RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
ERBB3-210ENST00000549472 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
ERBB3-210ENST00000549472 UQCRQO14949 82 aa6.82□□□□□ -1.32
ERBB3-210ENST00000549472 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
ERBB3-210ENST00000549472 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
ERBB3-210ENST00000549472 CASC2Q6XLA1 102 aa6.8□□□□□ -1.32
ERBB3-210ENST00000549472 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
ERBB3-210ENST00000549472 J3QL48 77 aa6.79□□□□□ -1.32
ERBB3-210ENST00000549472 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
ERBB3-210ENST00000549472 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
ERBB3-210ENST00000549472 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
ERBB3-210ENST00000549472 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
ERBB3-210ENST00000549472 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
ERBB3-210ENST00000549472 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
ERBB3-210ENST00000549472 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
ERBB3-210ENST00000549472 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
ERBB3-210ENST00000549472 CCDC179H3BU77 68 aa6.77□□□□□ -1.33
ERBB3-210ENST00000549472 HERC2O95714 4834 aa6.76□□□□□ -1.33
ERBB3-210ENST00000549472 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
ERBB3-210ENST00000549472 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
ERBB3-210ENST00000549472 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
ERBB3-210ENST00000549472 LINC00313P59037 77 aa6.7□□□□□ -1.34
ERBB3-210ENST00000549472 NOTCH2NLQ7Z3S9 236 aa6.7□□□□□ -1.34
ERBB3-210ENST00000549472 KLKP1Q107X0 134 aa6.69□□□□□ -1.34
ERBB3-210ENST00000549472 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
ERBB3-210ENST00000549472 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
ERBB3-210ENST00000549472 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
ERBB3-210ENST00000549472 A0A0U1RQV1 116 aa6.65□□□□□ -1.34
ERBB3-210ENST00000549472 MT1HL1P0DM35 61 aa6.65□□□□□ -1.34
ERBB3-210ENST00000549472 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
ERBB3-210ENST00000549472 H3BPC8 53 aa6.64□□□□□ -1.35
ERBB3-210ENST00000549472 MP68P56378 58 aa6.64□□□□□ -1.35
ERBB3-210ENST00000549472 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
ERBB3-210ENST00000549472 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
ERBB3-210ENST00000549472 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
ERBB3-210ENST00000549472 NDUFC1O43677 76 aa6.63□□□□□ -1.35
ERBB3-210ENST00000549472 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
ERBB3-210ENST00000549472 NDUFS5O43920 106 aa6.62□□□□□ -1.35
ERBB3-210ENST00000549472 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
ERBB3-210ENST00000549472 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
ERBB3-210ENST00000549472 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
ERBB3-210ENST00000549472 H0Y9P7 68 aa6.61□□□□□ -1.35
ERBB3-210ENST00000549472 SNURFQ9Y675 71 aa6.61□□□□□ -1.35
ERBB3-210ENST00000549472 TNXBP22105 4242 aa6.6□□□□□ -1.35
ERBB3-210ENST00000549472 MYCBP2O75592 4640 aa6.6□□□□□ -1.35
ERBB3-210ENST00000549472 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
ERBB3-210ENST00000549472 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
ERBB3-210ENST00000549472 H7BZZ5 65 aa6.58□□□□□ -1.36
ERBB3-210ENST00000549472 TMEM258P61165 79 aa6.57□□□□□ -1.36
ERBB3-210ENST00000549472 RETNLBQ9BQ08 111 aa6.57□□□□□ -1.36
ERBB3-210ENST00000549472 PRR4Q16378 134 aa6.56□□□□□ -1.36
ERBB3-210ENST00000549472 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
ERBB3-210ENST00000549472 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
ERBB3-210ENST00000549472 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
ERBB3-210ENST00000549472 Q5W150 140 aa6.52□□□□□ -1.37
ERBB3-210ENST00000549472 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
ERBB3-210ENST00000549472 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
ERBB3-210ENST00000549472 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
ERBB3-210ENST00000549472 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
ERBB3-210ENST00000549472 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
ERBB3-210ENST00000549472 A8MUU9 505 aa6.5□□□□□ -1.37
ERBB3-210ENST00000549472 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
ERBB3-210ENST00000549472 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
ERBB3-210ENST00000549472 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
ERBB3-210ENST00000549472 Q75L30 129 aa6.46□□□□□ -1.38
ERBB3-210ENST00000549472 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
ERBB3-210ENST00000549472 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
ERBB3-210ENST00000549472 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
ERBB3-210ENST00000549472 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
ERBB3-210ENST00000549472 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
ERBB3-210ENST00000549472 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
ERBB3-210ENST00000549472 XP32Q5T750 250 aa6.39□□□□□ -1.39
ERBB3-210ENST00000549472 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
ERBB3-210ENST00000549472 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
ERBB3-210ENST00000549472 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
ERBB3-210ENST00000549472 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
ERBB3-210ENST00000549472 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
ERBB3-210ENST00000549472 HRES1P13985 223 aa6.32□□□□□ -1.4
ERBB3-210ENST00000549472 SPINK7P58062 85 aa6.28□□□□□ -1.4
ERBB3-210ENST00000549472 HERC1Q15751 4861 aa6.28□□□□□ -1.4
ERBB3-210ENST00000549472 SEC61BP60468 96 aaKnown RBP6.27□□□□□ -1.41
ERBB3-210ENST00000549472 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
ERBB3-210ENST00000549472 ACYP2P14621 99 aa6.23□□□□□ -1.41
ERBB3-210ENST00000549472 COA5Q86WW8 74 aa6.22□□□□□ -1.41
ERBB3-210ENST00000549472 A8MUN3 132 aa6.21□□□□□ -1.42
ERBB3-210ENST00000549472 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
ERBB3-210ENST00000549472 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
ERBB3-210ENST00000549472 C4orf26Q17RF5 130 aa6.18□□□□□ -1.42
ERBB3-210ENST00000549472 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.42
ERBB3-210ENST00000549472 LPAP08519 4548 aa6.14□□□□□ -1.43
ERBB3-210ENST00000549472 LRP2P98164 4655 aa6.11□□□□□ -1.43
ERBB3-210ENST00000549472 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
ERBB3-210ENST00000549472 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
ERBB3-210ENST00000549472 SEC61GP60059 68 aa6.08□□□□□ -1.44
ERBB3-210ENST00000549472 Q1T7F1 81 aa6.08□□□□□ -1.44
ERBB3-210ENST00000549472 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
ERBB3-210ENST00000549472 V9GYY9 64 aa6.08□□□□□ -1.44
ERBB3-210ENST00000549472 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
ERBB3-210ENST00000549472 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
ERBB3-210ENST00000549472 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms