RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 HECTD4Q9Y4D8 3996 aa2.53□□□□□ -2
RDH11-204ENST00000553578 ATRQ13535 2644 aa2.53□□□□□ -2.01
RDH11-204ENST00000553578 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
RDH11-204ENST00000553578 HECTD1Q9ULT8 2610 aa2.52□□□□□ -2.01
RDH11-204ENST00000553578 GVQW2A0A096LPI5 108 aaPredicted RBP2.51□□□□□ -2.01
RDH11-204ENST00000553578 LINC00959A0A1B0GUT2 108 aa2.51□□□□□ -2.01
RDH11-204ENST00000553578 A0A1B0GU69 56 aa2.51□□□□□ -2.01
RDH11-204ENST00000553578 NBEAL1Q6ZS30 2694 aa2.51□□□□□ -2.01
RDH11-204ENST00000553578 DNAH9Q9NYC9 4486 aa2.51□□□□□ -2.01
RDH11-204ENST00000553578 FASNP49327 2511 aaKnown RBP2.5□□□□□ -2.01
RDH11-204ENST00000553578 KRTAP26-1Q6PEX3 210 aa2.5□□□□□ -2.01
RDH11-204ENST00000553578 CNBPP62633 177 aaKnown RBP2.5□□□□□ -2.01
RDH11-204ENST00000553578 DNAH10OSP0CZ25 163 aa2.5□□□□□ -2.01
RDH11-204ENST00000553578 KRTAP10-11P60412 298 aa2.5□□□□□ -2.01
RDH11-204ENST00000553578 KRTAP21-3Q3LHN1 58 aa2.5□□□□□ -2.01
RDH11-204ENST00000553578 ITPR2Q14571 2701 aa2.49□□□□□ -2.01
RDH11-204ENST00000553578 ANGP03950 147 aaKnown RBP2.49□□□□□ -2.01
RDH11-204ENST00000553578 COX17Q14061 63 aa2.49□□□□□ -2.01
RDH11-204ENST00000553578 UQCR11O14957 56 aa2.49□□□□□ -2.01
RDH11-204ENST00000553578 P0C880 135 aa2.49□□□□□ -2.01
RDH11-204ENST00000553578 VWFP04275 2813 aa2.49□□□□□ -2.01
RDH11-204ENST00000553578 DSCR10P59022 87 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 Q8NDZ9 215 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 PRO0255Q9UI72 69 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 A8MUU9 505 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 C1orf137Q5JT78 98 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 Q8IZM0 81 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 C20orf166-AS1Q96NR2 134 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 SMR3AQ99954 134 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
RDH11-204ENST00000553578 FLNBO75369 2602 aaKnown RBP2.47□□□□□ -2.01
RDH11-204ENST00000553578 A0A087WSZ3 146 aa2.47□□□□□ -2.01
RDH11-204ENST00000553578 VPS13DQ5THJ4 4388 aa2.47□□□□□ -2.01
RDH11-204ENST00000553578 LELP1Q5T871 98 aa2.47□□□□□ -2.01
RDH11-204ENST00000553578 SSBP3-AS1Q7Z2R9 100 aa2.47□□□□□ -2.01
RDH11-204ENST00000553578 COL6A5A8TX70 2615 aa2.46□□□□□ -2.01
RDH11-204ENST00000553578 KRTAP29-1A8MX34 341 aaPredicted RBP2.46□□□□□ -2.01
RDH11-204ENST00000553578 HRES1P13985 223 aa2.46□□□□□ -2.01
RDH11-204ENST00000553578 KRTAP24-1Q3LI83 254 aa2.46□□□□□ -2.01
RDH11-204ENST00000553578 C9orf163Q8N9P6 203 aa2.46□□□□□ -2.01
RDH11-204ENST00000553578 CRIPTQ9P021 101 aa2.46□□□□□ -2.01
RDH11-204ENST00000553578 NSD1Q96L73 2696 aaPredicted RBP2.46□□□□□ -2.02
RDH11-204ENST00000553578 HELZ2Q9BYK8 2649 aaKnown RBP2.46□□□□□ -2.02
RDH11-204ENST00000553578 SPATA8Q6RVD6 105 aa2.46□□□□□ -2.02
RDH11-204ENST00000553578 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
RDH11-204ENST00000553578 UBE2DNLQ8IWF7 75 aa2.46□□□□□ -2.02
RDH11-204ENST00000553578 PKD1L1Q8TDX9 2849 aa2.46□□□□□ -2.02
RDH11-204ENST00000553578 DNAH17Q9UFH2 4485 aa2.46□□□□□ -2.02
RDH11-204ENST00000553578 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
RDH11-204ENST00000553578 DEFB135Q30KP9 77 aa2.45□□□□□ -2.02
RDH11-204ENST00000553578 MAST4O15021 2626 aa2.45□□□□□ -2.02
RDH11-204ENST00000553578 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
RDH11-204ENST00000553578 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
RDH11-204ENST00000553578 DNAH10Q8IVF4 4471 aa2.45□□□□□ -2.02
RDH11-204ENST00000553578 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 SPART-AS1P0CW21 52 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 LINC01556Q5JQF7 62 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 MGAM2Q2M2H8 2515 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 DNHD1Q96M86 4753 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 DNAH2Q9P225 4427 aa2.44□□□□□ -2.02
RDH11-204ENST00000553578 TENM1Q9UKZ4 2725 aa2.43□□□□□ -2.02
RDH11-204ENST00000553578 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
RDH11-204ENST00000553578 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
RDH11-204ENST00000553578 DMAC1Q96GE9 116 aa2.43□□□□□ -2.02
RDH11-204ENST00000553578 R4GN34 69 aa2.43□□□□□ -2.02
RDH11-204ENST00000553578 C6orf48Q9UBA6 75 aa2.42□□□□□ -2.02
RDH11-204ENST00000553578 STAB1Q9NY15 2570 aa2.42□□□□□ -2.02
RDH11-204ENST00000553578 SPRR4Q96PI1 79 aa2.42□□□□□ -2.02
RDH11-204ENST00000553578 ACYP2P14621 99 aa2.41□□□□□ -2.02
RDH11-204ENST00000553578 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
RDH11-204ENST00000553578 A0A1W2PNN7 141 aa2.41□□□□□ -2.02
RDH11-204ENST00000553578 IGLV5-48A0A075B6I7 105 aa2.4□□□□□ -2.03
RDH11-204ENST00000553578 A0A096LNI7 61 aa2.4□□□□□ -2.03
RDH11-204ENST00000553578 DEFB131BA0A096LNP1 70 aa2.4□□□□□ -2.03
RDH11-204ENST00000553578 SPRR1AP35321 89 aa2.4□□□□□ -2.03
RDH11-204ENST00000553578 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
RDH11-204ENST00000553578 K7EIL1 84 aa2.39□□□□□ -2.03
RDH11-204ENST00000553578 C15orf56Q8N910 161 aa2.39□□□□□ -2.03
RDH11-204ENST00000553578 SRRM2Q9UQ35 2752 aaKnown RBP2.39□□□□□ -2.03
RDH11-204ENST00000553578 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
RDH11-204ENST00000553578 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
RDH11-204ENST00000553578 TENM3Q9P273 2699 aa2.38□□□□□ -2.03
RDH11-204ENST00000553578 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
RDH11-204ENST00000553578 TP53AIP1Q9HCN2 124 aa2.38□□□□□ -2.03
RDH11-204ENST00000553578 PKD1P98161 4303 aa2.38□□□□□ -2.03
RDH11-204ENST00000553578 LINC00472Q9H8W2 130 aa2.37□□□□□ -2.03
RDH11-204ENST00000553578 KRTAP11-1Q8IUC1 163 aa2.37□□□□□ -2.03
RDH11-204ENST00000553578 STARD9Q9P2P6 4700 aa2.37□□□□□ -2.03
RDH11-204ENST00000553578 Q6ZRN7 208 aaPredicted RBP2.37□□□□□ -2.03
RDH11-204ENST00000553578 APLNQ9ULZ1 77 aa2.37□□□□□ -2.03
RDH11-204ENST00000553578 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
RDH11-204ENST00000553578 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
RDH11-204ENST00000553578 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
RDH11-204ENST00000553578 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 KRTAP1-5Q9BYS1 174 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 Q5W150 140 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 KRTAP7-1Q8IUC3 87 aa2.35□□□□□ -2.03
RDH11-204ENST00000553578 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms