RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
PSEN1-206ENST00000553447 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
PSEN1-206ENST00000553447 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
PSEN1-206ENST00000553447 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-206ENST00000553447 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
PSEN1-206ENST00000553447 HCG22E2RYF7 251 aa9.9□□□□□ -0.82
PSEN1-206ENST00000553447 MMP24-AS1A0A0U1RRL7 71 aa9.88□□□□□ -0.83
PSEN1-206ENST00000553447 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
PSEN1-206ENST00000553447 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
PSEN1-206ENST00000553447 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
PSEN1-206ENST00000553447 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
PSEN1-206ENST00000553447 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
PSEN1-206ENST00000553447 CASC2Q6XLA1 102 aa9.85□□□□□ -0.83
PSEN1-206ENST00000553447 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
PSEN1-206ENST00000553447 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
PSEN1-206ENST00000553447 ATOX1O00244 68 aa9.83□□□□□ -0.84
PSEN1-206ENST00000553447 hDV103S1A0JD37 113 aa9.82□□□□□ -0.84
PSEN1-206ENST00000553447 LINC00313P59037 77 aa9.8□□□□□ -0.84
PSEN1-206ENST00000553447 TMEM254Q8TBM7 123 aa9.78□□□□□ -0.84
PSEN1-206ENST00000553447 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
PSEN1-206ENST00000553447 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
PSEN1-206ENST00000553447 DMBT1Q9UGM3 2413 aaPredicted RBP9.78□□□□□ -0.84
PSEN1-206ENST00000553447 J3QL48 77 aa9.77□□□□□ -0.85
PSEN1-206ENST00000553447 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-206ENST00000553447 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
PSEN1-206ENST00000553447 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
PSEN1-206ENST00000553447 SMIM20Q8N5G0 67 aa9.74□□□□□ -0.85
PSEN1-206ENST00000553447 KRTAP16-1A8MUX0 517 aa9.73□□□□□ -0.85
PSEN1-206ENST00000553447 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
PSEN1-206ENST00000553447 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.86
PSEN1-206ENST00000553447 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
PSEN1-206ENST00000553447 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
PSEN1-206ENST00000553447 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
PSEN1-206ENST00000553447 NDUFS5O43920 106 aa9.67□□□□□ -0.86
PSEN1-206ENST00000553447 PCP4P48539 62 aa9.67□□□□□ -0.86
PSEN1-206ENST00000553447 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-206ENST00000553447 PRR4Q16378 134 aa9.65□□□□□ -0.86
PSEN1-206ENST00000553447 COX7CP15954 63 aa9.64□□□□□ -0.87
PSEN1-206ENST00000553447 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
PSEN1-206ENST00000553447 UQCRQO14949 82 aa9.63□□□□□ -0.87
PSEN1-206ENST00000553447 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
PSEN1-206ENST00000553447 A8MUU9 505 aa9.57□□□□□ -0.88
PSEN1-206ENST00000553447 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
PSEN1-206ENST00000553447 CCDC179H3BU77 68 aa9.56□□□□□ -0.88
PSEN1-206ENST00000553447 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
PSEN1-206ENST00000553447 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
PSEN1-206ENST00000553447 H0Y9P7 68 aa9.53□□□□□ -0.88
PSEN1-206ENST00000553447 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
PSEN1-206ENST00000553447 MP68P56378 58 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 XP32Q5T750 250 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 Q5W150 140 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 Q75L30 129 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
PSEN1-206ENST00000553447 A0A0U1RQV1 116 aa9.48□□□□□ -0.89
PSEN1-206ENST00000553447 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
PSEN1-206ENST00000553447 H3BPC8 53 aa9.46□□□□□ -0.9
PSEN1-206ENST00000553447 SNURFQ9Y675 71 aa9.46□□□□□ -0.9
PSEN1-206ENST00000553447 RPL37P61927 97 aaKnown RBP9.45□□□□□ -0.9
PSEN1-206ENST00000553447 KLKP1Q107X0 134 aa9.45□□□□□ -0.9
PSEN1-206ENST00000553447 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
PSEN1-206ENST00000553447 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
PSEN1-206ENST00000553447 CYSTM1Q9H1C7 97 aa9.41□□□□□ -0.9
PSEN1-206ENST00000553447 LOC101927531A0A1B0GV80 90 aa9.38□□□□□ -0.91
PSEN1-206ENST00000553447 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
PSEN1-206ENST00000553447 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
PSEN1-206ENST00000553447 LPAP08519 4548 aa9.33□□□□□ -0.92
PSEN1-206ENST00000553447 NDUFC1O43677 76 aa9.33□□□□□ -0.92
PSEN1-206ENST00000553447 CYP4F30PQ9H0H9 118 aa9.32□□□□□ -0.92
PSEN1-206ENST00000553447 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
PSEN1-206ENST00000553447 H7BZZ5 65 aa9.3□□□□□ -0.92
PSEN1-206ENST00000553447 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
PSEN1-206ENST00000553447 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
PSEN1-206ENST00000553447 LRP2P98164 4655 aa9.23□□□□□ -0.93
PSEN1-206ENST00000553447 SPINK7P58062 85 aa9.23□□□□□ -0.93
PSEN1-206ENST00000553447 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
PSEN1-206ENST00000553447 HERC1Q15751 4861 aa9.21□□□□□ -0.93
PSEN1-206ENST00000553447 TMEM258P61165 79 aa9.21□□□□□ -0.94
PSEN1-206ENST00000553447 HRES1P13985 223 aa9.17□□□□□ -0.94
PSEN1-206ENST00000553447 HMCN2Q8NDA2 5059 aa9.17□□□□□ -0.94
PSEN1-206ENST00000553447 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
PSEN1-206ENST00000553447 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
PSEN1-206ENST00000553447 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
PSEN1-206ENST00000553447 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
PSEN1-206ENST00000553447 ATP5EP56381 51 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-206ENST00000553447 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
PSEN1-206ENST00000553447 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
PSEN1-206ENST00000553447 DMAC1Q96GE9 116 aa9.01□□□□□ -0.97
PSEN1-206ENST00000553447 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
PSEN1-206ENST00000553447 MPLKIPQ8TAP9 179 aa8.96□□□□□ -0.98
PSEN1-206ENST00000553447 A8MUN3 132 aa8.95□□□□□ -0.98
PSEN1-206ENST00000553447 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
PSEN1-206ENST00000553447 ACYP2P14621 99 aa8.94□□□□□ -0.98
PSEN1-206ENST00000553447 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
PSEN1-206ENST00000553447 SERP1Q9Y6X1 66 aa8.92□□□□□ -0.98
PSEN1-206ENST00000553447 COA5Q86WW8 74 aa8.89□□□□□ -0.99
PSEN1-206ENST00000553447 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
PSEN1-206ENST00000553447 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
PSEN1-206ENST00000553447 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
PSEN1-206ENST00000553447 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 2047.2 ms