RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 A0A1B0GVX0 72 aa15.66■□□□□ 0.1
GNPTAB-206ENST00000549940 DMBT1Q9UGM3 2413 aaPredicted RBP15.65■□□□□ 0.1
GNPTAB-206ENST00000549940 IGHV6-1A0A0B4J1U7 121 aa15.64■□□□□ 0.09
GNPTAB-206ENST00000549940 FAM236AA0A1B0GUQ0 79 aa15.6■□□□□ 0.09
GNPTAB-206ENST00000549940 FAM236BA0A1B0GV22 79 aa15.6■□□□□ 0.09
GNPTAB-206ENST00000549940 RETNLBQ9BQ08 111 aa15.6■□□□□ 0.09
GNPTAB-206ENST00000549940 J3QL48 77 aa15.59■□□□□ 0.09
GNPTAB-206ENST00000549940 HCG22E2RYF7 251 aa15.57■□□□□ 0.08
GNPTAB-206ENST00000549940 SCGB1A1P11684 91 aa15.57■□□□□ 0.08
GNPTAB-206ENST00000549940 C8orf17Q9NRJ1 99 aa15.54■□□□□ 0.08
GNPTAB-206ENST00000549940 C8orf87E5RJ46 101 aa15.52■□□□□ 0.08
GNPTAB-206ENST00000549940 WFDC13Q8IUB5 93 aa15.52■□□□□ 0.08
GNPTAB-206ENST00000549940 MMP24-AS1A0A0U1RRL7 71 aa15.51■□□□□ 0.07
GNPTAB-206ENST00000549940 CASC2Q6XLA1 102 aa15.5■□□□□ 0.07
GNPTAB-206ENST00000549940 LINC00313P59037 77 aa15.48■□□□□ 0.07
GNPTAB-206ENST00000549940 hDV103S1A0JD37 113 aa15.48■□□□□ 0.07
GNPTAB-206ENST00000549940 FP248Q71RG6 208 aaPredicted RBP15.46■□□□□ 0.07
GNPTAB-206ENST00000549940 NOTCH2NLQ7Z3S9 236 aa15.46■□□□□ 0.07
GNPTAB-206ENST00000549940 ATOX1O00244 68 aa15.41■□□□□ 0.06
GNPTAB-206ENST00000549940 TMEM254Q8TBM7 123 aa15.38■□□□□ 0.05
GNPTAB-206ENST00000549940 MRPL34Q9BQ48 92 aaKnown RBP15.36■□□□□ 0.05
GNPTAB-206ENST00000549940 IGLV7-46A0A075B6I9 117 aa15.35■□□□□ 0.05
GNPTAB-206ENST00000549940 PRR4Q16378 134 aa15.33■□□□□ 0.04
GNPTAB-206ENST00000549940 C9orf92A6NGG3 77 aa15.32■□□□□ 0.04
GNPTAB-206ENST00000549940 SMIM20Q8N5G0 67 aa15.32■□□□□ 0.04
GNPTAB-206ENST00000549940 PCLOQ9Y6V0 5065 aa15.31■□□□□ 0.04
GNPTAB-206ENST00000549940 ANAPC13Q9BS18 74 aa15.29■□□□□ 0.04
GNPTAB-206ENST00000549940 NDUFS5O43920 106 aa15.28■□□□□ 0.04
GNPTAB-206ENST00000549940 KRTAP16-1A8MUX0 517 aa15.25■□□□□ 0.03
GNPTAB-206ENST00000549940 OCR1Q9BZK8 76 aa15.23■□□□□ 0.03
GNPTAB-206ENST00000549940 TRAV7A0A075B6U4 112 aa15.22■□□□□ 0.03
GNPTAB-206ENST00000549940 SERP2Q8N6R1 65 aa15.19■□□□□ 0.02
GNPTAB-206ENST00000549940 Q8N9P0 234 aaPredicted RBP15.19■□□□□ 0.02
GNPTAB-206ENST00000549940 TP53AIP1Q9HCN2 124 aa15.19■□□□□ 0.02
GNPTAB-206ENST00000549940 KRTAP13-3Q3SY46 172 aa15.16■□□□□ 0.02
GNPTAB-206ENST00000549940 UQCRQO14949 82 aa15.14■□□□□ 0.01
GNPTAB-206ENST00000549940 COX7CP15954 63 aa15.09■□□□□ 0.01
GNPTAB-206ENST00000549940 PCP4P48539 62 aa15.09■□□□□ 0.01
GNPTAB-206ENST00000549940 TPRXLQ17RH7 258 aa15.09■□□□□ 0.01
GNPTAB-206ENST00000549940 C20orf166-AS1Q96NR2 134 aa15.08■□□□□ 0
GNPTAB-206ENST00000549940 A8MUU9 505 aa15.05■□□□□ -0
GNPTAB-206ENST00000549940 C5orf47Q569G3 176 aa15.05■□□□□ -0
GNPTAB-206ENST00000549940 TRAV22A0A0B4J277 110 aa15.01□□□□□ -0.01
GNPTAB-206ENST00000549940 XP32Q5T750 250 aa15□□□□□ -0.01
GNPTAB-206ENST00000549940 Q75L30 129 aa15□□□□□ -0.01
GNPTAB-206ENST00000549940 MP68P56378 58 aa15□□□□□ -0.01
GNPTAB-206ENST00000549940 H0Y9P7 68 aa14.98□□□□□ -0.01
GNPTAB-206ENST00000549940 Q5W150 140 aa14.94□□□□□ -0.02
GNPTAB-206ENST00000549940 C20orf197Q8N268 126 aa14.93□□□□□ -0.02
GNPTAB-206ENST00000549940 ZCCHC13Q8WW36 166 aaKnown RBP14.92□□□□□ -0.02
GNPTAB-206ENST00000549940 CCDC179H3BU77 68 aa14.91□□□□□ -0.02
GNPTAB-206ENST00000549940 HERC1Q15751 4861 aa14.91□□□□□ -0.02
GNPTAB-206ENST00000549940 RPL37P61927 97 aaKnown RBP14.9□□□□□ -0.02
GNPTAB-206ENST00000549940 LINC00208Q96KT6 92 aa14.88□□□□□ -0.03
GNPTAB-206ENST00000549940 H3BPC8 53 aa14.87□□□□□ -0.03
GNPTAB-206ENST00000549940 ATP11AUNQ6ZP68 121 aa14.87□□□□□ -0.03
GNPTAB-206ENST00000549940 SNURFQ9Y675 71 aa14.84□□□□□ -0.03
GNPTAB-206ENST00000549940 LPAP08519 4548 aa14.84□□□□□ -0.03
GNPTAB-206ENST00000549940 C1orf64Q8NEQ6 169 aa14.84□□□□□ -0.03
GNPTAB-206ENST00000549940 A0A0U1RQV1 116 aa14.83□□□□□ -0.04
GNPTAB-206ENST00000549940 KLKP1Q107X0 134 aa14.8□□□□□ -0.04
GNPTAB-206ENST00000549940 LOC101927531A0A1B0GV80 90 aa14.77□□□□□ -0.05
GNPTAB-206ENST00000549940 LRP2P98164 4655 aa14.71□□□□□ -0.05
GNPTAB-206ENST00000549940 HMCN2Q8NDA2 5059 aa14.7□□□□□ -0.06
GNPTAB-206ENST00000549940 IGKV2D-30A0A075B6S6 120 aa14.69□□□□□ -0.06
GNPTAB-206ENST00000549940 IGKV2-30P06310 120 aa14.69□□□□□ -0.06
GNPTAB-206ENST00000549940 NDUFC1O43677 76 aa14.66□□□□□ -0.06
GNPTAB-206ENST00000549940 CYP4F30PQ9H0H9 118 aa14.66□□□□□ -0.06
GNPTAB-206ENST00000549940 PCOTHQ58A44 107 aa14.65□□□□□ -0.06
GNPTAB-206ENST00000549940 CYSTM1Q9H1C7 97 aa14.65□□□□□ -0.06
GNPTAB-206ENST00000549940 C7orf65Q6ZTY9 151 aa14.64□□□□□ -0.07
GNPTAB-206ENST00000549940 SEC61BP60468 96 aaKnown RBP14.61□□□□□ -0.07
GNPTAB-206ENST00000549940 SPINK7P58062 85 aa14.57□□□□□ -0.08
GNPTAB-206ENST00000549940 H7BZZ5 65 aa14.55□□□□□ -0.08
GNPTAB-206ENST00000549940 HRES1P13985 223 aa14.42□□□□□ -0.1
GNPTAB-206ENST00000549940 TMEM258P61165 79 aa14.41□□□□□ -0.1
GNPTAB-206ENST00000549940 MUC17Q685J3 4493 aa14.39□□□□□ -0.11
GNPTAB-206ENST00000549940 SPANXA2-OT1Q8N9U9 137 aa14.38□□□□□ -0.11
GNPTAB-206ENST00000549940 FAM236DA0A1B0GTK5 79 aa14.31□□□□□ -0.12
GNPTAB-206ENST00000549940 FAM236CP0DP71 79 aa14.31□□□□□ -0.12
GNPTAB-206ENST00000549940 C4orf26Q17RF5 130 aa14.3□□□□□ -0.12
GNPTAB-206ENST00000549940 ATP5EP56381 51 aaPredicted RBP14.29□□□□□ -0.12
GNPTAB-206ENST00000549940 KRTAP4-1Q9BYQ7 146 aa14.18□□□□□ -0.14
GNPTAB-206ENST00000549940 COX6B2Q6YFQ2 88 aa14.16□□□□□ -0.14
GNPTAB-206ENST00000549940 DMAC1Q96GE9 116 aa14.15□□□□□ -0.14
GNPTAB-206ENST00000549940 RBM12B-AS1Q9P1G2 102 aa14.14□□□□□ -0.15
GNPTAB-206ENST00000549940 A8MUN3 132 aa14.11□□□□□ -0.15
GNPTAB-206ENST00000549940 ACYP2P14621 99 aa14.09□□□□□ -0.15
GNPTAB-206ENST00000549940 MPLKIPQ8TAP9 179 aa14.08□□□□□ -0.16
GNPTAB-206ENST00000549940 UBR4Q5T4S7 5183 aa14.04□□□□□ -0.16
GNPTAB-206ENST00000549940 KRTAP3-1Q9BYR8 98 aa14.04□□□□□ -0.16
GNPTAB-206ENST00000549940 MUC2Q02817 5179 aa13.99□□□□□ -0.17
GNPTAB-206ENST00000549940 SERP1Q9Y6X1 66 aa13.96□□□□□ -0.17
GNPTAB-206ENST00000549940 COA5Q86WW8 74 aa13.95□□□□□ -0.18
GNPTAB-206ENST00000549940 RNF213Q63HN8 5207 aa13.94□□□□□ -0.18
GNPTAB-206ENST00000549940 CHKB-CPT1BH3BT56 60 aa13.89□□□□□ -0.19
GNPTAB-206ENST00000549940 H1FX-AS1Q4G0G2 97 aa13.89□□□□□ -0.19
GNPTAB-206ENST00000549940 RPS28P62857 69 aaKnown RBP13.82□□□□□ -0.2
GNPTAB-206ENST00000549940 S4R3F8 94 aa13.75□□□□□ -0.21
GNPTAB-206ENST00000549940 KRTAP19-2Q3LHN2 52 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms