RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 A0A1B0GVX0 72 aa11.27□□□□□ -0.6
SSH1-209ENST00000551165 C1orf195Q5TG92 126 aa11.27□□□□□ -0.6
SSH1-209ENST00000551165 CASC2Q6XLA1 102 aa11.27□□□□□ -0.6
SSH1-209ENST00000551165 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
SSH1-209ENST00000551165 Q5XG85 94 aa11.26□□□□□ -0.61
SSH1-209ENST00000551165 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
SSH1-209ENST00000551165 C20orf197Q8N268 126 aa11.25□□□□□ -0.61
SSH1-209ENST00000551165 LINC00304Q8N9R0 145 aa11.24□□□□□ -0.61
SSH1-209ENST00000551165 C8orf17Q9NRJ1 99 aa11.24□□□□□ -0.61
SSH1-209ENST00000551165 SPINK1P00995 79 aa11.22□□□□□ -0.61
SSH1-209ENST00000551165 hDV103S1A0JD37 113 aa11.21□□□□□ -0.62
SSH1-209ENST00000551165 LIMD2Q9BT23 127 aa11.2□□□□□ -0.62
SSH1-209ENST00000551165 SNURFQ9Y675 71 aa11.19□□□□□ -0.62
SSH1-209ENST00000551165 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
SSH1-209ENST00000551165 TNXBP22105 4242 aa11.13□□□□□ -0.63
SSH1-209ENST00000551165 FLG2Q5D862 2391 aaPredicted RBP11.12□□□□□ -0.63
SSH1-209ENST00000551165 SPAG11AQ6PDA7 123 aa11.12□□□□□ -0.63
SSH1-209ENST00000551165 KLKP1Q107X0 134 aa11.1□□□□□ -0.63
SSH1-209ENST00000551165 Q8N1X5 172 aa11.09□□□□□ -0.63
SSH1-209ENST00000551165 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
SSH1-209ENST00000551165 MRPL34Q9BQ48 92 aaKnown RBP11.08□□□□□ -0.64
SSH1-209ENST00000551165 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
SSH1-209ENST00000551165 A0A0U1RQV1 116 aa11.08□□□□□ -0.64
SSH1-209ENST00000551165 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
SSH1-209ENST00000551165 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
SSH1-209ENST00000551165 NDUFS5O43920 106 aa11.05□□□□□ -0.64
SSH1-209ENST00000551165 LINC00313P59037 77 aa11.05□□□□□ -0.64
SSH1-209ENST00000551165 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
SSH1-209ENST00000551165 C8orf87E5RJ46 101 aa11.03□□□□□ -0.64
SSH1-209ENST00000551165 H7BZZ5 65 aa11.03□□□□□ -0.64
SSH1-209ENST00000551165 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
SSH1-209ENST00000551165 KRTAP16-1A8MUX0 517 aa10.99□□□□□ -0.65
SSH1-209ENST00000551165 H0Y9P7 68 aa10.99□□□□□ -0.65
SSH1-209ENST00000551165 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
SSH1-209ENST00000551165 SEC61GP60059 68 aa10.97□□□□□ -0.65
SSH1-209ENST00000551165 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
SSH1-209ENST00000551165 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
SSH1-209ENST00000551165 Q5W150 140 aa10.95□□□□□ -0.66
SSH1-209ENST00000551165 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
SSH1-209ENST00000551165 MP68P56378 58 aa10.94□□□□□ -0.66
SSH1-209ENST00000551165 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
SSH1-209ENST00000551165 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
SSH1-209ENST00000551165 TMEM258P61165 79 aa10.92□□□□□ -0.66
SSH1-209ENST00000551165 Q8N9P0 234 aaPredicted RBP10.91□□□□□ -0.66
SSH1-209ENST00000551165 C1orf64Q8NEQ6 169 aa10.89□□□□□ -0.67
SSH1-209ENST00000551165 C9orf92A6NGG3 77 aa10.89□□□□□ -0.67
SSH1-209ENST00000551165 NDUFC1O43677 76 aa10.88□□□□□ -0.67
SSH1-209ENST00000551165 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
SSH1-209ENST00000551165 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
SSH1-209ENST00000551165 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
SSH1-209ENST00000551165 H3BPC8 53 aa10.82□□□□□ -0.68
SSH1-209ENST00000551165 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
SSH1-209ENST00000551165 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
SSH1-209ENST00000551165 BIRC6Q9NR09 4857 aa10.79□□□□□ -0.68
SSH1-209ENST00000551165 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
SSH1-209ENST00000551165 PRR4Q16378 134 aa10.76□□□□□ -0.69
SSH1-209ENST00000551165 V9GYY9 64 aa10.74□□□□□ -0.69
SSH1-209ENST00000551165 PRO0628Q9UI54 55 aa10.72□□□□□ -0.69
SSH1-209ENST00000551165 HERC2O95714 4834 aa10.71□□□□□ -0.69
SSH1-209ENST00000551165 OXTP01178 125 aa10.7□□□□□ -0.7
SSH1-209ENST00000551165 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
SSH1-209ENST00000551165 C20orf166-AS1Q96NR2 134 aa10.68□□□□□ -0.7
SSH1-209ENST00000551165 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
SSH1-209ENST00000551165 A8MUU9 505 aa10.67□□□□□ -0.7
SSH1-209ENST00000551165 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
SSH1-209ENST00000551165 FP248Q71RG6 208 aaPredicted RBP10.65□□□□□ -0.71
SSH1-209ENST00000551165 IGKV2-30P06310 120 aa10.63□□□□□ -0.71
SSH1-209ENST00000551165 ATP5EP56381 51 aaPredicted RBP10.63□□□□□ -0.71
SSH1-209ENST00000551165 C4orf26Q17RF5 130 aa10.63□□□□□ -0.71
SSH1-209ENST00000551165 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
SSH1-209ENST00000551165 SPANXA2-OT1Q8N9U9 137 aa10.59□□□□□ -0.71
SSH1-209ENST00000551165 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
SSH1-209ENST00000551165 Q75L30 129 aa10.54□□□□□ -0.72
SSH1-209ENST00000551165 HRES1P13985 223 aa10.54□□□□□ -0.72
SSH1-209ENST00000551165 XP32Q5T750 250 aa10.53□□□□□ -0.72
SSH1-209ENST00000551165 LPAP08519 4548 aa10.49□□□□□ -0.73
SSH1-209ENST00000551165 J3QL48 77 aa10.47□□□□□ -0.73
SSH1-209ENST00000551165 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.74
SSH1-209ENST00000551165 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
SSH1-209ENST00000551165 PCLOQ9Y6V0 5065 aa10.42□□□□□ -0.74
SSH1-209ENST00000551165 LRP2P98164 4655 aa10.42□□□□□ -0.74
SSH1-209ENST00000551165 SPINK7P58062 85 aa10.4□□□□□ -0.74
SSH1-209ENST00000551165 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
SSH1-209ENST00000551165 TPRXLQ17RH7 258 aa10.38□□□□□ -0.75
SSH1-209ENST00000551165 COA5Q86WW8 74 aa10.38□□□□□ -0.75
SSH1-209ENST00000551165 DMAC1Q96GE9 116 aa10.34□□□□□ -0.75
SSH1-209ENST00000551165 SMIM26A0A096LP01 95 aa10.32□□□□□ -0.76
SSH1-209ENST00000551165 MPLKIPQ8TAP9 179 aa10.28□□□□□ -0.76
SSH1-209ENST00000551165 ACYP2P14621 99 aa10.27□□□□□ -0.77
SSH1-209ENST00000551165 KRTAP3-1Q9BYR8 98 aa10.24□□□□□ -0.77
SSH1-209ENST00000551165 HERC1Q15751 4861 aa10.22□□□□□ -0.77
SSH1-209ENST00000551165 PMAIP1Q13794 54 aa10.19□□□□□ -0.78
SSH1-209ENST00000551165 BRK1Q8WUW1 75 aa10.18□□□□□ -0.78
SSH1-209ENST00000551165 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
SSH1-209ENST00000551165 Q1T7F1 81 aa10.11□□□□□ -0.79
SSH1-209ENST00000551165 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
SSH1-209ENST00000551165 A8MUN3 132 aa10.1□□□□□ -0.79
SSH1-209ENST00000551165 PSPHP1O15172 72 aa10.04□□□□□ -0.8
SSH1-209ENST00000551165 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
SSH1-209ENST00000551165 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms