RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 IGLV7-46A0A075B6I9 117 aa5.18□□□□□ -1.58
ACTN1-218ENST00000556343 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
ACTN1-218ENST00000556343 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
ACTN1-218ENST00000556343 DSCR10P59022 87 aa5.18□□□□□ -1.58
ACTN1-218ENST00000556343 HIST1H4AP62805 103 aaKnown RBP5.18□□□□□ -1.58
ACTN1-218ENST00000556343 LINC00313P59037 77 aa5.17□□□□□ -1.58
ACTN1-218ENST00000556343 IMUPQ9GZP8 106 aa5.17□□□□□ -1.58
ACTN1-218ENST00000556343 K7EQZ3 153 aa5.16□□□□□ -1.58
ACTN1-218ENST00000556343 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
ACTN1-218ENST00000556343 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
ACTN1-218ENST00000556343 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
ACTN1-218ENST00000556343 Q8N9L7 120 aa5.13□□□□□ -1.59
ACTN1-218ENST00000556343 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
ACTN1-218ENST00000556343 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
ACTN1-218ENST00000556343 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
ACTN1-218ENST00000556343 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
ACTN1-218ENST00000556343 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
ACTN1-218ENST00000556343 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
ACTN1-218ENST00000556343 WFDC13Q8IUB5 93 aa5.1□□□□□ -1.59
ACTN1-218ENST00000556343 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
ACTN1-218ENST00000556343 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
ACTN1-218ENST00000556343 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
ACTN1-218ENST00000556343 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
ACTN1-218ENST00000556343 A0A087WVE0 104 aa5.07□□□□□ -1.6
ACTN1-218ENST00000556343 NDUFS5O43920 106 aa5.06□□□□□ -1.6
ACTN1-218ENST00000556343 PCP4P48539 62 aa5.06□□□□□ -1.6
ACTN1-218ENST00000556343 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
ACTN1-218ENST00000556343 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
ACTN1-218ENST00000556343 SMIM20Q8N5G0 67 aa5.04□□□□□ -1.6
ACTN1-218ENST00000556343 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
ACTN1-218ENST00000556343 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
ACTN1-218ENST00000556343 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
ACTN1-218ENST00000556343 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
ACTN1-218ENST00000556343 Q75L30 129 aa5.03□□□□□ -1.6
ACTN1-218ENST00000556343 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
ACTN1-218ENST00000556343 HERC1Q15751 4861 aa5.02□□□□□ -1.61
ACTN1-218ENST00000556343 A8MUU9 505 aa5.02□□□□□ -1.61
ACTN1-218ENST00000556343 XP32Q5T750 250 aa5.02□□□□□ -1.61
ACTN1-218ENST00000556343 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
ACTN1-218ENST00000556343 ATOX1O00244 68 aa5.01□□□□□ -1.61
ACTN1-218ENST00000556343 UQCRQO14949 82 aa5□□□□□ -1.61
ACTN1-218ENST00000556343 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
ACTN1-218ENST00000556343 SEC61BP60468 96 aaKnown RBP4.99□□□□□ -1.61
ACTN1-218ENST00000556343 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
ACTN1-218ENST00000556343 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
ACTN1-218ENST00000556343 MP68P56378 58 aa4.96□□□□□ -1.62
ACTN1-218ENST00000556343 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
ACTN1-218ENST00000556343 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
ACTN1-218ENST00000556343 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
ACTN1-218ENST00000556343 TRAV22A0A0B4J277 110 aa4.93□□□□□ -1.62
ACTN1-218ENST00000556343 H3BPC8 53 aa4.93□□□□□ -1.62
ACTN1-218ENST00000556343 SERP2Q8N6R1 65 aa4.93□□□□□ -1.62
ACTN1-218ENST00000556343 LPAP08519 4548 aa4.92□□□□□ -1.62
ACTN1-218ENST00000556343 H0Y9P7 68 aa4.92□□□□□ -1.62
ACTN1-218ENST00000556343 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
ACTN1-218ENST00000556343 ANAPC13Q9BS18 74 aa4.92□□□□□ -1.62
ACTN1-218ENST00000556343 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.63
ACTN1-218ENST00000556343 LRP2P98164 4655 aa4.9□□□□□ -1.63
ACTN1-218ENST00000556343 Q5W150 140 aa4.89□□□□□ -1.63
ACTN1-218ENST00000556343 COX7CP15954 63 aa4.88□□□□□ -1.63
ACTN1-218ENST00000556343 C7orf65Q6ZTY9 151 aa4.88□□□□□ -1.63
ACTN1-218ENST00000556343 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
ACTN1-218ENST00000556343 LINC00208Q96KT6 92 aa4.87□□□□□ -1.63
ACTN1-218ENST00000556343 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
ACTN1-218ENST00000556343 IGKV2D-30A0A075B6S6 120 aa4.86□□□□□ -1.63
ACTN1-218ENST00000556343 IGKV2-30P06310 120 aa4.86□□□□□ -1.63
ACTN1-218ENST00000556343 SPINK7P58062 85 aa4.85□□□□□ -1.63
ACTN1-218ENST00000556343 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
ACTN1-218ENST00000556343 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
ACTN1-218ENST00000556343 A0A0U1RQV1 116 aa4.81□□□□□ -1.64
ACTN1-218ENST00000556343 NDUFC1O43677 76 aa4.8□□□□□ -1.64
ACTN1-218ENST00000556343 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
ACTN1-218ENST00000556343 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
ACTN1-218ENST00000556343 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
ACTN1-218ENST00000556343 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
ACTN1-218ENST00000556343 FAM236DA0A1B0GTK5 79 aa4.74□□□□□ -1.65
ACTN1-218ENST00000556343 FAM236CP0DP71 79 aa4.74□□□□□ -1.65
ACTN1-218ENST00000556343 HRES1P13985 223 aa4.74□□□□□ -1.65
ACTN1-218ENST00000556343 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
ACTN1-218ENST00000556343 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
ACTN1-218ENST00000556343 A8MUN3 132 aa4.71□□□□□ -1.66
ACTN1-218ENST00000556343 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
ACTN1-218ENST00000556343 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
ACTN1-218ENST00000556343 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
ACTN1-218ENST00000556343 H7BZZ5 65 aa4.67□□□□□ -1.66
ACTN1-218ENST00000556343 ACYP2P14621 99 aa4.67□□□□□ -1.66
ACTN1-218ENST00000556343 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
ACTN1-218ENST00000556343 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
ACTN1-218ENST00000556343 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
ACTN1-218ENST00000556343 TMEM258P61165 79 aa4.65□□□□□ -1.67
ACTN1-218ENST00000556343 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
ACTN1-218ENST00000556343 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
ACTN1-218ENST00000556343 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
ACTN1-218ENST00000556343 MUC2Q02817 5179 aa4.61□□□□□ -1.67
ACTN1-218ENST00000556343 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
ACTN1-218ENST00000556343 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
ACTN1-218ENST00000556343 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
ACTN1-218ENST00000556343 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
ACTN1-218ENST00000556343 S4R3F8 94 aa4.59□□□□□ -1.67
ACTN1-218ENST00000556343 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms