RNA–Protein interactions for RNA: ENST00000551043.5

CNOT2-227, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-227ENST00000551043 SPINK6Q6UWN8 80 aa11.23□□□□□ -0.61
CNOT2-227ENST00000551043 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
CNOT2-227ENST00000551043 HYDINQ4G0P3 5121 aa11.2□□□□□ -0.62
CNOT2-227ENST00000551043 SPANXA2-OT1Q8N9U9 137 aa11.19□□□□□ -0.62
CNOT2-227ENST00000551043 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
CNOT2-227ENST00000551043 KRTAP10-1P60331 282 aa11.16□□□□□ -0.62
CNOT2-227ENST00000551043 PCOTHQ58A44 107 aa11.16□□□□□ -0.62
CNOT2-227ENST00000551043 LRP1BQ9NZR2 4599 aa11.16□□□□□ -0.62
CNOT2-227ENST00000551043 PKD1P98161 4303 aa11.15□□□□□ -0.62
CNOT2-227ENST00000551043 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
CNOT2-227ENST00000551043 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
CNOT2-227ENST00000551043 Q1T7F1 81 aa11.11□□□□□ -0.63
CNOT2-227ENST00000551043 Q6ZSA8 131 aa11.11□□□□□ -0.63
CNOT2-227ENST00000551043 CD164Q04900 197 aa11.1□□□□□ -0.63
CNOT2-227ENST00000551043 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
CNOT2-227ENST00000551043 BRK1Q8WUW1 75 aa11.08□□□□□ -0.64
CNOT2-227ENST00000551043 KRTAP13-2Q52LG2 175 aa11.07□□□□□ -0.64
CNOT2-227ENST00000551043 PRO0628Q9UI54 55 aa11.07□□□□□ -0.64
CNOT2-227ENST00000551043 PSPHP1O15172 72 aa11.06□□□□□ -0.64
CNOT2-227ENST00000551043 Q5W150 140 aa11.03□□□□□ -0.64
CNOT2-227ENST00000551043 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.65
CNOT2-227ENST00000551043 COA5Q86WW8 74 aa11□□□□□ -0.65
CNOT2-227ENST00000551043 C1orf195Q5TG92 126 aa10.97□□□□□ -0.65
CNOT2-227ENST00000551043 A8MUN3 132 aa10.96□□□□□ -0.65
CNOT2-227ENST00000551043 KRTAP1-4P0C5Y4 121 aa10.96□□□□□ -0.65
CNOT2-227ENST00000551043 Q8N9P0 234 aaPredicted RBP10.96□□□□□ -0.65
CNOT2-227ENST00000551043 LINC00313P59037 77 aa10.95□□□□□ -0.66
CNOT2-227ENST00000551043 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
CNOT2-227ENST00000551043 C8orf87E5RJ46 101 aa10.94□□□□□ -0.66
CNOT2-227ENST00000551043 V9GYY9 64 aa10.93□□□□□ -0.66
CNOT2-227ENST00000551043 LOC101927531A0A1B0GV80 90 aa10.92□□□□□ -0.66
CNOT2-227ENST00000551043 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
CNOT2-227ENST00000551043 PLA2G1BP04054 148 aaKnown RBP10.89□□□□□ -0.67
CNOT2-227ENST00000551043 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
CNOT2-227ENST00000551043 HRES1P13985 223 aa10.86□□□□□ -0.67
CNOT2-227ENST00000551043 Q5VV11 94 aa10.86□□□□□ -0.67
CNOT2-227ENST00000551043 LIMD2Q9BT23 127 aa10.85□□□□□ -0.67
CNOT2-227ENST00000551043 PRR15LQ9BU68 103 aa10.84□□□□□ -0.67
CNOT2-227ENST00000551043 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
CNOT2-227ENST00000551043 SACSQ9NZJ4 4579 aa10.81□□□□□ -0.68
CNOT2-227ENST00000551043 C4orf48Q5BLP8 95 aa10.81□□□□□ -0.68
CNOT2-227ENST00000551043 SPAG11AQ6PDA7 123 aa10.81□□□□□ -0.68
CNOT2-227ENST00000551043 KRTAP16-1A8MUX0 517 aa10.79□□□□□ -0.68
CNOT2-227ENST00000551043 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
CNOT2-227ENST00000551043 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
CNOT2-227ENST00000551043 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
CNOT2-227ENST00000551043 A8MU10 97 aa10.74□□□□□ -0.69
CNOT2-227ENST00000551043 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
CNOT2-227ENST00000551043 SPINK1P00995 79 aa10.73□□□□□ -0.69
CNOT2-227ENST00000551043 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
CNOT2-227ENST00000551043 DYNC1H1Q14204 4646 aaKnown RBP10.7□□□□□ -0.7
CNOT2-227ENST00000551043 LINC01558Q9Y6Z2 57 aa10.69□□□□□ -0.7
CNOT2-227ENST00000551043 ACYP2P14621 99 aa10.68□□□□□ -0.7
CNOT2-227ENST00000551043 Q75L30 129 aa10.68□□□□□ -0.7
CNOT2-227ENST00000551043 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
CNOT2-227ENST00000551043 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
CNOT2-227ENST00000551043 DMAC1Q96GE9 116 aa10.65□□□□□ -0.7
CNOT2-227ENST00000551043 FAT1Q14517 4588 aa10.64□□□□□ -0.71
CNOT2-227ENST00000551043 A6NED7 52 aa10.63□□□□□ -0.71
CNOT2-227ENST00000551043 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
CNOT2-227ENST00000551043 LCA10Q71F78 164 aa10.59□□□□□ -0.71
CNOT2-227ENST00000551043 KMT2CQ8NEZ4 4911 aaKnown RBP10.55□□□□□ -0.72
CNOT2-227ENST00000551043 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
CNOT2-227ENST00000551043 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
CNOT2-227ENST00000551043 RYR2Q92736 4967 aa10.53□□□□□ -0.72
CNOT2-227ENST00000551043 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
CNOT2-227ENST00000551043 SPINK7P58062 85 aa10.52□□□□□ -0.73
CNOT2-227ENST00000551043 SPTSSBQ8NFR3 76 aa10.5□□□□□ -0.73
CNOT2-227ENST00000551043 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
CNOT2-227ENST00000551043 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
CNOT2-227ENST00000551043 PMAIP1Q13794 54 aa10.46□□□□□ -0.73
CNOT2-227ENST00000551043 CDC42SE1Q9NRR8 79 aa10.46□□□□□ -0.73
CNOT2-227ENST00000551043 PKHD1L1Q86WI1 4243 aa10.43□□□□□ -0.74
CNOT2-227ENST00000551043 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
CNOT2-227ENST00000551043 Q8N1X5 172 aa10.4□□□□□ -0.75
CNOT2-227ENST00000551043 A0A1B0GU69 56 aa10.37□□□□□ -0.75
CNOT2-227ENST00000551043 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
CNOT2-227ENST00000551043 A8MUU9 505 aa10.33□□□□□ -0.76
CNOT2-227ENST00000551043 RYR3Q15413 4870 aa10.3□□□□□ -0.76
CNOT2-227ENST00000551043 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
CNOT2-227ENST00000551043 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
CNOT2-227ENST00000551043 A6NN06 94 aa10.25□□□□□ -0.77
CNOT2-227ENST00000551043 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
CNOT2-227ENST00000551043 TNXBP22105 4242 aa10.16□□□□□ -0.78
CNOT2-227ENST00000551043 KTN1-AS1Q86SY8 53 aa10.15□□□□□ -0.78
CNOT2-227ENST00000551043 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.78
CNOT2-227ENST00000551043 UQCR11O14957 56 aa10.14□□□□□ -0.79
CNOT2-227ENST00000551043 HSPG2P98160 4391 aa10.14□□□□□ -0.79
CNOT2-227ENST00000551043 Q5VSD8 79 aa10.14□□□□□ -0.79
CNOT2-227ENST00000551043 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
CNOT2-227ENST00000551043 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
CNOT2-227ENST00000551043 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
CNOT2-227ENST00000551043 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
CNOT2-227ENST00000551043 SEC61GP60059 68 aa10.07□□□□□ -0.8
CNOT2-227ENST00000551043 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
CNOT2-227ENST00000551043 RYR1P21817 5038 aa10.01□□□□□ -0.81
CNOT2-227ENST00000551043 MYCBP2O75592 4640 aa10□□□□□ -0.81
CNOT2-227ENST00000551043 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
CNOT2-227ENST00000551043 EPPK1P58107 5090 aaKnown RBP9.94□□□□□ -0.82
CNOT2-227ENST00000551043 KIAA1109Q2LD37 5005 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 261.8 ms