RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 A8MUN3 132 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 TGP01266 2768 aa4.12□□□□□ -1.75
LINC-ROR-201ENST00000553704 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
LINC-ROR-201ENST00000553704 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
LINC-ROR-201ENST00000553704 A8MU10 97 aa4.11□□□□□ -1.75
LINC-ROR-201ENST00000553704 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
LINC-ROR-201ENST00000553704 Q6ZR54 194 aa4.11□□□□□ -1.75
LINC-ROR-201ENST00000553704 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
LINC-ROR-201ENST00000553704 ZNF861PO60384 105 aa4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 Q5VV11 94 aa4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 NDUFS5O43920 106 aa4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 COA5Q86WW8 74 aa4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
LINC-ROR-201ENST00000553704 IGLV7-46A0A075B6I9 117 aa4.09□□□□□ -1.75
LINC-ROR-201ENST00000553704 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
LINC-ROR-201ENST00000553704 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
LINC-ROR-201ENST00000553704 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
LINC-ROR-201ENST00000553704 TP53AIP1Q9HCN2 124 aa4.08□□□□□ -1.76
LINC-ROR-201ENST00000553704 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
LINC-ROR-201ENST00000553704 FAM229AH3BQW9 127 aa4.07□□□□□ -1.76
LINC-ROR-201ENST00000553704 CDK2AP2O75956 126 aa4.07□□□□□ -1.76
LINC-ROR-201ENST00000553704 IGLV7-43P04211 117 aa4.07□□□□□ -1.76
LINC-ROR-201ENST00000553704 Q5W150 140 aa4.06□□□□□ -1.76
LINC-ROR-201ENST00000553704 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
LINC-ROR-201ENST00000553704 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
LINC-ROR-201ENST00000553704 PKD1P98161 4303 aa4.05□□□□□ -1.76
LINC-ROR-201ENST00000553704 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
LINC-ROR-201ENST00000553704 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 KRTAP10-2P60368 255 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 C1orf134Q5TEV5 83 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 HRES1P13985 223 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 LIMD2Q9BT23 127 aa4.04□□□□□ -1.76
LINC-ROR-201ENST00000553704 LY6G6CO95867 125 aa4.03□□□□□ -1.76
LINC-ROR-201ENST00000553704 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
LINC-ROR-201ENST00000553704 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
LINC-ROR-201ENST00000553704 SPAG11AQ6PDA7 123 aa4.02□□□□□ -1.77
LINC-ROR-201ENST00000553704 Q75L30 129 aa4.02□□□□□ -1.77
LINC-ROR-201ENST00000553704 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
LINC-ROR-201ENST00000553704 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
LINC-ROR-201ENST00000553704 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
LINC-ROR-201ENST00000553704 LCA10Q71F78 164 aa4.01□□□□□ -1.77
LINC-ROR-201ENST00000553704 RETNLBQ9BQ08 111 aa3.99□□□□□ -1.77
LINC-ROR-201ENST00000553704 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
LINC-ROR-201ENST00000553704 LINC01558Q9Y6Z2 57 aa3.99□□□□□ -1.77
LINC-ROR-201ENST00000553704 A6NED7 52 aa3.98□□□□□ -1.77
LINC-ROR-201ENST00000553704 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
LINC-ROR-201ENST00000553704 SSBP3-AS1Q7Z2R9 100 aa3.97□□□□□ -1.77
LINC-ROR-201ENST00000553704 SPINK7P58062 85 aa3.96□□□□□ -1.77
LINC-ROR-201ENST00000553704 KRTAP21-3Q3LHN1 58 aa3.96□□□□□ -1.77
LINC-ROR-201ENST00000553704 Q6ZSA8 131 aa3.96□□□□□ -1.78
LINC-ROR-201ENST00000553704 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.78
LINC-ROR-201ENST00000553704 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
LINC-ROR-201ENST00000553704 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
LINC-ROR-201ENST00000553704 LINC00313P59037 77 aa3.95□□□□□ -1.78
LINC-ROR-201ENST00000553704 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
LINC-ROR-201ENST00000553704 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
LINC-ROR-201ENST00000553704 DMAC1Q96GE9 116 aa3.93□□□□□ -1.78
LINC-ROR-201ENST00000553704 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
LINC-ROR-201ENST00000553704 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
LINC-ROR-201ENST00000553704 A6NN06 94 aa3.91□□□□□ -1.78
LINC-ROR-201ENST00000553704 ACYP2P14621 99 aa3.91□□□□□ -1.78
LINC-ROR-201ENST00000553704 ATP11AUNQ6ZP68 121 aa3.91□□□□□ -1.78
LINC-ROR-201ENST00000553704 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
LINC-ROR-201ENST00000553704 IGKV2D-30A0A075B6S6 120 aa3.89□□□□□ -1.79
LINC-ROR-201ENST00000553704 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
LINC-ROR-201ENST00000553704 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
LINC-ROR-201ENST00000553704 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
LINC-ROR-201ENST00000553704 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
LINC-ROR-201ENST00000553704 A0A1B0GU69 56 aa3.84□□□□□ -1.8
LINC-ROR-201ENST00000553704 C7orf65Q6ZTY9 151 aa3.84□□□□□ -1.8
LINC-ROR-201ENST00000553704 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
LINC-ROR-201ENST00000553704 FAT1Q14517 4588 aa3.83□□□□□ -1.8
LINC-ROR-201ENST00000553704 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
LINC-ROR-201ENST00000553704 SPINK1P00995 79 aa3.83□□□□□ -1.8
LINC-ROR-201ENST00000553704 Q8N1X5 172 aa3.82□□□□□ -1.8
LINC-ROR-201ENST00000553704 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
LINC-ROR-201ENST00000553704 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
LINC-ROR-201ENST00000553704 SMR3BP02814 79 aaPredicted RBP3.81□□□□□ -1.8
LINC-ROR-201ENST00000553704 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
LINC-ROR-201ENST00000553704 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
LINC-ROR-201ENST00000553704 KRTAP3-2Q9BYR7 98 aa3.79□□□□□ -1.8
LINC-ROR-201ENST00000553704 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
LINC-ROR-201ENST00000553704 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
LINC-ROR-201ENST00000553704 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
LINC-ROR-201ENST00000553704 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
LINC-ROR-201ENST00000553704 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
LINC-ROR-201ENST00000553704 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
LINC-ROR-201ENST00000553704 RYR2Q92736 4967 aa3.76□□□□□ -1.81
LINC-ROR-201ENST00000553704 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
LINC-ROR-201ENST00000553704 UQCR11O14957 56 aa3.75□□□□□ -1.81
LINC-ROR-201ENST00000553704 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
LINC-ROR-201ENST00000553704 A8MUU9 505 aa3.74□□□□□ -1.81
LINC-ROR-201ENST00000553704 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
LINC-ROR-201ENST00000553704 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
LINC-ROR-201ENST00000553704 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
LINC-ROR-201ENST00000553704 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms