RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CD164Q04900 197 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 SPCS1Q9Y6A9 102 aa3.62□□□□□ -1.83
PRKDC-211ENST00000546304 H3BMG7 143 aa3.61□□□□□ -1.83
PRKDC-211ENST00000546304 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
PRKDC-211ENST00000546304 RETNLBQ9BQ08 111 aa3.61□□□□□ -1.83
PRKDC-211ENST00000546304 LIMD2Q9BT23 127 aa3.61□□□□□ -1.83
PRKDC-211ENST00000546304 H3BT86 120 aa3.6□□□□□ -1.83
PRKDC-211ENST00000546304 K7EP34 96 aa3.6□□□□□ -1.83
PRKDC-211ENST00000546304 BAALC-AS2P0C853 105 aa3.6□□□□□ -1.83
PRKDC-211ENST00000546304 TRBV7-7A0A0K0K1E9 115 aa3.59□□□□□ -1.83
PRKDC-211ENST00000546304 PRR4Q16378 134 aa3.59□□□□□ -1.83
PRKDC-211ENST00000546304 Q5XG85 94 aa3.58□□□□□ -1.84
PRKDC-211ENST00000546304 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
PRKDC-211ENST00000546304 Q6Q795 121 aa3.58□□□□□ -1.84
PRKDC-211ENST00000546304 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
PRKDC-211ENST00000546304 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
PRKDC-211ENST00000546304 RBM3P98179 157 aaKnown RBP3.57□□□□□ -1.84
PRKDC-211ENST00000546304 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
PRKDC-211ENST00000546304 FP248Q71RG6 208 aaPredicted RBP3.57□□□□□ -1.84
PRKDC-211ENST00000546304 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
PRKDC-211ENST00000546304 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
PRKDC-211ENST00000546304 A0A087WSZ3 146 aa3.56□□□□□ -1.84
PRKDC-211ENST00000546304 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
PRKDC-211ENST00000546304 JMJD7-PLA2G4BH0Y9G9 81 aa3.56□□□□□ -1.84
PRKDC-211ENST00000546304 CCKP06307 115 aa3.56□□□□□ -1.84
PRKDC-211ENST00000546304 SS18L2Q9UHA2 77 aa3.56□□□□□ -1.84
PRKDC-211ENST00000546304 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
PRKDC-211ENST00000546304 OBSCN-AS1Q96MR7 158 aa3.55□□□□□ -1.84
PRKDC-211ENST00000546304 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
PRKDC-211ENST00000546304 C14orf132Q9NPU4 83 aa3.55□□□□□ -1.84
PRKDC-211ENST00000546304 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
PRKDC-211ENST00000546304 LOC110117498A0A087WWA1 95 aa3.54□□□□□ -1.84
PRKDC-211ENST00000546304 TPRXLQ17RH7 258 aa3.54□□□□□ -1.84
PRKDC-211ENST00000546304 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
PRKDC-211ENST00000546304 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
PRKDC-211ENST00000546304 Q6ZQT0 140 aa3.54□□□□□ -1.84
PRKDC-211ENST00000546304 PDE6GP18545 87 aa3.53□□□□□ -1.84
PRKDC-211ENST00000546304 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
PRKDC-211ENST00000546304 F8W1H4 67 aa3.51□□□□□ -1.85
PRKDC-211ENST00000546304 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
PRKDC-211ENST00000546304 A0A1B0GV90 55 aa3.5□□□□□ -1.85
PRKDC-211ENST00000546304 FAM240AA0A1B0GVK7 77 aa3.5□□□□□ -1.85
PRKDC-211ENST00000546304 A0A1B0GW54 56 aa3.5□□□□□ -1.85
PRKDC-211ENST00000546304 Q96NJ1 140 aa3.5□□□□□ -1.85
PRKDC-211ENST00000546304 SIGMAR1Q99720 223 aa3.5□□□□□ -1.85
PRKDC-211ENST00000546304 ETDBQ3ZM63 59 aa3.49□□□□□ -1.85
PRKDC-211ENST00000546304 MUC2Q02817 5179 aa3.49□□□□□ -1.85
PRKDC-211ENST00000546304 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
PRKDC-211ENST00000546304 IGKV4-1P06312 121 aa3.47□□□□□ -1.85
PRKDC-211ENST00000546304 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
PRKDC-211ENST00000546304 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
PRKDC-211ENST00000546304 J3KT08 172 aa3.45□□□□□ -1.86
PRKDC-211ENST00000546304 NREPQ16612 68 aa3.44□□□□□ -1.86
PRKDC-211ENST00000546304 A0A1B0GVX0 72 aa3.43□□□□□ -1.86
PRKDC-211ENST00000546304 DSCR10P59022 87 aa3.43□□□□□ -1.86
PRKDC-211ENST00000546304 LINC00846Q9NV44 126 aa3.43□□□□□ -1.86
PRKDC-211ENST00000546304 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
PRKDC-211ENST00000546304 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
PRKDC-211ENST00000546304 A8MWP4 228 aa3.42□□□□□ -1.86
PRKDC-211ENST00000546304 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
PRKDC-211ENST00000546304 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
PRKDC-211ENST00000546304 BPY2O14599 106 aa3.41□□□□□ -1.86
PRKDC-211ENST00000546304 NDUFB1O75438 58 aa3.41□□□□□ -1.86
PRKDC-211ENST00000546304 SCGB1A1P11684 91 aa3.41□□□□□ -1.86
PRKDC-211ENST00000546304 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
PRKDC-211ENST00000546304 IGKV3D-7A0A0C4DH55 119 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 K7EQZ3 153 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 LINC00313P59037 77 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 C4orf26Q17RF5 130 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.87
PRKDC-211ENST00000546304 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
PRKDC-211ENST00000546304 ACYP1P07311 99 aa3.39□□□□□ -1.87
PRKDC-211ENST00000546304 PRR15Q8IV56 129 aa3.39□□□□□ -1.87
PRKDC-211ENST00000546304 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
PRKDC-211ENST00000546304 A8MUU9 505 aa3.38□□□□□ -1.87
PRKDC-211ENST00000546304 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
PRKDC-211ENST00000546304 Q8N9L7 120 aa3.38□□□□□ -1.87
PRKDC-211ENST00000546304 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
PRKDC-211ENST00000546304 MMP24-AS1A0A0U1RRL7 71 aa3.37□□□□□ -1.87
PRKDC-211ENST00000546304 PCOTHQ58A44 107 aa3.37□□□□□ -1.87
PRKDC-211ENST00000546304 OCR1Q9BZK8 76 aa3.37□□□□□ -1.87
PRKDC-211ENST00000546304 J3QR89 54 aa3.36□□□□□ -1.87
PRKDC-211ENST00000546304 NDUFS5O43920 106 aa3.36□□□□□ -1.87
PRKDC-211ENST00000546304 CXCL6P80162 114 aa3.36□□□□□ -1.87
PRKDC-211ENST00000546304 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
PRKDC-211ENST00000546304 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
PRKDC-211ENST00000546304 ATP11AUNQ6ZP68 121 aa3.35□□□□□ -1.87
PRKDC-211ENST00000546304 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
PRKDC-211ENST00000546304 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
PRKDC-211ENST00000546304 hDV103S1A0JD37 113 aa3.34□□□□□ -1.87
PRKDC-211ENST00000546304 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
PRKDC-211ENST00000546304 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
PRKDC-211ENST00000546304 CASC2Q6XLA1 102 aa3.33□□□□□ -1.88
PRKDC-211ENST00000546304 WFDC13Q8IUB5 93 aa3.33□□□□□ -1.88
PRKDC-211ENST00000546304 SMIM20Q8N5G0 67 aa3.33□□□□□ -1.88
PRKDC-211ENST00000546304 MRPL34Q9BQ48 92 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms