RNA–Protein interactions for RNA: ENST00000546766.5

SLC25A3-204, Transcript of solute carrier family 25 member 3, humanhuman

TSL 1 (best)

Gene SLC25A3, Length 3,236 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-204ENST00000546766 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
SLC25A3-204ENST00000546766 MP68P56378 58 aa6.23□□□□□ -1.41
SLC25A3-204ENST00000546766 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
SLC25A3-204ENST00000546766 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.41
SLC25A3-204ENST00000546766 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
SLC25A3-204ENST00000546766 DNAH6Q9C0G6 4158 aa6.21□□□□□ -1.42
SLC25A3-204ENST00000546766 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
SLC25A3-204ENST00000546766 A8MWP4 228 aa6.2□□□□□ -1.42
SLC25A3-204ENST00000546766 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
SLC25A3-204ENST00000546766 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
SLC25A3-204ENST00000546766 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
SLC25A3-204ENST00000546766 NDUFB1O75438 58 aa6.18□□□□□ -1.42
SLC25A3-204ENST00000546766 KRTAP10-1P60331 282 aa6.16□□□□□ -1.42
SLC25A3-204ENST00000546766 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
SLC25A3-204ENST00000546766 SPINK6Q6UWN8 80 aa6.14□□□□□ -1.43
SLC25A3-204ENST00000546766 Q96NJ1 140 aa6.14□□□□□ -1.43
SLC25A3-204ENST00000546766 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
SLC25A3-204ENST00000546766 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
SLC25A3-204ENST00000546766 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 KRTAP21-3Q3LHN1 58 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 LCE6AA0A183 80 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
SLC25A3-204ENST00000546766 MMP24-AS1A0A0U1RRL7 71 aa6.12□□□□□ -1.43
SLC25A3-204ENST00000546766 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
SLC25A3-204ENST00000546766 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
SLC25A3-204ENST00000546766 H0Y9P7 68 aa6.1□□□□□ -1.43
SLC25A3-204ENST00000546766 Q6ZSA8 131 aa6.09□□□□□ -1.43
SLC25A3-204ENST00000546766 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
SLC25A3-204ENST00000546766 LIMD2Q9BT23 127 aa6.09□□□□□ -1.43
SLC25A3-204ENST00000546766 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
SLC25A3-204ENST00000546766 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
SLC25A3-204ENST00000546766 A0A087X002 238 aa6.08□□□□□ -1.44
SLC25A3-204ENST00000546766 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
SLC25A3-204ENST00000546766 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
SLC25A3-204ENST00000546766 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
SLC25A3-204ENST00000546766 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
SLC25A3-204ENST00000546766 Q75L30 129 aa6.06□□□□□ -1.44
SLC25A3-204ENST00000546766 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
SLC25A3-204ENST00000546766 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
SLC25A3-204ENST00000546766 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
SLC25A3-204ENST00000546766 PKD1P98161 4303 aa6.03□□□□□ -1.44
SLC25A3-204ENST00000546766 SPINK7P58062 85 aa6.02□□□□□ -1.45
SLC25A3-204ENST00000546766 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
SLC25A3-204ENST00000546766 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
SLC25A3-204ENST00000546766 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
SLC25A3-204ENST00000546766 PKHD1P08F94 4074 aa6□□□□□ -1.45
SLC25A3-204ENST00000546766 H3BPC8 53 aa6□□□□□ -1.45
SLC25A3-204ENST00000546766 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
SLC25A3-204ENST00000546766 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
SLC25A3-204ENST00000546766 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
SLC25A3-204ENST00000546766 PCOTHQ58A44 107 aa6□□□□□ -1.45
SLC25A3-204ENST00000546766 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
SLC25A3-204ENST00000546766 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
SLC25A3-204ENST00000546766 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
SLC25A3-204ENST00000546766 SACSQ9NZJ4 4579 aa5.98□□□□□ -1.45
SLC25A3-204ENST00000546766 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
SLC25A3-204ENST00000546766 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
SLC25A3-204ENST00000546766 Q5W150 140 aa5.92□□□□□ -1.46
SLC25A3-204ENST00000546766 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
SLC25A3-204ENST00000546766 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
SLC25A3-204ENST00000546766 FAT1Q14517 4588 aa5.89□□□□□ -1.47
SLC25A3-204ENST00000546766 COA5Q86WW8 74 aa5.88□□□□□ -1.47
SLC25A3-204ENST00000546766 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
SLC25A3-204ENST00000546766 SPINK1P00995 79 aa5.87□□□□□ -1.47
SLC25A3-204ENST00000546766 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
SLC25A3-204ENST00000546766 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
SLC25A3-204ENST00000546766 ROMO1P60602 79 aa5.85□□□□□ -1.47
SLC25A3-204ENST00000546766 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
SLC25A3-204ENST00000546766 KRTAP13-3Q3SY46 172 aa5.83□□□□□ -1.48
SLC25A3-204ENST00000546766 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
SLC25A3-204ENST00000546766 LINC01558Q9Y6Z2 57 aa5.81□□□□□ -1.48
SLC25A3-204ENST00000546766 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
SLC25A3-204ENST00000546766 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
SLC25A3-204ENST00000546766 DMBT1Q9UGM3 2413 aaPredicted RBP5.8□□□□□ -1.48
SLC25A3-204ENST00000546766 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
SLC25A3-204ENST00000546766 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
SLC25A3-204ENST00000546766 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
SLC25A3-204ENST00000546766 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
SLC25A3-204ENST00000546766 RYR2Q92736 4967 aa5.78□□□□□ -1.48
SLC25A3-204ENST00000546766 HRES1P13985 223 aa5.78□□□□□ -1.48
SLC25A3-204ENST00000546766 P0C880 135 aa5.77□□□□□ -1.49
SLC25A3-204ENST00000546766 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
SLC25A3-204ENST00000546766 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
SLC25A3-204ENST00000546766 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
SLC25A3-204ENST00000546766 ACYP2P14621 99 aa5.72□□□□□ -1.49
SLC25A3-204ENST00000546766 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
SLC25A3-204ENST00000546766 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
SLC25A3-204ENST00000546766 Q5VSD8 79 aa5.66□□□□□ -1.5
SLC25A3-204ENST00000546766 LRP1Q07954 4544 aaKnown RBP5.66□□□□□ -1.5
SLC25A3-204ENST00000546766 Q8N1X5 172 aa5.64□□□□□ -1.51
SLC25A3-204ENST00000546766 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
SLC25A3-204ENST00000546766 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
SLC25A3-204ENST00000546766 RYR3Q15413 4870 aa5.61□□□□□ -1.51
SLC25A3-204ENST00000546766 A8MUU9 505 aa5.6□□□□□ -1.51
SLC25A3-204ENST00000546766 C20orf166-AS1Q96NR2 134 aa5.6□□□□□ -1.51
SLC25A3-204ENST00000546766 HSPG2P98160 4391 aa5.6□□□□□ -1.51
SLC25A3-204ENST00000546766 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
SLC25A3-204ENST00000546766 KIAA1109Q2LD37 5005 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms