERP2Q8N6R1 65 aa7.92□□□□□ -1.14
ARHGEF40-208ENST00000557498 TP53AIP1Q9HCN2 124 aa7.91□□□□□ -1.14
ARHGEF40-208ENST00000557498 UQCRQO14949 82 aa7.9□□□□□ -1.14
ARHGEF40-208ENST00000557498 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
ARHGEF40-208ENST00000557498 A8MUU9 505 aa7.87□□□□□ -1.15
ARHGEF40-208ENST00000557498 COX7CP15954 63 aa7.87□□□□□ -1.15
ARHGEF40-208ENST00000557498 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
ARHGEF40-208ENST00000557498 XP32Q5T750 250 aa7.84□□□□□ -1.15
ARHGEF40-208ENST00000557498 Q75L30 129 aa7.84□□□□□ -1.15
ARHGEF40-208ENST00000557498 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
ARHGEF40-208ENST00000557498 PCP4P48539 62 aa7.83□□□□□ -1.16
ARHGEF40-208ENST00000557498 C5orf47Q569G3 176 aa7.82□□□□□ -1.16
ARHGEF40-208ENST00000557498 H0Y9P7 68 aa7.81□□□□□ -1.16
ARHGEF40-208ENST00000557498 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
ARHGEF40-208ENST00000557498 MP68P56378 58 aa7.79□□□□□ -1.16
ARHGEF40-208ENST00000557498 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
ARHGEF40-208ENST00000557498 Q5W150 140 aa7.79□□□□□ -1.16
ARHGEF40-208ENST00000557498 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
ARHGEF40-208ENST00000557498 CCDC179H3BU77 68 aa7.78□□□□□ -1.16
ARHGEF40-208ENST00000557498 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
ARHGEF40-208ENST00000557498 A0A0U1RQV1 116 aa7.76□□□□□ -1.17
ARHGEF40-208ENST00000557498 H3BPC8 53 aa7.76□□□□□ -1.17
ARHGEF40-208ENST00000557498 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
ARHGEF40-208ENST00000557498 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
ARHGEF40-208ENST00000557498 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
ARHGEF40-208ENST00000557498 C1orf64Q8NEQ6 169 aa7.72□□□□□ -1.17
ARHGEF40-208ENST00000557498 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.18
ARHGEF40-208ENST00000557498 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
ARHGEF40-208ENST00000557498 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
ARHGEF40-208ENST00000557498 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
ARHGEF40-208ENST00000557498 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
ARHGEF40-208ENST00000557498 PCOTHQ58A44 107 aa7.64□□□□□ -1.19
ARHGEF40-208ENST00000557498 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
ARHGEF40-208ENST00000557498 C7orf65Q6ZTY9 151 aa7.63□□□□□ -1.19
ARHGEF40-208ENST00000557498 LPAP08519 4548 aa7.63□□□□□ -1.19
ARHGEF40-208ENST00000557498 NDUFC1O43677 76 aa7.62□□□□□ -1.19
ARHGEF40-208ENST00000557498 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
ARHGEF40-208ENST00000557498 H7BZZ5 65 aa7.6□□□□□ -1.19
ARHGEF40-208ENST00000557498 SPINK7P58062 85 aa7.58□□□□□ -1.2
ARHGEF40-208ENST00000557498 MUC17Q685J3 4493 aa7.53□□□□□ -1.2
ARHGEF40-208ENST00000557498 HRES1P13985 223 aa7.52□□□□□ -1.21
ARHGEF40-208ENST00000557498 TMEM258P61165 79 aa7.52□□□□□ -1.21
ARHGEF40-208ENST00000557498 LRP2P98164 4655 aa7.51□□□□□ -1.21
ARHGEF40-208ENST00000557498 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
ARHGEF40-208ENST00000557498 HMCN2Q8NDA2 5059 aa7.5□□□□□ -1.21
ARHGEF40-208ENST00000557498 HERC1Q15751 4861 aa7.49□□□□□ -1.21
ARHGEF40-208ENST00000557498 FAM236DA0A1B0GTK5 79 aa7.47□□□□□ -1.21
ARHGEF40-208ENST00000557498 FAM236CP0DP71 79 aa7.47□□□□□ -1.21
ARHGEF40-208ENST00000557498 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
ARHGEF40-208ENST00000557498 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
ARHGEF40-208ENST00000557498 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
ARHGEF40-208ENST00000557498 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
ARHGEF40-208ENST00000557498 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
ARHGEF40-208ENST00000557498 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
ARHGEF40-208ENST00000557498 A8MUN3 132 aa7.36□□□□□ -1.23
ARHGEF40-208ENST00000557498 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
ARHGEF40-208ENST00000557498 RBM12B-AS1Q9P1G2 102 aa7.34□□□□□ -1.23
ARHGEF40-208ENST00000557498 ACYP2P14621 99 aa7.32□□□□□ -1.24
ARHGEF40-208ENST00000557498 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
ARHGEF40-208ENST00000557498 COA5Q86WW8 74 aa7.27□□□□□ -1.25
ARHGEF40-208ENST00000557498 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
ARHGEF40-208ENST00000557498 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
ARHGEF40-208ENST00000557498 CHKB-CPT1BH3BT56 60 aa7.21□□□□□ -1.26
ARHGEF40-208ENST00000557498 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
ARHGEF40-208ENST00000557498 S4R3F8 94 aa7.17□□□□□ -1.26
ARHGEF40-208ENST00000557498 LCA10Q71F78 164 aa7.13□□□□□ -1.27
ARHGEF40-208ENST00000557498 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms