RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 CCKP06307 115 aa4.82□□□□□ -1.64
SMARCC2-205ENST00000548130 RBM3P98179 157 aaKnown RBP4.82□□□□□ -1.64
SMARCC2-205ENST00000548130 VPS25Q9BRG1 176 aa4.82□□□□□ -1.64
SMARCC2-205ENST00000548130 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
SMARCC2-205ENST00000548130 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
SMARCC2-205ENST00000548130 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 C9JAW5 83 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 PCOTHQ58A44 107 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 Q96NJ1 140 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 DSCR8Q96T75 97 aa4.8□□□□□ -1.64
SMARCC2-205ENST00000548130 A0A1W2PPM0 123 aa4.79□□□□□ -1.64
SMARCC2-205ENST00000548130 OBSCN-AS1Q96MR7 158 aa4.79□□□□□ -1.64
SMARCC2-205ENST00000548130 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
SMARCC2-205ENST00000548130 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
SMARCC2-205ENST00000548130 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
SMARCC2-205ENST00000548130 PCP4P48539 62 aa4.77□□□□□ -1.65
SMARCC2-205ENST00000548130 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
SMARCC2-205ENST00000548130 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
SMARCC2-205ENST00000548130 MTURNQ8N3F0 131 aa4.77□□□□□ -1.65
SMARCC2-205ENST00000548130 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
SMARCC2-205ENST00000548130 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
SMARCC2-205ENST00000548130 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
SMARCC2-205ENST00000548130 DSCR10P59022 87 aa4.75□□□□□ -1.65
SMARCC2-205ENST00000548130 COL5A1-AS1Q5SY13 56 aa4.75□□□□□ -1.65
SMARCC2-205ENST00000548130 Q6ZQT0 140 aa4.75□□□□□ -1.65
SMARCC2-205ENST00000548130 SPCS1Q9Y6A9 102 aa4.75□□□□□ -1.65
SMARCC2-205ENST00000548130 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
SMARCC2-205ENST00000548130 LOC110117498A0A087WWA1 95 aa4.74□□□□□ -1.65
SMARCC2-205ENST00000548130 H3BT86 120 aa4.73□□□□□ -1.65
SMARCC2-205ENST00000548130 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
SMARCC2-205ENST00000548130 PDE6GP18545 87 aa4.72□□□□□ -1.65
SMARCC2-205ENST00000548130 Q75L30 129 aa4.72□□□□□ -1.65
SMARCC2-205ENST00000548130 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
SMARCC2-205ENST00000548130 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
SMARCC2-205ENST00000548130 IGHV6-1A0A0B4J1U7 121 aa4.7□□□□□ -1.66
SMARCC2-205ENST00000548130 LINC00313P59037 77 aa4.7□□□□□ -1.66
SMARCC2-205ENST00000548130 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
SMARCC2-205ENST00000548130 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
SMARCC2-205ENST00000548130 A8MUU9 505 aa4.69□□□□□ -1.66
SMARCC2-205ENST00000548130 K7EP34 96 aa4.69□□□□□ -1.66
SMARCC2-205ENST00000548130 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
SMARCC2-205ENST00000548130 KRTAP16-1A8MUX0 517 aa4.68□□□□□ -1.66
SMARCC2-205ENST00000548130 A0A1B0GW54 56 aa4.67□□□□□ -1.66
SMARCC2-205ENST00000548130 J3KT08 172 aa4.67□□□□□ -1.66
SMARCC2-205ENST00000548130 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
SMARCC2-205ENST00000548130 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
SMARCC2-205ENST00000548130 C8orf87E5RJ46 101 aa4.66□□□□□ -1.66
SMARCC2-205ENST00000548130 NREPQ16612 68 aa4.66□□□□□ -1.66
SMARCC2-205ENST00000548130 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.67
SMARCC2-205ENST00000548130 A8MWP4 228 aa4.64□□□□□ -1.67
SMARCC2-205ENST00000548130 NDUFB1O75438 58 aa4.64□□□□□ -1.67
SMARCC2-205ENST00000548130 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
SMARCC2-205ENST00000548130 GTF2H5Q6ZYL4 71 aa4.63□□□□□ -1.67
SMARCC2-205ENST00000548130 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
SMARCC2-205ENST00000548130 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
SMARCC2-205ENST00000548130 PRR15Q8IV56 129 aa4.6□□□□□ -1.67
SMARCC2-205ENST00000548130 Q6ZVQ6 151 aa4.59□□□□□ -1.67
SMARCC2-205ENST00000548130 F8W1H4 67 aa4.58□□□□□ -1.68
SMARCC2-205ENST00000548130 K7EQZ3 153 aa4.58□□□□□ -1.68
SMARCC2-205ENST00000548130 BPY2O14599 106 aa4.58□□□□□ -1.68
SMARCC2-205ENST00000548130 MT1HP80294 61 aa4.58□□□□□ -1.68
SMARCC2-205ENST00000548130 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
SMARCC2-205ENST00000548130 ETDBQ3ZM63 59 aa4.57□□□□□ -1.68
SMARCC2-205ENST00000548130 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
SMARCC2-205ENST00000548130 LINC00846Q9NV44 126 aa4.57□□□□□ -1.68
SMARCC2-205ENST00000548130 K7ERU9 68 aa4.56□□□□□ -1.68
SMARCC2-205ENST00000548130 Q8N9L7 120 aa4.56□□□□□ -1.68
SMARCC2-205ENST00000548130 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
SMARCC2-205ENST00000548130 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
SMARCC2-205ENST00000548130 SCGB1A1P11684 91 aa4.54□□□□□ -1.68
SMARCC2-205ENST00000548130 TMEM254Q8TBM7 123 aa4.54□□□□□ -1.68
SMARCC2-205ENST00000548130 MRPL34Q9BQ48 92 aaKnown RBP4.54□□□□□ -1.68
SMARCC2-205ENST00000548130 UBL5Q9BZL1 73 aa4.54□□□□□ -1.68
SMARCC2-205ENST00000548130 hDV103S1A0JD37 113 aa4.53□□□□□ -1.68
SMARCC2-205ENST00000548130 M0R2T5 61 aa4.52□□□□□ -1.69
SMARCC2-205ENST00000548130 HRES1P13985 223 aa4.52□□□□□ -1.69
SMARCC2-205ENST00000548130 WFDC13Q8IUB5 93 aa4.52□□□□□ -1.69
SMARCC2-205ENST00000548130 NDUFS5O43920 106 aa4.51□□□□□ -1.69
SMARCC2-205ENST00000548130 SPINK7P58062 85 aa4.5□□□□□ -1.69
SMARCC2-205ENST00000548130 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
SMARCC2-205ENST00000548130 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
SMARCC2-205ENST00000548130 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
SMARCC2-205ENST00000548130 CASC2Q6XLA1 102 aa4.49□□□□□ -1.69
SMARCC2-205ENST00000548130 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
SMARCC2-205ENST00000548130 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
SMARCC2-205ENST00000548130 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
SMARCC2-205ENST00000548130 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
SMARCC2-205ENST00000548130 HCG22E2RYF7 251 aa4.46□□□□□ -1.7
SMARCC2-205ENST00000548130 Q5W150 140 aa4.45□□□□□ -1.7
SMARCC2-205ENST00000548130 CXCL6P80162 114 aa4.44□□□□□ -1.7
SMARCC2-205ENST00000548130 ACYP1P07311 99 aa4.43□□□□□ -1.7
SMARCC2-205ENST00000548130 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
SMARCC2-205ENST00000548130 J3QR89 54 aa4.42□□□□□ -1.7
SMARCC2-205ENST00000548130 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
SMARCC2-205ENST00000548130 FAM240AA0A1B0GVK7 77 aa4.41□□□□□ -1.7
SMARCC2-205ENST00000548130 C7orf65Q6ZTY9 151 aa4.39□□□□□ -1.71
SMARCC2-205ENST00000548130 ATP5EP2Q5VTU8 51 aa4.37□□□□□ -1.71
SMARCC2-205ENST00000548130 HIST1H4AP62805 103 aaKnown RBP4.36□□□□□ -1.71
SMARCC2-205ENST00000548130 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms