RNA–Protein interactions for RNA: ENST00000548545.1

MRPL42-204, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene MRPL42, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-204ENST00000548545 SPRR2BP35325 72 aa0.35□□□□□ -2.35
MRPL42-204ENST00000548545 POLR2KP53803 58 aaKnown RBP0.35□□□□□ -2.35
MRPL42-204ENST00000548545 WNK1Q9H4A3 2382 aa0.35□□□□□ -2.35
MRPL42-204ENST00000548545 ACANP16112 2415 aa0.35□□□□□ -2.35
MRPL42-204ENST00000548545 APC2O95996 2303 aa0.34□□□□□ -2.36
MRPL42-204ENST00000548545 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
MRPL42-204ENST00000548545 BSNQ9UPA5 3926 aa0.33□□□□□ -2.36
MRPL42-204ENST00000548545 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
MRPL42-204ENST00000548545 CREBBPQ92793 2442 aa0.33□□□□□ -2.36
MRPL42-204ENST00000548545 CEP290O15078 2479 aa0.33□□□□□ -2.36
MRPL42-204ENST00000548545 NBASA2RRP1 2371 aa0.33□□□□□ -2.36
MRPL42-204ENST00000548545 HRNRQ86YZ3 2850 aaPredicted RBP0.32□□□□□ -2.36
MRPL42-204ENST00000548545 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
MRPL42-204ENST00000548545 KMT2DO14686 5537 aa0.31□□□□□ -2.36
MRPL42-204ENST00000548545 RPL39P62891 51 aaKnown RBP0.31□□□□□ -2.36
MRPL42-204ENST00000548545 CLPSL2Q6UWE3 100 aa0.31□□□□□ -2.36
MRPL42-204ENST00000548545 NSD1Q96L73 2696 aaPredicted RBP0.31□□□□□ -2.36
MRPL42-204ENST00000548545 FAT2Q9NYQ8 4349 aa0.3□□□□□ -2.36
MRPL42-204ENST00000548545 SPART-AS1P0CW21 52 aa0.3□□□□□ -2.36
MRPL42-204ENST00000548545 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
MRPL42-204ENST00000548545 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
MRPL42-204ENST00000548545 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
MRPL42-204ENST00000548545 SPTBN4Q9H254 2564 aa0.29□□□□□ -2.36
MRPL42-204ENST00000548545 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
MRPL42-204ENST00000548545 NF1P21359 2839 aa0.28□□□□□ -2.36
MRPL42-204ENST00000548545 TOMM7Q9P0U1 55 aa0.28□□□□□ -2.36
MRPL42-204ENST00000548545 LRP1Q07954 4544 aaKnown RBP0.28□□□□□ -2.36
MRPL42-204ENST00000548545 SPRR2AP35326 72 aa0.27□□□□□ -2.37
MRPL42-204ENST00000548545 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
MRPL42-204ENST00000548545 RPL39LQ96EH5 51 aaKnown RBP0.26□□□□□ -2.37
MRPL42-204ENST00000548545 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
MRPL42-204ENST00000548545 DCHS2Q6V1P9 2916 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 MAST4O15021 2626 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 LEAP2Q969E1 77 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 DMXL1Q9Y485 3027 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 GCN1Q92616 2671 aaKnown RBP0.25□□□□□ -2.37
MRPL42-204ENST00000548545 MTORP42345 2549 aa0.25□□□□□ -2.37
MRPL42-204ENST00000548545 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
MRPL42-204ENST00000548545 HUWE1Q7Z6Z7 4374 aaKnown RBP0.24□□□□□ -2.37
MRPL42-204ENST00000548545 PDZD2O15018 2839 aa0.24□□□□□ -2.37
MRPL42-204ENST00000548545 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
MRPL42-204ENST00000548545 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
MRPL42-204ENST00000548545 STAB1Q9NY15 2570 aa0.24□□□□□ -2.37
MRPL42-204ENST00000548545 MYCBP2O75592 4640 aa0.24□□□□□ -2.37
MRPL42-204ENST00000548545 LYSTQ99698 3801 aa0.23□□□□□ -2.37
MRPL42-204ENST00000548545 MT1AP04731 61 aa0.23□□□□□ -2.37
MRPL42-204ENST00000548545 FLNCQ14315 2725 aa0.23□□□□□ -2.37
MRPL42-204ENST00000548545 PRKDCP78527 4128 aaKnown RBP0.23□□□□□ -2.37
MRPL42-204ENST00000548545 MROH2BQ7Z745 1585 aa0.21□□□□□ -2.38
MRPL42-204ENST00000548545 SPRR2EP22531 72 aa0.21□□□□□ -2.38
MRPL42-204ENST00000548545 LPAP08519 4548 aa0.21□□□□□ -2.38
MRPL42-204ENST00000548545 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
MRPL42-204ENST00000548545 A0A0C4DFX4 3053 aa0.21□□□□□ -2.38
MRPL42-204ENST00000548545 SETD2Q9BYW2 2564 aaPredicted RBP0.2□□□□□ -2.38
MRPL42-204ENST00000548545 HSPG2P98160 4391 aa0.2□□□□□ -2.38
MRPL42-204ENST00000548545 HMCN2Q8NDA2 5059 aa0.2□□□□□ -2.38
MRPL42-204ENST00000548545 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
MRPL42-204ENST00000548545 COL6A5A8TX70 2615 aa0.2□□□□□ -2.38
MRPL42-204ENST00000548545 ZZEF1O43149 2961 aa0.2□□□□□ -2.38
MRPL42-204ENST00000548545 UTP20O75691 2785 aaKnown RBP0.19□□□□□ -2.38
MRPL42-204ENST00000548545 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
MRPL42-204ENST00000548545 SPG11Q96JI7 2443 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 FLNAP21333 2647 aaKnown RBP0.18□□□□□ -2.38
MRPL42-204ENST00000548545 CUBNO60494 3623 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 TACC2O95359 2948 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 DUOX1Q9NRD9 1551 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 LRRK2Q5S007 2527 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 COL6A3P12111 3177 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 ACACAQ13085 2346 aa0.18□□□□□ -2.38
MRPL42-204ENST00000548545 ZFHX4Q86UP3 3567 aa0.17□□□□□ -2.38
MRPL42-204ENST00000548545 KRTAP8-1Q8IUC2 63 aa0.17□□□□□ -2.38
MRPL42-204ENST00000548545 TENM2Q9NT68 2774 aa0.17□□□□□ -2.38
MRPL42-204ENST00000548545 KMT2AQ03164 3969 aa0.17□□□□□ -2.38
MRPL42-204ENST00000548545 FASNP49327 2511 aaKnown RBP0.17□□□□□ -2.38
MRPL42-204ENST00000548545 ANKHD1Q8IWZ3 2542 aaKnown RBP0.17□□□□□ -2.38
MRPL42-204ENST00000548545 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
MRPL42-204ENST00000548545 DEFB104AQ8WTQ1 72 aa0.16□□□□□ -2.38
MRPL42-204ENST00000548545 KALRNO60229 2985 aa0.15□□□□□ -2.38
MRPL42-204ENST00000548545 RELNP78509 3460 aa0.15□□□□□ -2.38
MRPL42-204ENST00000548545 ZANQ9Y493 2812 aa0.15□□□□□ -2.38
MRPL42-204ENST00000548545 ARHGAP5-AS1Q96IT6 56 aa0.15□□□□□ -2.39
MRPL42-204ENST00000548545 NBEAQ8NFP9 2946 aa0.15□□□□□ -2.39
MRPL42-204ENST00000548545 ACACBO00763 2458 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 DEFB1P60022 68 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 LINC01590Q5TEZ4 76 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 RIF1Q5UIP0 2472 aaKnown RBP0.14□□□□□ -2.39
MRPL42-204ENST00000548545 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 SZT2Q5T011 3432 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 GCC2Q8IWJ2 1684 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 HIVEP1P15822 2718 aa0.14□□□□□ -2.39
MRPL42-204ENST00000548545 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
MRPL42-204ENST00000548545 SPENQ96T58 3664 aaKnown RBP0.13□□□□□ -2.39
MRPL42-204ENST00000548545 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
MRPL42-204ENST00000548545 MYO15AQ9UKN7 3530 aa0.13□□□□□ -2.39
MRPL42-204ENST00000548545 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
MRPL42-204ENST00000548545 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
MRPL42-204ENST00000548545 SPEGQ15772 3267 aa0.12□□□□□ -2.39
MRPL42-204ENST00000548545 UNC80Q8N2C7 3258 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms