RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 CDK2AP2O75956 126 aa11.34□□□□□ -0.59
FOXN3-214ENST00000557258 TRAV22A0A0B4J277 110 aa11.33□□□□□ -0.59
FOXN3-214ENST00000557258 A0A1B0GVX0 72 aa11.32□□□□□ -0.6
FOXN3-214ENST00000557258 C1orf64Q8NEQ6 169 aa11.32□□□□□ -0.6
FOXN3-214ENST00000557258 SACSQ9NZJ4 4579 aa11.3□□□□□ -0.6
FOXN3-214ENST00000557258 BRK1Q8WUW1 75 aa11.28□□□□□ -0.6
FOXN3-214ENST00000557258 PCOTHQ58A44 107 aa11.28□□□□□ -0.6
FOXN3-214ENST00000557258 Q6ZSA8 131 aa11.27□□□□□ -0.6
FOXN3-214ENST00000557258 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
FOXN3-214ENST00000557258 ASB16-AS1Q495Z4 193 aa11.22□□□□□ -0.61
FOXN3-214ENST00000557258 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.62
FOXN3-214ENST00000557258 SSBP3-AS1Q7Z2R9 100 aa11.16□□□□□ -0.62
FOXN3-214ENST00000557258 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
FOXN3-214ENST00000557258 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
FOXN3-214ENST00000557258 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
FOXN3-214ENST00000557258 CD164Q04900 197 aa11.14□□□□□ -0.63
FOXN3-214ENST00000557258 FAT1Q14517 4588 aa11.14□□□□□ -0.63
FOXN3-214ENST00000557258 Q5W150 140 aa11.13□□□□□ -0.63
FOXN3-214ENST00000557258 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
FOXN3-214ENST00000557258 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
FOXN3-214ENST00000557258 H3BPC8 53 aa11.12□□□□□ -0.63
FOXN3-214ENST00000557258 DYNC1H1Q14204 4646 aaKnown RBP11.11□□□□□ -0.63
FOXN3-214ENST00000557258 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
FOXN3-214ENST00000557258 KMT2CQ8NEZ4 4911 aaKnown RBP11.1□□□□□ -0.63
FOXN3-214ENST00000557258 C1orf195Q5TG92 126 aa11.09□□□□□ -0.63
FOXN3-214ENST00000557258 PSPHP1O15172 72 aa11.07□□□□□ -0.64
FOXN3-214ENST00000557258 KRTAP21-3Q3LHN1 58 aa11.07□□□□□ -0.64
FOXN3-214ENST00000557258 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
FOXN3-214ENST00000557258 LINC00313P59037 77 aa11.02□□□□□ -0.64
FOXN3-214ENST00000557258 TYMSOSQ8TAI1 123 aa11.02□□□□□ -0.65
FOXN3-214ENST00000557258 PRR26Q8N8Z3 221 aa11.01□□□□□ -0.65
FOXN3-214ENST00000557258 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
FOXN3-214ENST00000557258 COA5Q86WW8 74 aa10.98□□□□□ -0.65
FOXN3-214ENST00000557258 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
FOXN3-214ENST00000557258 V9GYY9 64 aa10.97□□□□□ -0.65
FOXN3-214ENST00000557258 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
FOXN3-214ENST00000557258 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
FOXN3-214ENST00000557258 KRTAP13-3Q3SY46 172 aa10.94□□□□□ -0.66
FOXN3-214ENST00000557258 RYR2Q92736 4967 aa10.94□□□□□ -0.66
FOXN3-214ENST00000557258 A8MUN3 132 aa10.93□□□□□ -0.66
FOXN3-214ENST00000557258 Q1T7F1 81 aa10.93□□□□□ -0.66
FOXN3-214ENST00000557258 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
FOXN3-214ENST00000557258 LIMD2Q9BT23 127 aa10.9□□□□□ -0.67
FOXN3-214ENST00000557258 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
FOXN3-214ENST00000557258 HRES1P13985 223 aa10.87□□□□□ -0.67
FOXN3-214ENST00000557258 KRTAP16-1A8MUX0 517 aa10.86□□□□□ -0.67
FOXN3-214ENST00000557258 SEC61GP60059 68 aa10.85□□□□□ -0.67
FOXN3-214ENST00000557258 A0A1B0GVY2 172 aa10.85□□□□□ -0.67
FOXN3-214ENST00000557258 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
FOXN3-214ENST00000557258 LINC00304Q8N9R0 145 aa10.83□□□□□ -0.68
FOXN3-214ENST00000557258 SPINK1P00995 79 aa10.82□□□□□ -0.68
FOXN3-214ENST00000557258 PRR15LQ9BU68 103 aa10.82□□□□□ -0.68
FOXN3-214ENST00000557258 IGKV2D-30A0A075B6S6 120 aa10.81□□□□□ -0.68
FOXN3-214ENST00000557258 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
FOXN3-214ENST00000557258 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
FOXN3-214ENST00000557258 A8MU10 97 aa10.8□□□□□ -0.68
FOXN3-214ENST00000557258 PMAIP1Q13794 54 aa10.79□□□□□ -0.68
FOXN3-214ENST00000557258 Q5VV11 94 aa10.78□□□□□ -0.68
FOXN3-214ENST00000557258 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
FOXN3-214ENST00000557258 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
FOXN3-214ENST00000557258 KRTAP10-4P60372 401 aaPredicted RBP10.74□□□□□ -0.69
FOXN3-214ENST00000557258 CHKB-CPT1BH3BT56 60 aa10.73□□□□□ -0.69
FOXN3-214ENST00000557258 RYR3Q15413 4870 aa10.72□□□□□ -0.69
FOXN3-214ENST00000557258 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
FOXN3-214ENST00000557258 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
FOXN3-214ENST00000557258 ACYP2P14621 99 aa10.63□□□□□ -0.71
FOXN3-214ENST00000557258 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
FOXN3-214ENST00000557258 A6NED7 52 aa10.59□□□□□ -0.71
FOXN3-214ENST00000557258 HSPG2P98160 4391 aa10.58□□□□□ -0.72
FOXN3-214ENST00000557258 Q8N1X5 172 aa10.57□□□□□ -0.72
FOXN3-214ENST00000557258 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
FOXN3-214ENST00000557258 LINC01558Q9Y6Z2 57 aa10.56□□□□□ -0.72
FOXN3-214ENST00000557258 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
FOXN3-214ENST00000557258 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
FOXN3-214ENST00000557258 RPS29P62273 56 aaKnown RBP10.53□□□□□ -0.72
FOXN3-214ENST00000557258 Q75L30 129 aa10.53□□□□□ -0.72
FOXN3-214ENST00000557258 MYCBP2O75592 4640 aa10.53□□□□□ -0.72
FOXN3-214ENST00000557258 SPINK7P58062 85 aa10.51□□□□□ -0.73
FOXN3-214ENST00000557258 LCA10Q71F78 164 aa10.51□□□□□ -0.73
FOXN3-214ENST00000557258 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
FOXN3-214ENST00000557258 TNXBP22105 4242 aa10.48□□□□□ -0.73
FOXN3-214ENST00000557258 KRTAP17-1Q9BYP8 105 aa10.46□□□□□ -0.73
FOXN3-214ENST00000557258 Q5VSD8 79 aa10.46□□□□□ -0.74
FOXN3-214ENST00000557258 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
FOXN3-214ENST00000557258 FAT3Q8TDW7 4589 aa10.42□□□□□ -0.74
FOXN3-214ENST00000557258 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
FOXN3-214ENST00000557258 RYR1P21817 5038 aa10.4□□□□□ -0.74
FOXN3-214ENST00000557258 A8MUU9 505 aa10.39□□□□□ -0.75
FOXN3-214ENST00000557258 C20orf166-AS1Q96NR2 134 aa10.39□□□□□ -0.75
FOXN3-214ENST00000557258 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
FOXN3-214ENST00000557258 A0A1B0GU69 56 aa10.35□□□□□ -0.75
FOXN3-214ENST00000557258 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
FOXN3-214ENST00000557258 A6NN06 94 aa10.34□□□□□ -0.75
FOXN3-214ENST00000557258 RBM12B-AS1Q9P1G2 102 aa10.34□□□□□ -0.75
FOXN3-214ENST00000557258 KRTAP10-8P60410 259 aa10.27□□□□□ -0.77
FOXN3-214ENST00000557258 KRTAP3-1Q9BYR8 98 aa10.27□□□□□ -0.77
FOXN3-214ENST00000557258 LPAP08519 4548 aa10.16□□□□□ -0.78
FOXN3-214ENST00000557258 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
FOXN3-214ENST00000557258 XP32Q5T750 250 aa10.09□□□□□ -0.79
FOXN3-214ENST00000557258 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms