RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PCP4P48539 62 aa11.01□□□□□ -0.65
SKP2-208ENST00000546211 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
SKP2-208ENST00000546211 MMP24-AS1A0A0U1RRL7 71 aa11□□□□□ -0.65
SKP2-208ENST00000546211 CASC2Q6XLA1 102 aa11□□□□□ -0.65
SKP2-208ENST00000546211 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
SKP2-208ENST00000546211 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
SKP2-208ENST00000546211 MT1HL1P0DM35 61 aa10.98□□□□□ -0.65
SKP2-208ENST00000546211 C8orf87E5RJ46 101 aa10.97□□□□□ -0.65
SKP2-208ENST00000546211 hDV103S1A0JD37 113 aa10.96□□□□□ -0.65
SKP2-208ENST00000546211 KRTAP29-1A8MX34 341 aaPredicted RBP10.96□□□□□ -0.65
SKP2-208ENST00000546211 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.65
SKP2-208ENST00000546211 TNXBP22105 4242 aa10.96□□□□□ -0.66
SKP2-208ENST00000546211 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
SKP2-208ENST00000546211 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
SKP2-208ENST00000546211 LINC00313P59037 77 aa10.91□□□□□ -0.66
SKP2-208ENST00000546211 SERP2Q8N6R1 65 aa10.91□□□□□ -0.66
SKP2-208ENST00000546211 HERC2O95714 4834 aa10.91□□□□□ -0.66
SKP2-208ENST00000546211 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
SKP2-208ENST00000546211 TRAV7A0A075B6U4 112 aa10.9□□□□□ -0.67
SKP2-208ENST00000546211 TMEM254Q8TBM7 123 aa10.9□□□□□ -0.67
SKP2-208ENST00000546211 MRPL34Q9BQ48 92 aaKnown RBP10.88□□□□□ -0.67
SKP2-208ENST00000546211 OCR1Q9BZK8 76 aa10.87□□□□□ -0.67
SKP2-208ENST00000546211 COX7CP15954 63 aa10.86□□□□□ -0.67
SKP2-208ENST00000546211 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
SKP2-208ENST00000546211 UQCRQO14949 82 aa10.82□□□□□ -0.68
SKP2-208ENST00000546211 NDUFS5O43920 106 aa10.82□□□□□ -0.68
SKP2-208ENST00000546211 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
SKP2-208ENST00000546211 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
SKP2-208ENST00000546211 TP53AIP1Q9HCN2 124 aa10.78□□□□□ -0.68
SKP2-208ENST00000546211 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.68
SKP2-208ENST00000546211 CCDC179H3BU77 68 aa10.77□□□□□ -0.69
SKP2-208ENST00000546211 J3QL48 77 aa10.77□□□□□ -0.69
SKP2-208ENST00000546211 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
SKP2-208ENST00000546211 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
SKP2-208ENST00000546211 DMBT1Q9UGM3 2413 aaPredicted RBP10.73□□□□□ -0.69
SKP2-208ENST00000546211 C5orf47Q569G3 176 aa10.73□□□□□ -0.69
SKP2-208ENST00000546211 IGLV7-46A0A075B6I9 117 aa10.71□□□□□ -0.69
SKP2-208ENST00000546211 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
SKP2-208ENST00000546211 MP68P56378 58 aa10.68□□□□□ -0.7
SKP2-208ENST00000546211 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
SKP2-208ENST00000546211 PRR4Q16378 134 aa10.67□□□□□ -0.7
SKP2-208ENST00000546211 H0Y9P7 68 aa10.66□□□□□ -0.7
SKP2-208ENST00000546211 SNURFQ9Y675 71 aa10.63□□□□□ -0.71
SKP2-208ENST00000546211 A0A0U1RQV1 116 aa10.62□□□□□ -0.71
SKP2-208ENST00000546211 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
SKP2-208ENST00000546211 H3BPC8 53 aa10.6□□□□□ -0.71
SKP2-208ENST00000546211 C20orf166-AS1Q96NR2 134 aa10.6□□□□□ -0.71
SKP2-208ENST00000546211 KRTAP13-3Q3SY46 172 aa10.6□□□□□ -0.71
SKP2-208ENST00000546211 A8MUU9 505 aa10.59□□□□□ -0.71
SKP2-208ENST00000546211 LINC00208Q96KT6 92 aa10.59□□□□□ -0.71
SKP2-208ENST00000546211 Q5W150 140 aa10.58□□□□□ -0.72
SKP2-208ENST00000546211 C1orf64Q8NEQ6 169 aa10.56□□□□□ -0.72
SKP2-208ENST00000546211 ZCCHC13Q8WW36 166 aaKnown RBP10.54□□□□□ -0.72
SKP2-208ENST00000546211 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
SKP2-208ENST00000546211 Q75L30 129 aa10.53□□□□□ -0.72
SKP2-208ENST00000546211 NDUFC1O43677 76 aa10.52□□□□□ -0.73
SKP2-208ENST00000546211 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
SKP2-208ENST00000546211 XP32Q5T750 250 aa10.5□□□□□ -0.73
SKP2-208ENST00000546211 LOC101927531A0A1B0GV80 90 aa10.48□□□□□ -0.73
SKP2-208ENST00000546211 H7BZZ5 65 aa10.46□□□□□ -0.74
SKP2-208ENST00000546211 PCLOQ9Y6V0 5065 aa10.46□□□□□ -0.74
SKP2-208ENST00000546211 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
SKP2-208ENST00000546211 ATP11AUNQ6ZP68 121 aa10.42□□□□□ -0.74
SKP2-208ENST00000546211 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
SKP2-208ENST00000546211 TMEM258P61165 79 aa10.4□□□□□ -0.74
SKP2-208ENST00000546211 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
SKP2-208ENST00000546211 IGKV2D-30A0A075B6S6 120 aa10.38□□□□□ -0.75
SKP2-208ENST00000546211 PCOTHQ58A44 107 aa10.37□□□□□ -0.75
SKP2-208ENST00000546211 C7orf65Q6ZTY9 151 aa10.35□□□□□ -0.75
SKP2-208ENST00000546211 FAM236DA0A1B0GTK5 79 aa10.31□□□□□ -0.76
SKP2-208ENST00000546211 FAM236CP0DP71 79 aa10.31□□□□□ -0.76
SKP2-208ENST00000546211 ATP5EP56381 51 aaPredicted RBP10.28□□□□□ -0.76
SKP2-208ENST00000546211 SPANXA2-OT1Q8N9U9 137 aa10.27□□□□□ -0.76
SKP2-208ENST00000546211 SPINK7P58062 85 aa10.25□□□□□ -0.77
SKP2-208ENST00000546211 LPAP08519 4548 aa10.23□□□□□ -0.77
SKP2-208ENST00000546211 HRES1P13985 223 aa10.23□□□□□ -0.77
SKP2-208ENST00000546211 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
SKP2-208ENST00000546211 LRP2P98164 4655 aa10.15□□□□□ -0.78
SKP2-208ENST00000546211 HERC1Q15751 4861 aa10.14□□□□□ -0.79
SKP2-208ENST00000546211 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
SKP2-208ENST00000546211 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
SKP2-208ENST00000546211 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
SKP2-208ENST00000546211 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
SKP2-208ENST00000546211 ACYP2P14621 99 aa10.02□□□□□ -0.81
SKP2-208ENST00000546211 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
SKP2-208ENST00000546211 A8MUN3 132 aa10.01□□□□□ -0.81
SKP2-208ENST00000546211 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
SKP2-208ENST00000546211 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
SKP2-208ENST00000546211 COA5Q86WW8 74 aa9.97□□□□□ -0.81
SKP2-208ENST00000546211 MUC17Q685J3 4493 aa9.95□□□□□ -0.82
SKP2-208ENST00000546211 KRTAP3-1Q9BYR8 98 aa9.92□□□□□ -0.82
SKP2-208ENST00000546211 RBM12B-AS1Q9P1G2 102 aa9.91□□□□□ -0.82
SKP2-208ENST00000546211 CHKB-CPT1BH3BT56 60 aa9.88□□□□□ -0.83
SKP2-208ENST00000546211 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
SKP2-208ENST00000546211 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
SKP2-208ENST00000546211 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SKP2-208ENST00000546211 H1FX-AS1Q4G0G2 97 aa9.77□□□□□ -0.85
SKP2-208ENST00000546211 SPTSSBQ8NFR3 76 aa9.71□□□□□ -0.86
SKP2-208ENST00000546211 S4R3F8 94 aa9.7□□□□□ -0.86
SKP2-208ENST00000546211 LCA10Q71F78 164 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms