RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 H0Y9P7 68 aa7.54□□□□□ -1.2
SCAF11-209ENST00000547018 FAT1Q14517 4588 aa7.51□□□□□ -1.21
SCAF11-209ENST00000547018 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
SCAF11-209ENST00000547018 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
SCAF11-209ENST00000547018 H3BS24 57 aa7.49□□□□□ -1.21
SCAF11-209ENST00000547018 Q96NJ1 140 aa7.49□□□□□ -1.21
SCAF11-209ENST00000547018 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
SCAF11-209ENST00000547018 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SCAF11-209ENST00000547018 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
SCAF11-209ENST00000547018 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
SCAF11-209ENST00000547018 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
SCAF11-209ENST00000547018 SACSQ9NZJ4 4579 aa7.48□□□□□ -1.21
SCAF11-209ENST00000547018 NDUFC1O43677 76 aa7.47□□□□□ -1.21
SCAF11-209ENST00000547018 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
SCAF11-209ENST00000547018 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
SCAF11-209ENST00000547018 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-209ENST00000547018 A0A1B0GVX0 72 aa7.46□□□□□ -1.22
SCAF11-209ENST00000547018 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
SCAF11-209ENST00000547018 A8MU10 97 aa7.45□□□□□ -1.22
SCAF11-209ENST00000547018 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
SCAF11-209ENST00000547018 PSPHP1O15172 72 aa7.43□□□□□ -1.22
SCAF11-209ENST00000547018 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
SCAF11-209ENST00000547018 PKD1P98161 4303 aa7.43□□□□□ -1.22
SCAF11-209ENST00000547018 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
SCAF11-209ENST00000547018 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
SCAF11-209ENST00000547018 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.22
SCAF11-209ENST00000547018 Q6ZSA8 131 aa7.4□□□□□ -1.23
SCAF11-209ENST00000547018 MRPL34Q9BQ48 92 aaKnown RBP7.39□□□□□ -1.23
SCAF11-209ENST00000547018 SSBP3-AS1Q7Z2R9 100 aa7.38□□□□□ -1.23
SCAF11-209ENST00000547018 LCE6AA0A183 80 aa7.36□□□□□ -1.23
SCAF11-209ENST00000547018 KRTAP21-3Q3LHN1 58 aa7.35□□□□□ -1.23
SCAF11-209ENST00000547018 ZCCHC13Q8WW36 166 aaKnown RBP7.35□□□□□ -1.23
SCAF11-209ENST00000547018 LINC00313P59037 77 aa7.34□□□□□ -1.23
SCAF11-209ENST00000547018 Q5W150 140 aa7.34□□□□□ -1.23
SCAF11-209ENST00000547018 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
SCAF11-209ENST00000547018 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
SCAF11-209ENST00000547018 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
SCAF11-209ENST00000547018 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
SCAF11-209ENST00000547018 ATP5EP56381 51 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-209ENST00000547018 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
SCAF11-209ENST00000547018 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
SCAF11-209ENST00000547018 IGKV2-30P06310 120 aa7.29□□□□□ -1.24
SCAF11-209ENST00000547018 Q8N9P0 234 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-209ENST00000547018 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
SCAF11-209ENST00000547018 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
SCAF11-209ENST00000547018 A8MUN3 132 aa7.25□□□□□ -1.25
SCAF11-209ENST00000547018 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
SCAF11-209ENST00000547018 LIMD2Q9BT23 127 aa7.23□□□□□ -1.25
SCAF11-209ENST00000547018 RYR2Q92736 4967 aa7.23□□□□□ -1.25
SCAF11-209ENST00000547018 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
SCAF11-209ENST00000547018 Q1T7F1 81 aa7.21□□□□□ -1.25
SCAF11-209ENST00000547018 COA5Q86WW8 74 aa7.2□□□□□ -1.26
SCAF11-209ENST00000547018 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
SCAF11-209ENST00000547018 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
SCAF11-209ENST00000547018 H3BPC8 53 aa7.18□□□□□ -1.26
SCAF11-209ENST00000547018 SPINK1P00995 79 aa7.18□□□□□ -1.26
SCAF11-209ENST00000547018 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
SCAF11-209ENST00000547018 RYR3Q15413 4870 aa7.17□□□□□ -1.26
SCAF11-209ENST00000547018 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
SCAF11-209ENST00000547018 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
SCAF11-209ENST00000547018 KIAA1109Q2LD37 5005 aa7.16□□□□□ -1.26
SCAF11-209ENST00000547018 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.26
SCAF11-209ENST00000547018 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
SCAF11-209ENST00000547018 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
SCAF11-209ENST00000547018 HRES1P13985 223 aa7.13□□□□□ -1.27
SCAF11-209ENST00000547018 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
SCAF11-209ENST00000547018 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
SCAF11-209ENST00000547018 Q5VV11 94 aa7.12□□□□□ -1.27
SCAF11-209ENST00000547018 SPANXA2-OT1Q8N9U9 137 aa7.11□□□□□ -1.27
SCAF11-209ENST00000547018 Q8N1X5 172 aa7.1□□□□□ -1.27
SCAF11-209ENST00000547018 LCA10Q71F78 164 aa7.09□□□□□ -1.27
SCAF11-209ENST00000547018 Q5VSD8 79 aa7.09□□□□□ -1.27
SCAF11-209ENST00000547018 A6NN06 94 aa7.08□□□□□ -1.28
SCAF11-209ENST00000547018 ATP11AUNQ6ZP68 121 aa7.07□□□□□ -1.28
SCAF11-209ENST00000547018 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
SCAF11-209ENST00000547018 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
SCAF11-209ENST00000547018 A6NED7 52 aa7.05□□□□□ -1.28
SCAF11-209ENST00000547018 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
SCAF11-209ENST00000547018 FAT3Q8TDW7 4589 aa7.05□□□□□ -1.28
SCAF11-209ENST00000547018 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
SCAF11-209ENST00000547018 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
SCAF11-209ENST00000547018 ACYP2P14621 99 aa7□□□□□ -1.29
SCAF11-209ENST00000547018 EPPK1P58107 5090 aaKnown RBP6.97□□□□□ -1.29
SCAF11-209ENST00000547018 KRTAP17-1Q9BYP8 105 aa6.97□□□□□ -1.29
SCAF11-209ENST00000547018 RYR1P21817 5038 aa6.97□□□□□ -1.29
SCAF11-209ENST00000547018 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.29
SCAF11-209ENST00000547018 HSPG2P98160 4391 aa6.96□□□□□ -1.29
SCAF11-209ENST00000547018 LINC01554Q52M75 96 aa6.96□□□□□ -1.3
SCAF11-209ENST00000547018 PKHD1L1Q86WI1 4243 aa6.94□□□□□ -1.3
SCAF11-209ENST00000547018 SPINK7P58062 85 aa6.89□□□□□ -1.31
SCAF11-209ENST00000547018 DMAC1Q96GE9 116 aa6.89□□□□□ -1.31
SCAF11-209ENST00000547018 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
SCAF11-209ENST00000547018 Q75L30 129 aa6.85□□□□□ -1.31
SCAF11-209ENST00000547018 A0A1B0GU69 56 aa6.84□□□□□ -1.31
SCAF11-209ENST00000547018 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
SCAF11-209ENST00000547018 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
SCAF11-209ENST00000547018 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
SCAF11-209ENST00000547018 A8MUU9 505 aa6.8□□□□□ -1.32
SCAF11-209ENST00000547018 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
SCAF11-209ENST00000547018 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms