RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
SLIRP-207ENST00000556831 RBM3P98179 157 aaKnown RBP7.94□□□□□ -1.14
SLIRP-207ENST00000556831 DSCR8Q96T75 97 aa7.92□□□□□ -1.14
SLIRP-207ENST00000556831 UQCRQO14949 82 aa7.91□□□□□ -1.14
SLIRP-207ENST00000556831 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
SLIRP-207ENST00000556831 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
SLIRP-207ENST00000556831 HIST1H4AP62805 103 aaKnown RBP7.88□□□□□ -1.15
SLIRP-207ENST00000556831 A0A0G2JQZ4 141 aa7.87□□□□□ -1.15
SLIRP-207ENST00000556831 Q5XG85 94 aa7.87□□□□□ -1.15
SLIRP-207ENST00000556831 IGLV8-61A0A075B6I0 122 aa7.86□□□□□ -1.15
SLIRP-207ENST00000556831 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
SLIRP-207ENST00000556831 Q6ZQT0 140 aa7.85□□□□□ -1.15
SLIRP-207ENST00000556831 SMIM20Q8N5G0 67 aa7.85□□□□□ -1.15
SLIRP-207ENST00000556831 A0A1B0GW54 56 aa7.84□□□□□ -1.15
SLIRP-207ENST00000556831 COX7CP15954 63 aa7.84□□□□□ -1.15
SLIRP-207ENST00000556831 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
SLIRP-207ENST00000556831 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
SLIRP-207ENST00000556831 CXCL6P80162 114 aa7.82□□□□□ -1.16
SLIRP-207ENST00000556831 IGKV3D-7A0A0C4DH55 119 aa7.81□□□□□ -1.16
SLIRP-207ENST00000556831 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
SLIRP-207ENST00000556831 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SLIRP-207ENST00000556831 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
SLIRP-207ENST00000556831 SS18L2Q9UHA2 77 aa7.8□□□□□ -1.16
SLIRP-207ENST00000556831 TRBV7-4A0A0J9YYF1 115 aa7.79□□□□□ -1.16
SLIRP-207ENST00000556831 XP32Q5T750 250 aa7.78□□□□□ -1.16
SLIRP-207ENST00000556831 LCE2BO14633 110 aa7.77□□□□□ -1.17
SLIRP-207ENST00000556831 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
SLIRP-207ENST00000556831 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
SLIRP-207ENST00000556831 Q6ZVQ6 151 aa7.74□□□□□ -1.17
SLIRP-207ENST00000556831 TMEM258P61165 79 aa7.73□□□□□ -1.17
SLIRP-207ENST00000556831 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
SLIRP-207ENST00000556831 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
SLIRP-207ENST00000556831 A0A087WSZ3 146 aa7.7□□□□□ -1.18
SLIRP-207ENST00000556831 NREPQ16612 68 aa7.68□□□□□ -1.18
SLIRP-207ENST00000556831 A0A087WVE0 104 aa7.67□□□□□ -1.18
SLIRP-207ENST00000556831 J3KT08 172 aa7.65□□□□□ -1.18
SLIRP-207ENST00000556831 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
SLIRP-207ENST00000556831 PCOTHQ58A44 107 aa7.65□□□□□ -1.18
SLIRP-207ENST00000556831 NDUFC1O43677 76 aa7.64□□□□□ -1.19
SLIRP-207ENST00000556831 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
SLIRP-207ENST00000556831 BPY2O14599 106 aa7.62□□□□□ -1.19
SLIRP-207ENST00000556831 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
SLIRP-207ENST00000556831 ATP5EP56381 51 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-207ENST00000556831 Q96NJ1 140 aa7.58□□□□□ -1.2
SLIRP-207ENST00000556831 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
SLIRP-207ENST00000556831 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
SLIRP-207ENST00000556831 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
SLIRP-207ENST00000556831 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
SLIRP-207ENST00000556831 Q75L30 129 aa7.54□□□□□ -1.2
SLIRP-207ENST00000556831 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
SLIRP-207ENST00000556831 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
SLIRP-207ENST00000556831 DSCR10P59022 87 aa7.51□□□□□ -1.21
SLIRP-207ENST00000556831 DEFB116Q30KQ4 102 aa7.51□□□□□ -1.21
SLIRP-207ENST00000556831 LINC00313P59037 77 aa7.5□□□□□ -1.21
SLIRP-207ENST00000556831 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
SLIRP-207ENST00000556831 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
SLIRP-207ENST00000556831 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
SLIRP-207ENST00000556831 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
SLIRP-207ENST00000556831 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
SLIRP-207ENST00000556831 TMEM254Q8TBM7 123 aa7.46□□□□□ -1.22
SLIRP-207ENST00000556831 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
SLIRP-207ENST00000556831 H7BZZ5 65 aa7.45□□□□□ -1.22
SLIRP-207ENST00000556831 COX6B2Q6YFQ2 88 aa7.45□□□□□ -1.22
SLIRP-207ENST00000556831 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
SLIRP-207ENST00000556831 A8MUU9 505 aa7.44□□□□□ -1.22
SLIRP-207ENST00000556831 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
SLIRP-207ENST00000556831 NDUFB1O75438 58 aa7.44□□□□□ -1.22
SLIRP-207ENST00000556831 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
SLIRP-207ENST00000556831 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
SLIRP-207ENST00000556831 HCG22E2RYF7 251 aa7.4□□□□□ -1.22
SLIRP-207ENST00000556831 C5orf47Q569G3 176 aa7.4□□□□□ -1.22
SLIRP-207ENST00000556831 CYSTM1Q9H1C7 97 aa7.4□□□□□ -1.22
SLIRP-207ENST00000556831 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
SLIRP-207ENST00000556831 Q8N9L7 120 aa7.38□□□□□ -1.23
SLIRP-207ENST00000556831 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
SLIRP-207ENST00000556831 H3BPC8 53 aa7.37□□□□□ -1.23
SLIRP-207ENST00000556831 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
SLIRP-207ENST00000556831 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
SLIRP-207ENST00000556831 A8MWP4 228 aa7.35□□□□□ -1.23
SLIRP-207ENST00000556831 MP68P56378 58 aa7.35□□□□□ -1.23
SLIRP-207ENST00000556831 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
SLIRP-207ENST00000556831 K7EQZ3 153 aa7.34□□□□□ -1.23
SLIRP-207ENST00000556831 M0R2T5 61 aa7.33□□□□□ -1.24
SLIRP-207ENST00000556831 MT1HP80294 61 aa7.33□□□□□ -1.24
SLIRP-207ENST00000556831 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-207ENST00000556831 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
SLIRP-207ENST00000556831 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
SLIRP-207ENST00000556831 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SLIRP-207ENST00000556831 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
SLIRP-207ENST00000556831 hDV103S1A0JD37 113 aa7.26□□□□□ -1.25
SLIRP-207ENST00000556831 ZCCHC13Q8WW36 166 aaKnown RBP7.25□□□□□ -1.25
SLIRP-207ENST00000556831 TP53AIP1Q9HCN2 124 aa7.25□□□□□ -1.25
SLIRP-207ENST00000556831 RBM12B-AS1Q9P1G2 102 aa7.25□□□□□ -1.25
SLIRP-207ENST00000556831 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-207ENST00000556831 WFDC13Q8IUB5 93 aa7.22□□□□□ -1.25
SLIRP-207ENST00000556831 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-207ENST00000556831 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
SLIRP-207ENST00000556831 NDUFS5O43920 106 aa7.21□□□□□ -1.26
SLIRP-207ENST00000556831 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
SLIRP-207ENST00000556831 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms