RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 K7EP34 96 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 BAALC-AS2P0C853 105 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 CD164Q04900 197 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 MOBPQ13875 183 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 C9orf153Q5TBE3 101 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 PKHD1L1Q86WI1 4243 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 C9JAW5 83 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 SPINK1P00995 79 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 RPS29P62273 56 aaKnown RBP3.32□□□□□ -1.88
SCAF11-213ENST00000550629 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 ANKRD29Q8N6D5 301 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 LINC00304Q8N9R0 145 aa3.32□□□□□ -1.88
SCAF11-213ENST00000550629 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
SCAF11-213ENST00000550629 PDE6GP18545 87 aa3.3□□□□□ -1.88
SCAF11-213ENST00000550629 Q6Q795 121 aa3.3□□□□□ -1.88
SCAF11-213ENST00000550629 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
SCAF11-213ENST00000550629 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 TRBV7-4A0A0J9YYF1 115 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 F8W1H4 67 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 RBM3P98179 157 aaKnown RBP3.29□□□□□ -1.88
SCAF11-213ENST00000550629 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 Q5XG85 94 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 DSCR8Q96T75 97 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 LIMD2Q9BT23 127 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
SCAF11-213ENST00000550629 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
SCAF11-213ENST00000550629 A0A1B0GW54 56 aa3.28□□□□□ -1.88
SCAF11-213ENST00000550629 TEN1Q86WV5 123 aa3.28□□□□□ -1.88
SCAF11-213ENST00000550629 TRBV7-7A0A0K0K1E9 115 aa3.27□□□□□ -1.89
SCAF11-213ENST00000550629 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 CCKP06307 115 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
SCAF11-213ENST00000550629 A0A1B0GV90 55 aa3.25□□□□□ -1.89
SCAF11-213ENST00000550629 A0A1W2PNM2 257 aa3.25□□□□□ -1.89
SCAF11-213ENST00000550629 Q6ZQT0 140 aa3.25□□□□□ -1.89
SCAF11-213ENST00000550629 FP248Q71RG6 208 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-213ENST00000550629 C14orf132Q9NPU4 83 aa3.25□□□□□ -1.89
SCAF11-213ENST00000550629 A0A0G2JQZ4 141 aa3.24□□□□□ -1.89
SCAF11-213ENST00000550629 A0A1B0GV72 72 aa3.24□□□□□ -1.89
SCAF11-213ENST00000550629 KRTAP13-3Q3SY46 172 aa3.24□□□□□ -1.89
SCAF11-213ENST00000550629 HRCT1Q6UXD1 115 aa3.24□□□□□ -1.89
SCAF11-213ENST00000550629 TNXBP22105 4242 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 A0A087WSZ3 146 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 ETDBQ3ZM63 59 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 C1orf195Q5TG92 126 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 VPS25Q9BRG1 176 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 HERC1Q15751 4861 aa3.22□□□□□ -1.89
SCAF11-213ENST00000550629 FAM240AA0A1B0GVK7 77 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 A8MU10 97 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 J3KT08 172 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 ACYP1P07311 99 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 PRR4Q16378 134 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 LINC00472Q9H8W2 130 aa3.19□□□□□ -1.9
SCAF11-213ENST00000550629 NREPQ16612 68 aa3.18□□□□□ -1.9
SCAF11-213ENST00000550629 Q96NJ1 140 aa3.18□□□□□ -1.9
SCAF11-213ENST00000550629 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
SCAF11-213ENST00000550629 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
SCAF11-213ENST00000550629 J3QR89 54 aa3.16□□□□□ -1.9
SCAF11-213ENST00000550629 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
SCAF11-213ENST00000550629 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
SCAF11-213ENST00000550629 Q6ZVQ6 151 aa3.15□□□□□ -1.91
SCAF11-213ENST00000550629 SIGMAR1Q99720 223 aa3.15□□□□□ -1.91
SCAF11-213ENST00000550629 A8MWP4 228 aa3.14□□□□□ -1.91
SCAF11-213ENST00000550629 BPY2O14599 106 aa3.14□□□□□ -1.91
SCAF11-213ENST00000550629 NDUFB1O75438 58 aa3.14□□□□□ -1.91
SCAF11-213ENST00000550629 A0A1B0GVX0 72 aa3.13□□□□□ -1.91
SCAF11-213ENST00000550629 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
SCAF11-213ENST00000550629 CXCL6P80162 114 aa3.13□□□□□ -1.91
SCAF11-213ENST00000550629 DEFB116Q30KQ4 102 aa3.13□□□□□ -1.91
SCAF11-213ENST00000550629 K7ERU9 68 aa3.12□□□□□ -1.91
SCAF11-213ENST00000550629 ATP5EP2Q5VTU8 51 aa3.12□□□□□ -1.91
SCAF11-213ENST00000550629 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
SCAF11-213ENST00000550629 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
SCAF11-213ENST00000550629 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
SCAF11-213ENST00000550629 LINC00313P59037 77 aa3.11□□□□□ -1.91
SCAF11-213ENST00000550629 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
SCAF11-213ENST00000550629 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
SCAF11-213ENST00000550629 K7EQZ3 153 aa3.09□□□□□ -1.91
SCAF11-213ENST00000550629 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
SCAF11-213ENST00000550629 C8orf17Q9NRJ1 99 aa3.09□□□□□ -1.91
SCAF11-213ENST00000550629 A8MUU9 505 aa3.08□□□□□ -1.92
SCAF11-213ENST00000550629 MMP24-AS1A0A0U1RRL7 71 aa3.07□□□□□ -1.92
SCAF11-213ENST00000550629 RPL37P61927 97 aaKnown RBP3.07□□□□□ -1.92
SCAF11-213ENST00000550629 TMEM254Q8TBM7 123 aa3.07□□□□□ -1.92
SCAF11-213ENST00000550629 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
SCAF11-213ENST00000550629 LRP2P98164 4655 aa3.07□□□□□ -1.92
SCAF11-213ENST00000550629 UBR4Q5T4S7 5183 aa3.06□□□□□ -1.92
SCAF11-213ENST00000550629 hDV103S1A0JD37 113 aa3.06□□□□□ -1.92
SCAF11-213ENST00000550629 Q8N9L7 120 aa3.06□□□□□ -1.92
SCAF11-213ENST00000550629 HCG22E2RYF7 251 aa3.05□□□□□ -1.92
SCAF11-213ENST00000550629 CASC2Q6XLA1 102 aa3.05□□□□□ -1.92
SCAF11-213ENST00000550629 ATP11AUNQ6ZP68 121 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms