RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 ATRQ13535 2644 aa5.22□□□□□ -1.57
MARK3-210ENST00000556463 IGLV5-52A0A0A0MRZ9 124 aa5.22□□□□□ -1.57
MARK3-210ENST00000556463 ACYP2P14621 99 aa5.22□□□□□ -1.57
MARK3-210ENST00000556463 RTL8CO15255 209 aa5.21□□□□□ -1.57
MARK3-210ENST00000556463 TENM2Q9NT68 2774 aa5.21□□□□□ -1.58
MARK3-210ENST00000556463 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
MARK3-210ENST00000556463 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
MARK3-210ENST00000556463 DNAH9Q9NYC9 4486 aa5.2□□□□□ -1.58
MARK3-210ENST00000556463 Q96NJ1 140 aa5.2□□□□□ -1.58
MARK3-210ENST00000556463 NSD1Q96L73 2696 aaPredicted RBP5.18□□□□□ -1.58
MARK3-210ENST00000556463 HUWE1Q7Z6Z7 4374 aaKnown RBP5.17□□□□□ -1.58
MARK3-210ENST00000556463 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
MARK3-210ENST00000556463 ALMS1Q8TCU4 4167 aa5.17□□□□□ -1.58
MARK3-210ENST00000556463 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
MARK3-210ENST00000556463 ROMO1P60602 79 aa5.16□□□□□ -1.58
MARK3-210ENST00000556463 TP53AIP1Q9HCN2 124 aa5.16□□□□□ -1.58
MARK3-210ENST00000556463 KMT2BQ9UMN6 2715 aaPredicted RBP5.16□□□□□ -1.58
MARK3-210ENST00000556463 CSMD3Q7Z407 3707 aa5.15□□□□□ -1.58
MARK3-210ENST00000556463 HECTD1Q9ULT8 2610 aa5.15□□□□□ -1.59
MARK3-210ENST00000556463 C8orf17Q9NRJ1 99 aa5.15□□□□□ -1.59
MARK3-210ENST00000556463 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
MARK3-210ENST00000556463 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
MARK3-210ENST00000556463 NBEAL1Q6ZS30 2694 aa5.13□□□□□ -1.59
MARK3-210ENST00000556463 CHTF8P0CG12 524 aa5.13□□□□□ -1.59
MARK3-210ENST00000556463 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
MARK3-210ENST00000556463 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
MARK3-210ENST00000556463 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
MARK3-210ENST00000556463 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
MARK3-210ENST00000556463 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
MARK3-210ENST00000556463 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
MARK3-210ENST00000556463 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
MARK3-210ENST00000556463 DNAH7Q8WXX0 4024 aa5.09□□□□□ -1.59
MARK3-210ENST00000556463 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
MARK3-210ENST00000556463 A0A087X002 238 aa5.08□□□□□ -1.6
MARK3-210ENST00000556463 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
MARK3-210ENST00000556463 FLNBO75369 2602 aaKnown RBP5.07□□□□□ -1.6
MARK3-210ENST00000556463 STAB1Q9NY15 2570 aa5.07□□□□□ -1.6
MARK3-210ENST00000556463 A0A1B0GVX0 72 aa5.06□□□□□ -1.6
MARK3-210ENST00000556463 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 MAST4O15021 2626 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 J3QKU1 62 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 K7ERS5 55 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 ZNF861PO60384 105 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 Q5W150 140 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
MARK3-210ENST00000556463 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
MARK3-210ENST00000556463 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
MARK3-210ENST00000556463 C14orf177Q52M58 125 aa5.04□□□□□ -1.6
MARK3-210ENST00000556463 PANO1I0J062 215 aa5.03□□□□□ -1.6
MARK3-210ENST00000556463 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
MARK3-210ENST00000556463 A8MUU9 505 aa5.03□□□□□ -1.6
MARK3-210ENST00000556463 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
MARK3-210ENST00000556463 COL7A1Q02388 2944 aa5.02□□□□□ -1.61
MARK3-210ENST00000556463 MGAM2Q2M2H8 2515 aa5.01□□□□□ -1.61
MARK3-210ENST00000556463 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
MARK3-210ENST00000556463 Q8N1X5 172 aa5.01□□□□□ -1.61
MARK3-210ENST00000556463 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
MARK3-210ENST00000556463 SPACA4Q8TDM5 124 aa5□□□□□ -1.61
MARK3-210ENST00000556463 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
MARK3-210ENST00000556463 UBE2DNLQ8IWF7 75 aa4.98□□□□□ -1.61
MARK3-210ENST00000556463 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
MARK3-210ENST00000556463 P0C880 135 aa4.98□□□□□ -1.61
MARK3-210ENST00000556463 PLECQ15149 4684 aaKnown RBP4.97□□□□□ -1.61
MARK3-210ENST00000556463 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
MARK3-210ENST00000556463 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
MARK3-210ENST00000556463 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
MARK3-210ENST00000556463 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
MARK3-210ENST00000556463 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
MARK3-210ENST00000556463 PRKDCP78527 4128 aaKnown RBP4.93□□□□□ -1.62
MARK3-210ENST00000556463 A0A0D9SG42 100 aa4.93□□□□□ -1.62
MARK3-210ENST00000556463 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
MARK3-210ENST00000556463 PSORS1C2Q9UIG4 136 aa4.9□□□□□ -1.62
MARK3-210ENST00000556463 NBDYA0A0U1RRE5 68 aa4.9□□□□□ -1.62
MARK3-210ENST00000556463 A0A1B0GU33 70 aa4.89□□□□□ -1.63
MARK3-210ENST00000556463 DNAH2Q9P225 4427 aa4.89□□□□□ -1.63
MARK3-210ENST00000556463 TGP01266 2768 aa4.89□□□□□ -1.63
MARK3-210ENST00000556463 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
MARK3-210ENST00000556463 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
MARK3-210ENST00000556463 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
MARK3-210ENST00000556463 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
MARK3-210ENST00000556463 STARD9Q9P2P6 4700 aa4.86□□□□□ -1.63
MARK3-210ENST00000556463 KMT2AQ03164 3969 aa4.84□□□□□ -1.63
MARK3-210ENST00000556463 A0A087WTM6 91 aa4.84□□□□□ -1.63
MARK3-210ENST00000556463 DNAH6Q9C0G6 4158 aa4.84□□□□□ -1.63
MARK3-210ENST00000556463 H0YAA0 97 aa4.83□□□□□ -1.64
MARK3-210ENST00000556463 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
MARK3-210ENST00000556463 Q6ZSA8 131 aa4.82□□□□□ -1.64
MARK3-210ENST00000556463 LY6G6CO95867 125 aa4.81□□□□□ -1.64
MARK3-210ENST00000556463 TYMSOSQ8TAI1 123 aa4.81□□□□□ -1.64
MARK3-210ENST00000556463 NUPR2A6NF83 97 aa4.81□□□□□ -1.64
MARK3-210ENST00000556463 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
MARK3-210ENST00000556463 KRTAP21-3Q3LHN1 58 aa4.77□□□□□ -1.65
MARK3-210ENST00000556463 KRTAP13-2Q52LG2 175 aa4.76□□□□□ -1.65
MARK3-210ENST00000556463 MEGF8Q7Z7M0 2845 aa4.75□□□□□ -1.65
MARK3-210ENST00000556463 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
MARK3-210ENST00000556463 PKD1P98161 4303 aa4.71□□□□□ -1.66
MARK3-210ENST00000556463 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
MARK3-210ENST00000556463 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
MARK3-210ENST00000556463 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
MARK3-210ENST00000556463 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms