RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
USP15-209ENST00000548620 HECTD1Q9ULT8 2610 aa0.2□□□□□ -2.38
USP15-209ENST00000548620 SETXQ7Z333 2677 aaKnown RBP0.2□□□□□ -2.38
USP15-209ENST00000548620 IGSF10Q6WRI0 2623 aa0.2□□□□□ -2.38
USP15-209ENST00000548620 FAM208AQ9UK61 1670 aaKnown RBP0.2□□□□□ -2.38
USP15-209ENST00000548620 IQGAP2Q13576 1575 aa0.19□□□□□ -2.38
USP15-209ENST00000548620 CEP290O15078 2479 aa0.19□□□□□ -2.38
USP15-209ENST00000548620 PKD1L2Q7Z442 2459 aa0.19□□□□□ -2.38
USP15-209ENST00000548620 H3BNG1 76 aa0.19□□□□□ -2.38
USP15-209ENST00000548620 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
USP15-209ENST00000548620 DCHS2Q6V1P9 2916 aa0.18□□□□□ -2.38
USP15-209ENST00000548620 HMCN2Q8NDA2 5059 aa0.18□□□□□ -2.38
USP15-209ENST00000548620 KRTAP6-2Q3LI66 62 aa0.18□□□□□ -2.38
USP15-209ENST00000548620 SMIM2Q9BVW6 85 aa0.18□□□□□ -2.38
USP15-209ENST00000548620 HSPG2P98160 4391 aa0.17□□□□□ -2.38
USP15-209ENST00000548620 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
USP15-209ENST00000548620 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
USP15-209ENST00000548620 PDZD2O15018 2839 aa0.17□□□□□ -2.38
USP15-209ENST00000548620 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
USP15-209ENST00000548620 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
USP15-209ENST00000548620 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
USP15-209ENST00000548620 PKD1P98161 4303 aa0.15□□□□□ -2.38
USP15-209ENST00000548620 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.39
USP15-209ENST00000548620 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
USP15-209ENST00000548620 CREBBPQ92793 2442 aa0.14□□□□□ -2.39
USP15-209ENST00000548620 MMP24-AS1A0A0U1RRL7 71 aa0.14□□□□□ -2.39
USP15-209ENST00000548620 STAB1Q9NY15 2570 aa0.14□□□□□ -2.39
USP15-209ENST00000548620 NF1P21359 2839 aa0.14□□□□□ -2.39
USP15-209ENST00000548620 SPTBN4Q9H254 2564 aa0.13□□□□□ -2.39
USP15-209ENST00000548620 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
USP15-209ENST00000548620 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
USP15-209ENST00000548620 SVEP1Q4LDE5 3571 aa0.13□□□□□ -2.39
USP15-209ENST00000548620 DMXL1Q9Y485 3027 aa0.13□□□□□ -2.39
USP15-209ENST00000548620 CUBNO60494 3623 aa0.12□□□□□ -2.39
USP15-209ENST00000548620 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
USP15-209ENST00000548620 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
USP15-209ENST00000548620 M0QY20 66 aa0.11□□□□□ -2.39
USP15-209ENST00000548620 NDUFA1O15239 70 aa0.11□□□□□ -2.39
USP15-209ENST00000548620 SPRR2AP35326 72 aa0.11□□□□□ -2.39
USP15-209ENST00000548620 CLTCL1P53675 1640 aa0.11□□□□□ -2.39
USP15-209ENST00000548620 TOP2AP11388 1531 aaKnown RBP0.11□□□□□ -2.39
USP15-209ENST00000548620 COL6A3P12111 3177 aa0.1□□□□□ -2.39
USP15-209ENST00000548620 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
USP15-209ENST00000548620 SACSQ9NZJ4 4579 aa0.09□□□□□ -2.39
USP15-209ENST00000548620 FLNCQ14315 2725 aa0.09□□□□□ -2.39
USP15-209ENST00000548620 PKHD1L1Q86WI1 4243 aa0.09□□□□□ -2.39
USP15-209ENST00000548620 GCN1Q92616 2671 aaKnown RBP0.09□□□□□ -2.39
USP15-209ENST00000548620 DEFB110Q30KQ9 67 aa0.09□□□□□ -2.4
USP15-209ENST00000548620 FLGP20930 4061 aaPredicted RBP0.08□□□□□ -2.4
USP15-209ENST00000548620 SPRR2EP22531 72 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 DEFB131AP59861 70 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 PKHD1P08F94 4074 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 TRPM2O94759 1503 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 ATP7AQ04656 1500 aa0.08□□□□□ -2.4
USP15-209ENST00000548620 LRP2P98164 4655 aa0.07□□□□□ -2.4
USP15-209ENST00000548620 MT1AP04731 61 aa0.07□□□□□ -2.4
USP15-209ENST00000548620 TACC2O95359 2948 aa0.07□□□□□ -2.4
USP15-209ENST00000548620 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
USP15-209ENST00000548620 SETD2Q9BYW2 2564 aaPredicted RBP0.06□□□□□ -2.4
USP15-209ENST00000548620 SPG11Q96JI7 2443 aa0.06□□□□□ -2.4
USP15-209ENST00000548620 TNP1P09430 55 aa0.06□□□□□ -2.4
USP15-209ENST00000548620 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
USP15-209ENST00000548620 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
USP15-209ENST00000548620 MTORP42345 2549 aa0.06□□□□□ -2.4
USP15-209ENST00000548620 ACACAQ13085 2346 aa0.05□□□□□ -2.4
USP15-209ENST00000548620 COL6A5A8TX70 2615 aa0.05□□□□□ -2.4
USP15-209ENST00000548620 A8MTW9 85 aa0.05□□□□□ -2.4
USP15-209ENST00000548620 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
USP15-209ENST00000548620 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
USP15-209ENST00000548620 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
USP15-209ENST00000548620 M0QZ58 72 aa0.04□□□□□ -2.4
USP15-209ENST00000548620 AKAP9Q99996 3911 aa0.03□□□□□ -2.4
USP15-209ENST00000548620 SAMD9LQ8IVG5 1584 aa0.03□□□□□ -2.4
USP15-209ENST00000548620 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.4
USP15-209ENST00000548620 KALRNO60229 2985 aa0.03□□□□□ -2.4
USP15-209ENST00000548620 SPRR2FQ96RM1 72 aa0.03□□□□□ -2.4
USP15-209ENST00000548620 FAM186AA6NE01 2351 aa0.02□□□□□ -2.41
USP15-209ENST00000548620 POLR2KP53803 58 aaKnown RBP0.02□□□□□ -2.41
USP15-209ENST00000548620 LRRK2Q5S007 2527 aa0.02□□□□□ -2.41
USP15-209ENST00000548620 ANKHD1Q8IWZ3 2542 aaKnown RBP0.02□□□□□ -2.41
USP15-209ENST00000548620 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
USP15-209ENST00000548620 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
USP15-209ENST00000548620 NBEAL2Q6ZNJ1 2754 aa0.01□□□□□ -2.41
USP15-209ENST00000548620 CLPSL2Q6UWE3 100 aa0.01□□□□□ -2.41
USP15-209ENST00000548620 ACACBO00763 2458 aa0.01□□□□□ -2.41
USP15-209ENST00000548620 DNAH11Q96DT5 4516 aa0□□□□□ -2.41
USP15-209ENST00000548620 FASNP49327 2511 aaKnown RBP0□□□□□ -2.41
USP15-209ENST00000548620 SPENQ96T58 3664 aaKnown RBP0□□□□□ -2.41
USP15-209ENST00000548620 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
USP15-209ENST00000548620 COL12A1Q99715 3063 aa-0.01□□□□□ -2.41
USP15-209ENST00000548620 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
USP15-209ENST00000548620 STAB2Q8WWQ8 2551 aa-0.01□□□□□ -2.41
USP15-209ENST00000548620 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
USP15-209ENST00000548620 DNAH6Q9C0G6 4158 aa-0.01□□□□□ -2.41
USP15-209ENST00000548620 HTTP42858 3142 aa-0.01□□□□□ -2.41
USP15-209ENST00000548620 ANKRD11Q6UB99 2663 aaPredicted RBP-0.01□□□□□ -2.41
USP15-209ENST00000548620 CCDC168Q8NDH2 2452 aa-0.02□□□□□ -2.41
USP15-209ENST00000548620 RANBP2P49792 3224 aaKnown RBP-0.02□□□□□ -2.41
USP15-209ENST00000548620 MYO18BQ8IUG5 2567 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms