RNA–Protein interactions for RNA: ENST00000544814.5

SSUH2-217, Transcript of ssu-2 homolog (C. elegans), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSUH2, Length 1,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-217ENST00000544814 A0A087WVE0 104 aa12.26□□□□□ -0.45
SSUH2-217ENST00000544814 A0A1B0GVX0 72 aa12.26□□□□□ -0.45
SSUH2-217ENST00000544814 DMBT1Q9UGM3 2413 aaPredicted RBP12.25□□□□□ -0.45
SSUH2-217ENST00000544814 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
SSUH2-217ENST00000544814 RETNLBQ9BQ08 111 aa12.23□□□□□ -0.45
SSUH2-217ENST00000544814 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
SSUH2-217ENST00000544814 C8orf87E5RJ46 101 aa12.17□□□□□ -0.46
SSUH2-217ENST00000544814 FP248Q71RG6 208 aaPredicted RBP12.17□□□□□ -0.46
SSUH2-217ENST00000544814 C8orf17Q9NRJ1 99 aa12.17□□□□□ -0.46
SSUH2-217ENST00000544814 MMP24-AS1A0A0U1RRL7 71 aa12.13□□□□□ -0.47
SSUH2-217ENST00000544814 FAM236AA0A1B0GUQ0 79 aa12.13□□□□□ -0.47
SSUH2-217ENST00000544814 FAM236BA0A1B0GV22 79 aa12.13□□□□□ -0.47
SSUH2-217ENST00000544814 LINC00313P59037 77 aa12.13□□□□□ -0.47
SSUH2-217ENST00000544814 CASC2Q6XLA1 102 aa12.11□□□□□ -0.47
SSUH2-217ENST00000544814 WFDC13Q8IUB5 93 aa12.11□□□□□ -0.47
SSUH2-217ENST00000544814 SCGB1A1P11684 91 aa12.11□□□□□ -0.47
SSUH2-217ENST00000544814 NOTCH2NLQ7Z3S9 236 aa12.11□□□□□ -0.47
SSUH2-217ENST00000544814 hDV103S1A0JD37 113 aa12.1□□□□□ -0.47
SSUH2-217ENST00000544814 IGLV7-46A0A075B6I9 117 aa12.06□□□□□ -0.48
SSUH2-217ENST00000544814 PRR4Q16378 134 aa12.04□□□□□ -0.48
SSUH2-217ENST00000544814 TMEM254Q8TBM7 123 aa12.04□□□□□ -0.48
SSUH2-217ENST00000544814 MRPL34Q9BQ48 92 aaKnown RBP12.02□□□□□ -0.49
SSUH2-217ENST00000544814 ATOX1O00244 68 aa12□□□□□ -0.49
SSUH2-217ENST00000544814 C9orf92A6NGG3 77 aa12□□□□□ -0.49
SSUH2-217ENST00000544814 PCLOQ9Y6V0 5065 aa11.99□□□□□ -0.49
SSUH2-217ENST00000544814 KRTAP16-1A8MUX0 517 aa11.97□□□□□ -0.49
SSUH2-217ENST00000544814 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
SSUH2-217ENST00000544814 NDUFS5O43920 106 aa11.93□□□□□ -0.5
SSUH2-217ENST00000544814 KRTAP13-3Q3SY46 172 aa11.93□□□□□ -0.5
SSUH2-217ENST00000544814 Q8N9P0 234 aaPredicted RBP11.91□□□□□ -0.5
SSUH2-217ENST00000544814 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
SSUH2-217ENST00000544814 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
SSUH2-217ENST00000544814 TPRXLQ17RH7 258 aa11.88□□□□□ -0.51
SSUH2-217ENST00000544814 ANAPC13Q9BS18 74 aa11.87□□□□□ -0.51
SSUH2-217ENST00000544814 TRAV7A0A075B6U4 112 aa11.86□□□□□ -0.51
SSUH2-217ENST00000544814 UQCRQO14949 82 aa11.84□□□□□ -0.51
SSUH2-217ENST00000544814 SERP2Q8N6R1 65 aa11.84□□□□□ -0.51
SSUH2-217ENST00000544814 C20orf166-AS1Q96NR2 134 aa11.84□□□□□ -0.51
SSUH2-217ENST00000544814 A8MUU9 505 aa11.82□□□□□ -0.52
SSUH2-217ENST00000544814 XP32Q5T750 250 aa11.78□□□□□ -0.52
SSUH2-217ENST00000544814 Q75L30 129 aa11.78□□□□□ -0.52
SSUH2-217ENST00000544814 COX7CP15954 63 aa11.75□□□□□ -0.53
SSUH2-217ENST00000544814 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
SSUH2-217ENST00000544814 TRAV22A0A0B4J277 110 aa11.72□□□□□ -0.53
SSUH2-217ENST00000544814 RPL37P61927 97 aaKnown RBP11.71□□□□□ -0.54
SSUH2-217ENST00000544814 MP68P56378 58 aa11.7□□□□□ -0.54
SSUH2-217ENST00000544814 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
SSUH2-217ENST00000544814 H0Y9P7 68 aa11.69□□□□□ -0.54
SSUH2-217ENST00000544814 Q5W150 140 aa11.69□□□□□ -0.54
SSUH2-217ENST00000544814 HERC1Q15751 4861 aa11.67□□□□□ -0.54
SSUH2-217ENST00000544814 PCP4P48539 62 aa11.66□□□□□ -0.54
SSUH2-217ENST00000544814 ATP11AUNQ6ZP68 121 aa11.66□□□□□ -0.54
SSUH2-217ENST00000544814 H3BPC8 53 aa11.63□□□□□ -0.55
SSUH2-217ENST00000544814 C20orf197Q8N268 126 aa11.62□□□□□ -0.55
SSUH2-217ENST00000544814 LINC00208Q96KT6 92 aa11.6□□□□□ -0.55
SSUH2-217ENST00000544814 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
SSUH2-217ENST00000544814 C1orf64Q8NEQ6 169 aa11.58□□□□□ -0.56
SSUH2-217ENST00000544814 LPAP08519 4548 aa11.58□□□□□ -0.56
SSUH2-217ENST00000544814 A0A0U1RQV1 116 aa11.57□□□□□ -0.56
SSUH2-217ENST00000544814 LOC101927531A0A1B0GV80 90 aa11.55□□□□□ -0.56
SSUH2-217ENST00000544814 HMCN2Q8NDA2 5059 aa11.55□□□□□ -0.56
SSUH2-217ENST00000544814 SNURFQ9Y675 71 aa11.54□□□□□ -0.56
SSUH2-217ENST00000544814 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
SSUH2-217ENST00000544814 IGKV2-30P06310 120 aa11.5□□□□□ -0.57
SSUH2-217ENST00000544814 SEC61BP60468 96 aaKnown RBP11.5□□□□□ -0.57
SSUH2-217ENST00000544814 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
SSUH2-217ENST00000544814 LRP2P98164 4655 aa11.49□□□□□ -0.57
SSUH2-217ENST00000544814 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
SSUH2-217ENST00000544814 CYP4F30PQ9H0H9 118 aa11.46□□□□□ -0.57
SSUH2-217ENST00000544814 C7orf65Q6ZTY9 151 aa11.46□□□□□ -0.58
SSUH2-217ENST00000544814 NDUFC1O43677 76 aa11.42□□□□□ -0.58
SSUH2-217ENST00000544814 SPINK7P58062 85 aa11.42□□□□□ -0.58
SSUH2-217ENST00000544814 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
SSUH2-217ENST00000544814 H7BZZ5 65 aa11.33□□□□□ -0.6
SSUH2-217ENST00000544814 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
SSUH2-217ENST00000544814 HRES1P13985 223 aa11.27□□□□□ -0.61
SSUH2-217ENST00000544814 SPANXA2-OT1Q8N9U9 137 aa11.23□□□□□ -0.61
SSUH2-217ENST00000544814 TMEM258P61165 79 aa11.2□□□□□ -0.62
SSUH2-217ENST00000544814 C4orf26Q17RF5 130 aa11.18□□□□□ -0.62
SSUH2-217ENST00000544814 KRTAP4-1Q9BYQ7 146 aa11.17□□□□□ -0.62
SSUH2-217ENST00000544814 FAM236DA0A1B0GTK5 79 aa11.13□□□□□ -0.63
SSUH2-217ENST00000544814 FAM236CP0DP71 79 aa11.13□□□□□ -0.63
SSUH2-217ENST00000544814 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
SSUH2-217ENST00000544814 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
SSUH2-217ENST00000544814 RBM12B-AS1Q9P1G2 102 aa11.09□□□□□ -0.63
SSUH2-217ENST00000544814 MPLKIPQ8TAP9 179 aa11.08□□□□□ -0.64
SSUH2-217ENST00000544814 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
SSUH2-217ENST00000544814 A8MUN3 132 aa11.05□□□□□ -0.64
SSUH2-217ENST00000544814 UBR4Q5T4S7 5183 aa11.03□□□□□ -0.64
SSUH2-217ENST00000544814 KRTAP3-1Q9BYR8 98 aa11.01□□□□□ -0.65
SSUH2-217ENST00000544814 ACYP2P14621 99 aa11□□□□□ -0.65
SSUH2-217ENST00000544814 MUC2Q02817 5179 aa10.91□□□□□ -0.66
SSUH2-217ENST00000544814 H1FX-AS1Q4G0G2 97 aa10.91□□□□□ -0.66
SSUH2-217ENST00000544814 RNF213Q63HN8 5207 aa10.9□□□□□ -0.66
SSUH2-217ENST00000544814 COA5Q86WW8 74 aa10.87□□□□□ -0.67
SSUH2-217ENST00000544814 SERP1Q9Y6X1 66 aa10.86□□□□□ -0.67
SSUH2-217ENST00000544814 KRTAP19-2Q3LHN2 52 aa10.84□□□□□ -0.67
SSUH2-217ENST00000544814 CHKB-CPT1BH3BT56 60 aa10.83□□□□□ -0.68
SSUH2-217ENST00000544814 S4R3F8 94 aa10.76□□□□□ -0.69
SSUH2-217ENST00000544814 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms